RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 GALTP07902 379 aa10.46□□□□□ -0.73
SF3B3-211ENST00000568291 ZSCAN22P10073 491 aaPredicted RBP10.46□□□□□ -0.73
SF3B3-211ENST00000568291 MYBP10242 640 aa10.46□□□□□ -0.73
SF3B3-211ENST00000568291 HARSP12081 509 aaKnown RBP10.46□□□□□ -0.73
SF3B3-211ENST00000568291 SKIP12755 728 aa10.46□□□□□ -0.73
SF3B3-211ENST00000568291 AXLP30530 894 aa10.46□□□□□ -0.73
SF3B3-211ENST00000568291 KCNC3Q14003 757 aa10.46□□□□□ -0.73
SF3B3-211ENST00000568291 SLC39A14Q15043 492 aa10.46□□□□□ -0.73
SF3B3-211ENST00000568291 PPP2R5AQ15172 486 aa10.46□□□□□ -0.73
SF3B3-211ENST00000568291 STK38Q15208 465 aa10.46□□□□□ -0.73
SF3B3-211ENST00000568291 PTPN21Q16825 1174 aa10.46□□□□□ -0.73
SF3B3-211ENST00000568291 SEZ6Q53EL9 994 aa10.46□□□□□ -0.73
SF3B3-211ENST00000568291 ATF7IP2Q5U623 682 aa10.46□□□□□ -0.73
SF3B3-211ENST00000568291 SYCE2Q6PIF2 218 aa10.46□□□□□ -0.73
SF3B3-211ENST00000568291 DYMQ7RTS9 669 aa10.46□□□□□ -0.73
SF3B3-211ENST00000568291 TAS1R1Q7RTX1 841 aa10.46□□□□□ -0.73
SF3B3-211ENST00000568291 TMC7Q7Z402 723 aa10.46□□□□□ -0.73
SF3B3-211ENST00000568291 TMEM130Q8N3G9 435 aa10.46□□□□□ -0.73
SF3B3-211ENST00000568291 PDILTQ8N807 584 aa10.46□□□□□ -0.73
SF3B3-211ENST00000568291 CEP120Q8N960 986 aa10.46□□□□□ -0.73
SF3B3-211ENST00000568291 GSTCDQ8NEC7 633 aa10.46□□□□□ -0.73
SF3B3-211ENST00000568291 URGCPQ8TCY9 931 aa10.46□□□□□ -0.73
SF3B3-211ENST00000568291 RAD54LQ92698 747 aa10.46□□□□□ -0.73
SF3B3-211ENST00000568291 STAMQ92783 540 aa10.46□□□□□ -0.73
SF3B3-211ENST00000568291 B3GALT6Q96L58 329 aa10.46□□□□□ -0.73
SF3B3-211ENST00000568291 AK8Q96MA6 479 aa10.46□□□□□ -0.73
SF3B3-211ENST00000568291 PHOX2BQ99453 314 aa10.46□□□□□ -0.73
SF3B3-211ENST00000568291 REEP2Q9BRK0 252 aa10.46□□□□□ -0.73
SF3B3-211ENST00000568291 VN1R3Q9BXE9 311 aa10.46□□□□□ -0.73
SF3B3-211ENST00000568291 NT5C3AQ9H0P0 336 aa10.46□□□□□ -0.73
SF3B3-211ENST00000568291 C2orf40Q9H1Z8 148 aa10.46□□□□□ -0.73
SF3B3-211ENST00000568291 IKZF4Q9H2S9 585 aa10.46□□□□□ -0.73
SF3B3-211ENST00000568291 ZSCAN16Q9H4T2 348 aaPredicted RBP10.46□□□□□ -0.73
SF3B3-211ENST00000568291 NGRNQ9NPE2 291 aaKnown RBP10.46□□□□□ -0.73
SF3B3-211ENST00000568291 SRPRBQ9Y5M8 271 aaKnown RBP10.46□□□□□ -0.73
SF3B3-211ENST00000568291 CNTNAP2Q9UHC6 1331 aa10.45□□□□□ -0.74
SF3B3-211ENST00000568291 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.45□□□□□ -0.74
SF3B3-211ENST00000568291 NRP1O14786 923 aa10.45□□□□□ -0.74
SF3B3-211ENST00000568291 CXCL14O95715 111 aa10.45□□□□□ -0.74
SF3B3-211ENST00000568291 BMP15O95972 392 aa10.45□□□□□ -0.74
SF3B3-211ENST00000568291 F13A1P00488 732 aa10.45□□□□□ -0.74
SF3B3-211ENST00000568291 KRT18P05783 430 aaKnown RBP10.45□□□□□ -0.74
SF3B3-211ENST00000568291 PLS3P13797 630 aa10.45□□□□□ -0.74
SF3B3-211ENST00000568291 GUCY2CP25092 1073 aa10.45□□□□□ -0.74
SF3B3-211ENST00000568291 OR1G1P47890 313 aa10.45□□□□□ -0.74
SF3B3-211ENST00000568291 VCPP55072 806 aaKnown RBP10.45□□□□□ -0.74
SF3B3-211ENST00000568291 KRT17Q04695 432 aa10.45□□□□□ -0.74
SF3B3-211ENST00000568291 DNM1Q05193 864 aaKnown RBP10.45□□□□□ -0.74
SF3B3-211ENST00000568291 GIT2Q14161 759 aa10.45□□□□□ -0.74
SF3B3-211ENST00000568291 SMC1AQ14683 1233 aaKnown RBP10.45□□□□□ -0.74
SF3B3-211ENST00000568291 FAM187BQ17R55 369 aa10.45□□□□□ -0.74
SF3B3-211ENST00000568291 GLRA4Q5JXX5 417 aa10.45□□□□□ -0.74
SF3B3-211ENST00000568291 IER5LQ5T953 404 aa10.45□□□□□ -0.74
SF3B3-211ENST00000568291 TMEM184AQ6ZMB5 413 aa10.45□□□□□ -0.74
SF3B3-211ENST00000568291 VPS52Q8N1B4 723 aa10.45□□□□□ -0.74
SF3B3-211ENST00000568291 MYCT1Q8N699 235 aa10.45□□□□□ -0.74
SF3B3-211ENST00000568291 KRI1Q8N9T8 703 aaKnown RBP10.45□□□□□ -0.74
SF3B3-211ENST00000568291 LINC00301Q8NCQ3 95 aa10.45□□□□□ -0.74
SF3B3-211ENST00000568291 FEZF2Q8TBJ5 459 aa10.45□□□□□ -0.74
SF3B3-211ENST00000568291 CASP10Q92851 521 aa10.45□□□□□ -0.74
SF3B3-211ENST00000568291 ASIC4Q96FT7 647 aa10.45□□□□□ -0.74
SF3B3-211ENST00000568291 DRC1Q96MC2 740 aa10.45□□□□□ -0.74
SF3B3-211ENST00000568291 FAM193BQ96PV7 902 aaPredicted RBP10.45□□□□□ -0.74
SF3B3-211ENST00000568291 PRRX2Q99811 253 aa10.45□□□□□ -0.74
SF3B3-211ENST00000568291 PAAF1Q9BRP4 392 aa10.45□□□□□ -0.74
SF3B3-211ENST00000568291 MRPL9Q9BYD2 267 aaKnown RBP10.45□□□□□ -0.74
SF3B3-211ENST00000568291 S1PR5Q9H228 398 aa10.45□□□□□ -0.74
SF3B3-211ENST00000568291 TSHZ2Q9NRE2 1034 aa10.45□□□□□ -0.74
SF3B3-211ENST00000568291 CDH22Q9UJ99 828 aa10.45□□□□□ -0.74
SF3B3-211ENST00000568291 ZDHHC9Q9Y397 364 aa10.45□□□□□ -0.74
SF3B3-211ENST00000568291 WDFY4Q6ZS81 3184 aa10.44□□□□□ -0.74
SF3B3-211ENST00000568291 C2orf71A6NGG8 1288 aa10.44□□□□□ -0.74
SF3B3-211ENST00000568291 C2CD2LO14523 706 aa10.44□□□□□ -0.74
SF3B3-211ENST00000568291 N4BP3O15049 544 aa10.44□□□□□ -0.74
SF3B3-211ENST00000568291 SPTLC2O15270 562 aa10.44□□□□□ -0.74
SF3B3-211ENST00000568291 RECQL4O94761 1208 aa10.44□□□□□ -0.74
SF3B3-211ENST00000568291 ALDH2P05091 517 aa10.44□□□□□ -0.74
SF3B3-211ENST00000568291 HOXB8P17481 243 aaPredicted RBP10.44□□□□□ -0.74
SF3B3-211ENST00000568291 NMT1P30419 496 aaKnown RBP10.44□□□□□ -0.74
SF3B3-211ENST00000568291 DDIT3P35638 169 aa10.44□□□□□ -0.74
SF3B3-211ENST00000568291 NASPP49321 788 aaPredicted RBP10.44□□□□□ -0.74
SF3B3-211ENST00000568291 EFNA5P52803 228 aa10.44□□□□□ -0.74
SF3B3-211ENST00000568291 TCF15Q12870 199 aa10.44□□□□□ -0.74
SF3B3-211ENST00000568291 DMP1Q13316 513 aaPredicted RBP10.44□□□□□ -0.74
SF3B3-211ENST00000568291 ZC2HC1CQ53FD0 456 aaPredicted RBP10.44□□□□□ -0.74
SF3B3-211ENST00000568291 RRAGBQ5VZM2 374 aa10.44□□□□□ -0.74
SF3B3-211ENST00000568291 KANK3Q6NY19 840 aa10.44□□□□□ -0.74
SF3B3-211ENST00000568291 COLGALT2Q8IYK4 626 aa10.44□□□□□ -0.74
SF3B3-211ENST00000568291 TMEM161BQ8NDZ6 487 aa10.44□□□□□ -0.74
SF3B3-211ENST00000568291 CNNM3Q8NE01 707 aa10.44□□□□□ -0.74
SF3B3-211ENST00000568291 HASPINQ8TF76 798 aa10.44□□□□□ -0.74
SF3B3-211ENST00000568291 CCDC51Q96ER9 411 aa10.44□□□□□ -0.74
SF3B3-211ENST00000568291 TMEM169Q96HH4 297 aa10.44□□□□□ -0.74
SF3B3-211ENST00000568291 IGSF21Q96ID5 467 aa10.44□□□□□ -0.74
SF3B3-211ENST00000568291 ZNF396Q96N95 335 aaPredicted RBP10.44□□□□□ -0.74
SF3B3-211ENST00000568291 ACO2Q99798 780 aaKnown RBP10.44□□□□□ -0.74
SF3B3-211ENST00000568291 TCHPQ9BT92 498 aa10.44□□□□□ -0.74
SF3B3-211ENST00000568291 CCSER1Q9C0I3 900 aa10.44□□□□□ -0.74
SF3B3-211ENST00000568291 TBC1D7Q9P0N9 293 aa10.44□□□□□ -0.74
SF3B3-211ENST00000568291 ARHGAP28Q9P2N2 729 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms