RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 SPDYE7PQ495Y7 208 aa4.72□□□□□ -1.65
CDH1-211ENST00000567320 PRAMEF14Q5SWL7 426 aa4.72□□□□□ -1.65
CDH1-211ENST00000567320 ATXN7L2Q5T6C5 722 aaPredicted RBP4.72□□□□□ -1.65
CDH1-211ENST00000567320 HDGFL2Q7Z4V5 671 aaPredicted RBP4.72□□□□□ -1.65
CDH1-211ENST00000567320 RASSF3Q86WH2 238 aa4.72□□□□□ -1.65
CDH1-211ENST00000567320 LYSMD2Q8IV50 215 aa4.72□□□□□ -1.65
CDH1-211ENST00000567320 SLC44A3Q8N4M1 653 aa4.72□□□□□ -1.65
CDH1-211ENST00000567320 ZNF480Q8WV37 535 aa4.72□□□□□ -1.65
CDH1-211ENST00000567320 USP7Q93009 1102 aa4.72□□□□□ -1.65
CDH1-211ENST00000567320 EAF2Q96CJ1 260 aaPredicted RBP4.72□□□□□ -1.65
CDH1-211ENST00000567320 MFSD3Q96ES6 412 aa4.72□□□□□ -1.65
CDH1-211ENST00000567320 CEP95Q96GE4 821 aa4.72□□□□□ -1.65
CDH1-211ENST00000567320 PRDM12Q9H4Q4 367 aa4.72□□□□□ -1.65
CDH1-211ENST00000567320 SYNPO2LQ9H987 977 aa4.72□□□□□ -1.65
CDH1-211ENST00000567320 INSL6Q9Y581 213 aa4.72□□□□□ -1.65
CDH1-211ENST00000567320 PCSK5Q92824 1860 aa4.72□□□□□ -1.65
CDH1-211ENST00000567320 PIPSLA2A3N6 862 aa4.71□□□□□ -1.66
CDH1-211ENST00000567320 AKR1B10O60218 316 aa4.71□□□□□ -1.66
CDH1-211ENST00000567320 TMEM127O75204 238 aa4.71□□□□□ -1.66
CDH1-211ENST00000567320 ADSLP30566 484 aaPredicted RBP4.71□□□□□ -1.66
CDH1-211ENST00000567320 SEC24CP53992 1094 aa4.71□□□□□ -1.66
CDH1-211ENST00000567320 C21orf58P58505 322 aa4.71□□□□□ -1.66
CDH1-211ENST00000567320 CCT2P78371 535 aaKnown RBP4.71□□□□□ -1.66
CDH1-211ENST00000567320 CDK17Q00537 523 aa4.71□□□□□ -1.66
CDH1-211ENST00000567320 CSRP2Q16527 193 aa4.71□□□□□ -1.66
CDH1-211ENST00000567320 ABHD17BQ5VST6 288 aa4.71□□□□□ -1.66
CDH1-211ENST00000567320 FBXO42Q6P3S6 717 aa4.71□□□□□ -1.66
CDH1-211ENST00000567320 BTNL9Q6UXG8 535 aa4.71□□□□□ -1.66
CDH1-211ENST00000567320 PRIMA1Q86XR5 153 aa4.71□□□□□ -1.66
CDH1-211ENST00000567320 FBXO18Q8NFZ0 1043 aa4.71□□□□□ -1.66
CDH1-211ENST00000567320 PAWRQ96IZ0 340 aaKnown RBP4.71□□□□□ -1.66
CDH1-211ENST00000567320 COQ10AQ96MF6 247 aa4.71□□□□□ -1.66
CDH1-211ENST00000567320 BBC3Q96PG8 261 aaPredicted RBP4.71□□□□□ -1.66
CDH1-211ENST00000567320 UHRF1Q96T88 793 aaPredicted RBP4.71□□□□□ -1.66
CDH1-211ENST00000567320 PLAAQ9Y263 795 aa4.71□□□□□ -1.66
CDH1-211ENST00000567320 NOX1Q9Y5S8 564 aa4.71□□□□□ -1.66
CDH1-211ENST00000567320 EPN1Q9Y6I3 576 aaPredicted RBP4.71□□□□□ -1.66
CDH1-211ENST00000567320 RPTORQ8N122 1335 aa4.71□□□□□ -1.66
CDH1-211ENST00000567320 DRGXA6NNA5 263 aa4.7□□□□□ -1.66
CDH1-211ENST00000567320 ADCY6O43306 1168 aa4.7□□□□□ -1.66
CDH1-211ENST00000567320 PHF2O75151 1096 aa4.7□□□□□ -1.66
CDH1-211ENST00000567320 CDKL5O76039 1030 aa4.7□□□□□ -1.66
CDH1-211ENST00000567320 SPDEFO95238 335 aa4.7□□□□□ -1.66
CDH1-211ENST00000567320 FOSP01100 380 aaPredicted RBP4.7□□□□□ -1.66
CDH1-211ENST00000567320 ZNF37AP17032 561 aaPredicted RBP4.7□□□□□ -1.66
CDH1-211ENST00000567320 FBLP22087 321 aaKnown RBP4.7□□□□□ -1.66
CDH1-211ENST00000567320 CRHR1P34998 444 aa4.7□□□□□ -1.66
CDH1-211ENST00000567320 CLK3P49761 638 aaKnown RBP4.7□□□□□ -1.66
CDH1-211ENST00000567320 PER3P56645 1201 aa4.7□□□□□ -1.66
CDH1-211ENST00000567320 MFSD14BQ5SR56 506 aa4.7□□□□□ -1.66
CDH1-211ENST00000567320 FAM102AQ5T9C2 384 aaPredicted RBP4.7□□□□□ -1.66
CDH1-211ENST00000567320 ZKSCAN2Q63HK3 967 aa4.7□□□□□ -1.66
CDH1-211ENST00000567320 TSHZ3Q63HK5 1081 aa4.7□□□□□ -1.66
CDH1-211ENST00000567320 MED25Q71SY5 747 aa4.7□□□□□ -1.66
CDH1-211ENST00000567320 REPS2Q8NFH8 660 aa4.7□□□□□ -1.66
CDH1-211ENST00000567320 SLC35B2Q8TB61 432 aa4.7□□□□□ -1.66
CDH1-211ENST00000567320 ASB10Q8WXI3 467 aa4.7□□□□□ -1.66
CDH1-211ENST00000567320 REXO4Q9GZR2 422 aaKnown RBP4.7□□□□□ -1.66
CDH1-211ENST00000567320 KIAA1586Q9HCI6 787 aa4.7□□□□□ -1.66
CDH1-211ENST00000567320 SYBUQ9NX95 663 aa4.7□□□□□ -1.66
CDH1-211ENST00000567320 DPP7Q9UHL4 492 aa4.7□□□□□ -1.66
CDH1-211ENST00000567320 MRPL42Q9Y6G3 142 aaKnown RBP4.7□□□□□ -1.66
CDH1-211ENST00000567320 MYCLP1P12525 358 aaPredicted RBP4.69□□□□□ -1.66
CDH1-211ENST00000567320 PTH2RP49190 550 aa4.69□□□□□ -1.66
CDH1-211ENST00000567320 FLT3LGP49771 235 aa4.69□□□□□ -1.66
CDH1-211ENST00000567320 CLRN1P58418 232 aa4.69□□□□□ -1.66
CDH1-211ENST00000567320 BLOC1S1P78537 153 aa4.69□□□□□ -1.66
CDH1-211ENST00000567320 FOXI1Q12951 378 aa4.69□□□□□ -1.66
CDH1-211ENST00000567320 MPP3Q13368 585 aa4.69□□□□□ -1.66
CDH1-211ENST00000567320 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.69□□□□□ -1.66
CDH1-211ENST00000567320 DALRD3Q5D0E6 543 aaKnown RBP4.69□□□□□ -1.66
CDH1-211ENST00000567320 FAM180AQ6UWF9 173 aa4.69□□□□□ -1.66
CDH1-211ENST00000567320 SLC41A1Q8IVJ1 513 aa4.69□□□□□ -1.66
CDH1-211ENST00000567320 OR56A1Q8NGH5 318 aa4.69□□□□□ -1.66
CDH1-211ENST00000567320 LINC00476Q8WZB0 136 aa4.69□□□□□ -1.66
CDH1-211ENST00000567320 NELL1Q92832 810 aa4.69□□□□□ -1.66
CDH1-211ENST00000567320 RNF31Q96EP0 1072 aa4.69□□□□□ -1.66
CDH1-211ENST00000567320 ADAM2Q99965 735 aa4.69□□□□□ -1.66
CDH1-211ENST00000567320 R3HDMLQ9H3Y0 253 aa4.69□□□□□ -1.66
CDH1-211ENST00000567320 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.68□□□□□ -1.66
CDH1-211ENST00000567320 CXorf49A8MYA2 514 aaPredicted RBP4.68□□□□□ -1.66
CDH1-211ENST00000567320 PDE8AO60658 829 aa4.68□□□□□ -1.66
CDH1-211ENST00000567320 ESRRBO95718 433 aa4.68□□□□□ -1.66
CDH1-211ENST00000567320 SNRPA1P09661 255 aaKnown RBP4.68□□□□□ -1.66
CDH1-211ENST00000567320 RAP2AP10114 183 aa4.68□□□□□ -1.66
CDH1-211ENST00000567320 PDCD1Q15116 288 aa4.68□□□□□ -1.66
CDH1-211ENST00000567320 FAM47AQ5JRC9 791 aa4.68□□□□□ -1.66
CDH1-211ENST00000567320 RRP12Q5JTH9 1297 aaKnown RBP4.68□□□□□ -1.66
CDH1-211ENST00000567320 SP5Q6BEB4 398 aaPredicted RBP4.68□□□□□ -1.66
CDH1-211ENST00000567320 ARMC6Q6NXE6 501 aa4.68□□□□□ -1.66
CDH1-211ENST00000567320 MAPKAPK5Q8IW41 473 aa4.68□□□□□ -1.66
CDH1-211ENST00000567320 CAGE1Q8TC20 777 aa4.68□□□□□ -1.66
CDH1-211ENST00000567320 NTN5Q8WTR8 489 aaPredicted RBP4.68□□□□□ -1.66
CDH1-211ENST00000567320 RIN2Q8WYP3 895 aaPredicted RBP4.68□□□□□ -1.66
CDH1-211ENST00000567320 RAX2Q96IS3 184 aa4.68□□□□□ -1.66
CDH1-211ENST00000567320 SPATA5L1Q9BVQ7 753 aa4.68□□□□□ -1.66
CDH1-211ENST00000567320 ALOXE3Q9BYJ1 711 aa4.68□□□□□ -1.66
CDH1-211ENST00000567320 TOPORSQ9NS56 1045 aaPredicted RBP4.68□□□□□ -1.66
CDH1-211ENST00000567320 DKK2Q9UBU2 259 aa4.68□□□□□ -1.66
CDH1-211ENST00000567320 TLK1Q9UKI8 766 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms