RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 PYGBP11216 843 aa13.13□□□□□ -0.31
CSPG4P13-202ENST00000567704 MAGEA4P43358 317 aa13.13□□□□□ -0.31
CSPG4P13-202ENST00000567704 TMED10P49755 219 aaKnown RBP13.13□□□□□ -0.31
CSPG4P13-202ENST00000567704 KPNB1Q14974 876 aaKnown RBP13.13□□□□□ -0.31
CSPG4P13-202ENST00000567704 KIF19Q2TAC6 998 aa13.13□□□□□ -0.31
CSPG4P13-202ENST00000567704 KRT39Q6A163 491 aa13.13□□□□□ -0.31
CSPG4P13-202ENST00000567704 GALNT4Q8N4A0 578 aa13.13□□□□□ -0.31
CSPG4P13-202ENST00000567704 SLC38A10Q9HBR0 1119 aa13.13□□□□□ -0.31
CSPG4P13-202ENST00000567704 PSMC3IPQ9P2W1 217 aaPredicted RBP13.13□□□□□ -0.31
CSPG4P13-202ENST00000567704 KPNA7A9QM74 516 aa13.13□□□□□ -0.31
CSPG4P13-202ENST00000567704 ZBTB5O15062 677 aa13.13□□□□□ -0.31
CSPG4P13-202ENST00000567704 MED7O43513 233 aa13.13□□□□□ -0.31
CSPG4P13-202ENST00000567704 ANXA13P27216 316 aa13.13□□□□□ -0.31
CSPG4P13-202ENST00000567704 NMT1P30419 496 aaKnown RBP13.13□□□□□ -0.31
CSPG4P13-202ENST00000567704 TFDP2Q14188 446 aa13.13□□□□□ -0.31
CSPG4P13-202ENST00000567704 NBPF20Q3BBV1 942 aa13.13□□□□□ -0.31
CSPG4P13-202ENST00000567704 SWT1Q5T5J6 900 aaKnown RBP13.13□□□□□ -0.31
CSPG4P13-202ENST00000567704 APLFQ8IW19 511 aaPredicted RBP13.13□□□□□ -0.31
CSPG4P13-202ENST00000567704 DCLRE1BQ9H816 532 aa13.13□□□□□ -0.31
CSPG4P13-202ENST00000567704 ZNF277Q9NRM2 450 aaPredicted RBP13.13□□□□□ -0.31
CSPG4P13-202ENST00000567704 LEMD3Q9Y2U8 911 aa13.13□□□□□ -0.31
CSPG4P13-202ENST00000567704 CYP27B1O15528 508 aa13.13□□□□□ -0.31
CSPG4P13-202ENST00000567704 KPNA2P52292 529 aaKnown RBP13.13□□□□□ -0.31
CSPG4P13-202ENST00000567704 ATXN3P54252 364 aaPredicted RBP13.13□□□□□ -0.31
CSPG4P13-202ENST00000567704 OSTNP61366 133 aa13.13□□□□□ -0.31
CSPG4P13-202ENST00000567704 MAPK7Q13164 816 aa13.13□□□□□ -0.31
CSPG4P13-202ENST00000567704 SYCP2LQ5T4T6 812 aa13.13□□□□□ -0.31
CSPG4P13-202ENST00000567704 SYDE2Q5VT97 1194 aa13.13□□□□□ -0.31
CSPG4P13-202ENST00000567704 ZBTB33Q86T24 672 aa13.13□□□□□ -0.31
CSPG4P13-202ENST00000567704 C7orf31Q8N865 590 aa13.13□□□□□ -0.31
CSPG4P13-202ENST00000567704 CEP95Q96GE4 821 aa13.13□□□□□ -0.31
CSPG4P13-202ENST00000567704 ANKRD36BP1Q96IX9 119 aa13.13□□□□□ -0.31
CSPG4P13-202ENST00000567704 SERPINB12Q96P63 405 aa13.13□□□□□ -0.31
CSPG4P13-202ENST00000567704 NAGPAQ9UK23 515 aa13.13□□□□□ -0.31
CSPG4P13-202ENST00000567704 MTO1Q9Y2Z2 717 aaKnown RBP13.13□□□□□ -0.31
CSPG4P13-202ENST00000567704 SSTR3P32745 418 aaPredicted RBP13.13□□□□□ -0.31
CSPG4P13-202ENST00000567704 PADI6Q6TGC4 694 aa13.13□□□□□ -0.31
CSPG4P13-202ENST00000567704 SYDE1Q6ZW31 735 aaPredicted RBP13.13□□□□□ -0.31
CSPG4P13-202ENST00000567704 MYLK4Q86YV6 388 aaPredicted RBP13.13□□□□□ -0.31
CSPG4P13-202ENST00000567704 TBC1D23Q9NUY8 699 aa13.13□□□□□ -0.31
CSPG4P13-202ENST00000567704 GTSE1Q9NYZ3 720 aa13.13□□□□□ -0.31
CSPG4P13-202ENST00000567704 USP17L10C9JJH3 530 aa13.12□□□□□ -0.31
CSPG4P13-202ENST00000567704 TMEM253P0C7T8 217 aa13.12□□□□□ -0.31
CSPG4P13-202ENST00000567704 PDIA5Q14554 519 aa13.12□□□□□ -0.31
CSPG4P13-202ENST00000567704 EAPPQ56P03 285 aaPredicted RBP13.12□□□□□ -0.31
CSPG4P13-202ENST00000567704 TEDDM1Q5T9Z0 273 aa13.12□□□□□ -0.31
CSPG4P13-202ENST00000567704 NLRP9Q7RTR0 991 aa13.12□□□□□ -0.31
CSPG4P13-202ENST00000567704 MTMR8Q96EF0 704 aa13.12□□□□□ -0.31
CSPG4P13-202ENST00000567704 ASCC2Q9H1I8 757 aaPredicted RBP13.12□□□□□ -0.31
CSPG4P13-202ENST00000567704 CARD9Q9H257 536 aa13.12□□□□□ -0.31
CSPG4P13-202ENST00000567704 SNX5Q9Y5X3 404 aa13.12□□□□□ -0.31
CSPG4P13-202ENST00000567704 ANKARQ7Z5J8 1434 aa13.12□□□□□ -0.31
CSPG4P13-202ENST00000567704 TCP10L2B9ZVM9 353 aa13.12□□□□□ -0.31
CSPG4P13-202ENST00000567704 SLC16A4O15374 487 aa13.12□□□□□ -0.31
CSPG4P13-202ENST00000567704 TAF1BQ53T94 588 aaPredicted RBP13.12□□□□□ -0.31
CSPG4P13-202ENST00000567704 TTMPQ5BVD1 217 aa13.12□□□□□ -0.31
CSPG4P13-202ENST00000567704 RYBPQ8N488 228 aaPredicted RBP13.12□□□□□ -0.31
CSPG4P13-202ENST00000567704 CATSPER1Q8NEC5 780 aa13.12□□□□□ -0.31
CSPG4P13-202ENST00000567704 ATP6V1E2Q96A05 226 aa13.12□□□□□ -0.31
CSPG4P13-202ENST00000567704 PNPLA7Q6ZV29 1317 aa13.12□□□□□ -0.31
CSPG4P13-202ENST00000567704 LOC102724428A0A0B4J2F2 783 aa13.12□□□□□ -0.31
CSPG4P13-202ENST00000567704 LOC100653049A0A140TA62 436 aa13.12□□□□□ -0.31
CSPG4P13-202ENST00000567704 SYCE1LA8MT33 242 aa13.12□□□□□ -0.31
CSPG4P13-202ENST00000567704 F5H423 210 aaPredicted RBP13.12□□□□□ -0.31
CSPG4P13-202ENST00000567704 KRT34O76011 436 aa13.12□□□□□ -0.31
CSPG4P13-202ENST00000567704 SIK1P57059 783 aa13.12□□□□□ -0.31
CSPG4P13-202ENST00000567704 AP3B2Q13367 1082 aa13.12□□□□□ -0.31
CSPG4P13-202ENST00000567704 DLGAP5Q15398 846 aa13.12□□□□□ -0.31
CSPG4P13-202ENST00000567704 MTERF2Q49AM1 385 aa13.12□□□□□ -0.31
CSPG4P13-202ENST00000567704 ZNF507Q8TCN5 953 aa13.12□□□□□ -0.31
CSPG4P13-202ENST00000567704 SYN2Q92777 582 aaPredicted RBP13.12□□□□□ -0.31
CSPG4P13-202ENST00000567704 TRIM15Q9C019 465 aa13.12□□□□□ -0.31
CSPG4P13-202ENST00000567704 HEY2Q9UBP5 337 aa13.12□□□□□ -0.31
CSPG4P13-202ENST00000567704 APEX2Q9UBZ4 518 aa13.12□□□□□ -0.31
CSPG4P13-202ENST00000567704 TSC22D4Q9Y3Q8 395 aa13.12□□□□□ -0.31
CSPG4P13-202ENST00000567704 INO80B-WBP1J3KQ70 363 aa13.11□□□□□ -0.31
CSPG4P13-202ENST00000567704 FOXP2O15409 715 aa13.11□□□□□ -0.31
CSPG4P13-202ENST00000567704 ATMINO43313 823 aaPredicted RBP13.11□□□□□ -0.31
CSPG4P13-202ENST00000567704 RFX1P22670 979 aa13.11□□□□□ -0.31
CSPG4P13-202ENST00000567704 COILP38432 576 aaPredicted RBP13.11□□□□□ -0.31
CSPG4P13-202ENST00000567704 TTI2Q6NXR4 508 aa13.11□□□□□ -0.31
CSPG4P13-202ENST00000567704 C8orf37Q96NL8 207 aa13.11□□□□□ -0.31
CSPG4P13-202ENST00000567704 POLR3CQ9BUI4 534 aaPredicted RBP13.11□□□□□ -0.31
CSPG4P13-202ENST00000567704 INO80BQ9C086 356 aaPredicted RBP13.11□□□□□ -0.31
CSPG4P13-202ENST00000567704 CHCHD3Q9NX63 227 aaKnown RBP13.11□□□□□ -0.31
CSPG4P13-202ENST00000567704 SLC9A2Q9UBY0 812 aa13.11□□□□□ -0.31
CSPG4P13-202ENST00000567704 XPO1O14980 1071 aaKnown RBP13.11□□□□□ -0.31
CSPG4P13-202ENST00000567704 AP1G2O75843 785 aa13.11□□□□□ -0.31
CSPG4P13-202ENST00000567704 ZFXP17010 805 aaPredicted RBP13.11□□□□□ -0.31
CSPG4P13-202ENST00000567704 TYK2P29597 1187 aa13.11□□□□□ -0.31
CSPG4P13-202ENST00000567704 STX3Q13277 289 aa13.11□□□□□ -0.31
CSPG4P13-202ENST00000567704 ACBD5Q5T8D3 534 aaPredicted RBP13.11□□□□□ -0.31
CSPG4P13-202ENST00000567704 KIAA2013Q8IYS2 634 aa13.11□□□□□ -0.31
CSPG4P13-202ENST00000567704 B4GALNT2Q8NHY0 566 aa13.11□□□□□ -0.31
CSPG4P13-202ENST00000567704 EME1Q96AY2 570 aa13.11□□□□□ -0.31
CSPG4P13-202ENST00000567704 C18orf8Q96DM3 657 aa13.11□□□□□ -0.31
CSPG4P13-202ENST00000567704 CEP19Q96LK0 163 aa13.11□□□□□ -0.31
CSPG4P13-202ENST00000567704 PPP1R36Q96LQ0 422 aa13.11□□□□□ -0.31
CSPG4P13-202ENST00000567704 EPB41L4AQ9HCS5 686 aaPredicted RBP13.11□□□□□ -0.31
CSPG4P13-202ENST00000567704 PALMDQ9NP74 551 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms