RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 TOMM70O94826 608 aa25.1■■□□□ 1.61
LINC00543-201ENST00000567234 CLDN10P78369 228 aa25.1■■□□□ 1.61
LINC00543-201ENST00000567234 TTLL4Q14679 1199 aa25.1■■□□□ 1.61
LINC00543-201ENST00000567234 IER5Q5VY09 327 aa25.1■■□□□ 1.61
LINC00543-201ENST00000567234 ABRAQ8N0Z2 381 aa25.1■■□□□ 1.61
LINC00543-201ENST00000567234 FBXL13Q8NEE6 735 aa25.1■■□□□ 1.61
LINC00543-201ENST00000567234 ATP8B4Q8TF62 1192 aa25.1■■□□□ 1.61
LINC00543-201ENST00000567234 TCP11Q8WWU5 503 aa25.1■■□□□ 1.61
LINC00543-201ENST00000567234 GLG1Q92896 1179 aa25.1■■□□□ 1.61
LINC00543-201ENST00000567234 ABCB6Q9NP58 842 aa25.1■■□□□ 1.61
LINC00543-201ENST00000567234 FAN1Q9Y2M0 1017 aa25.1■■□□□ 1.61
LINC00543-201ENST00000567234 TLL2Q9Y6L7 1015 aa25.1■■□□□ 1.61
LINC00543-201ENST00000567234 LDHAP00338 332 aaKnown RBP25.09■■□□□ 1.61
LINC00543-201ENST00000567234 GCLCP48506 637 aaPredicted RBP25.09■■□□□ 1.61
LINC00543-201ENST00000567234 MFAP3P55082 362 aa25.09■■□□□ 1.61
LINC00543-201ENST00000567234 MAP2K1Q02750 393 aaPredicted RBP25.09■■□□□ 1.61
LINC00543-201ENST00000567234 HSDL1Q3SXM5 330 aa25.09■■□□□ 1.61
LINC00543-201ENST00000567234 ANKRD23Q86SG2 305 aa25.09■■□□□ 1.61
LINC00543-201ENST00000567234 CAGE1Q8TC20 777 aa25.09■■□□□ 1.61
LINC00543-201ENST00000567234 U2AF1L4Q8WU68 220 aaKnown RBP25.09■■□□□ 1.61
LINC00543-201ENST00000567234 SCFD2Q8WU76 684 aa25.09■■□□□ 1.61
LINC00543-201ENST00000567234 PSPC1Q8WXF1 523 aaKnown RBP25.09■■□□□ 1.61
LINC00543-201ENST00000567234 CAPZA3Q96KX2 299 aa25.09■■□□□ 1.61
LINC00543-201ENST00000567234 FAM81BQ96LP2 452 aa25.09■■□□□ 1.61
LINC00543-201ENST00000567234 JPH2Q9BR39 696 aaPredicted RBP25.09■■□□□ 1.61
LINC00543-201ENST00000567234 DIS3Q9Y2L1 958 aaKnown RBP25.09■■□□□ 1.61
LINC00543-201ENST00000567234 TARSL2A2RTX5 802 aaKnown RBP25.09■■□□□ 1.61
LINC00543-201ENST00000567234 ADCY3O60266 1144 aa25.09■■□□□ 1.61
LINC00543-201ENST00000567234 TNFAIP3P21580 790 aa25.09■■□□□ 1.61
LINC00543-201ENST00000567234 USP8P40818 1118 aa25.09■■□□□ 1.61
LINC00543-201ENST00000567234 EFNA5P52803 228 aa25.09■■□□□ 1.61
LINC00543-201ENST00000567234 PSMD6Q15008 389 aa25.09■■□□□ 1.61
LINC00543-201ENST00000567234 MEI1Q5TIA1 1274 aa25.09■■□□□ 1.61
LINC00543-201ENST00000567234 MMS22LQ6ZRQ5 1243 aa25.09■■□□□ 1.61
LINC00543-201ENST00000567234 FBXO16Q8IX29 292 aaPredicted RBP25.09■■□□□ 1.61
LINC00543-201ENST00000567234 NOA1Q8NC60 698 aaKnown RBP25.09■■□□□ 1.61
LINC00543-201ENST00000567234 RUBCNQ92622 972 aa25.09■■□□□ 1.61
LINC00543-201ENST00000567234 SPATA33Q96N06 139 aa25.09■■□□□ 1.61
LINC00543-201ENST00000567234 FAM213AQ9BRX8 229 aa25.09■■□□□ 1.61
LINC00543-201ENST00000567234 MORF4L1Q9UBU8 362 aa25.09■■□□□ 1.61
LINC00543-201ENST00000567234 ABT1Q9ULW3 272 aaKnown RBP25.09■■□□□ 1.61
LINC00543-201ENST00000567234 ZNF185O15231 689 aa25.08■■□□□ 1.61
LINC00543-201ENST00000567234 STRNO43815 780 aa25.08■■□□□ 1.61
LINC00543-201ENST00000567234 ZC3H11AO75152 810 aaKnown RBP eCLIP25.08■■□□□ 1.61
LINC00543-201ENST00000567234 LRRC31Q6UY01 552 aa25.08■■□□□ 1.61
LINC00543-201ENST00000567234 GLYCTKQ8IVS8 523 aa25.08■■□□□ 1.61
LINC00543-201ENST00000567234 LMBR1Q8WVP7 490 aa25.08■■□□□ 1.61
LINC00543-201ENST00000567234 SMARCAD1Q9H4L7 1026 aa25.08■■□□□ 1.61
LINC00543-201ENST00000567234 RAB20Q9NX57 234 aa25.08■■□□□ 1.61
LINC00543-201ENST00000567234 AGO2Q9UKV8 859 aaKnown RBP25.08■■□□□ 1.61
LINC00543-201ENST00000567234 IGKV6-21A0A0C4DH24 114 aa25.07■■□□□ 1.6
LINC00543-201ENST00000567234 GRID2IPA4D2P6 1211 aa25.07■■□□□ 1.6
LINC00543-201ENST00000567234 TXNP10599 105 aaKnown RBP25.07■■□□□ 1.6
LINC00543-201ENST00000567234 CAPSQ13938 189 aa25.07■■□□□ 1.6
LINC00543-201ENST00000567234 MXD4Q14582 209 aaPredicted RBP25.07■■□□□ 1.6
LINC00543-201ENST00000567234 ZNF792Q3KQV3 632 aa25.07■■□□□ 1.6
LINC00543-201ENST00000567234 SV2AQ7L0J3 742 aa25.07■■□□□ 1.6
LINC00543-201ENST00000567234 FAM71AQ8IYT1 594 aa25.07■■□□□ 1.6
LINC00543-201ENST00000567234 ZNF784Q8NCA9 323 aaPredicted RBP25.07■■□□□ 1.6
LINC00543-201ENST00000567234 SEMA4DQ92854 862 aa25.07■■□□□ 1.6
LINC00543-201ENST00000567234 NT5C1BQ96P26 610 aa25.07■■□□□ 1.6
LINC00543-201ENST00000567234 PNKPQ96T60 521 aa25.07■■□□□ 1.6
LINC00543-201ENST00000567234 AGPAT1Q99943 283 aa25.07■■□□□ 1.6
LINC00543-201ENST00000567234 PDE2AO00408 941 aaPredicted RBP25.07■■□□□ 1.6
LINC00543-201ENST00000567234 LRRN2O75325 713 aa25.07■■□□□ 1.6
LINC00543-201ENST00000567234 TMEM253P0C7T8 217 aa25.07■■□□□ 1.6
LINC00543-201ENST00000567234 YY1P25490 414 aa25.07■■□□□ 1.6
LINC00543-201ENST00000567234 NFRKBQ6P4R8 1299 aa25.07■■□□□ 1.6
LINC00543-201ENST00000567234 ZPBP2Q6X784 338 aa25.07■■□□□ 1.6
LINC00543-201ENST00000567234 C15orf39Q6ZRI6 1047 aa25.07■■□□□ 1.6
LINC00543-201ENST00000567234 ARMCX2Q7L311 632 aa25.07■■□□□ 1.6
LINC00543-201ENST00000567234 ZNF467Q7Z7K2 595 aaPredicted RBP25.07■■□□□ 1.6
LINC00543-201ENST00000567234 SHC3Q92529 594 aa25.07■■□□□ 1.6
LINC00543-201ENST00000567234 TACO1Q9BSH4 297 aaKnown RBP25.07■■□□□ 1.6
LINC00543-201ENST00000567234 ATXN2Q99700 1313 aaKnown RBP25.06■■□□□ 1.6
LINC00543-201ENST00000567234 SHOX2O60902 331 aaPredicted RBP25.06■■□□□ 1.6
LINC00543-201ENST00000567234 SLC10A3P09131 477 aa25.06■■□□□ 1.6
LINC00543-201ENST00000567234 GALCP54803 685 aa25.06■■□□□ 1.6
LINC00543-201ENST00000567234 PLCB4Q15147 1175 aa25.06■■□□□ 1.6
LINC00543-201ENST00000567234 ENOSF1Q7L5Y1 443 aa25.06■■□□□ 1.6
LINC00543-201ENST00000567234 COG1Q8WTW3 980 aa25.06■■□□□ 1.6
LINC00543-201ENST00000567234 POP1Q99575 1024 aaKnown RBP25.06■■□□□ 1.6
LINC00543-201ENST00000567234 VTA1Q9NP79 307 aa25.06■■□□□ 1.6
LINC00543-201ENST00000567234 NCANO14594 1321 aa25.06■■□□□ 1.6
LINC00543-201ENST00000567234 A0A0B4J269 797 aa25.05■■□□□ 1.6
LINC00543-201ENST00000567234 TMEM88BA6NKF7 163 aa25.05■■□□□ 1.6
LINC00543-201ENST00000567234 FAM155AB1AL88 458 aaPredicted RBP25.05■■□□□ 1.6
LINC00543-201ENST00000567234 IGF2BP3O00425 579 aaKnown RBP eCLIP25.05■■□□□ 1.6
LINC00543-201ENST00000567234 CES2O00748 559 aa25.05■■□□□ 1.6
LINC00543-201ENST00000567234 PAFAH1B1P43034 410 aa25.05■■□□□ 1.6
LINC00543-201ENST00000567234 GYS2P54840 703 aa25.05■■□□□ 1.6
LINC00543-201ENST00000567234 CDCA2Q69YH5 1023 aaPredicted RBP25.05■■□□□ 1.6
LINC00543-201ENST00000567234 TADA2BQ86TJ2 420 aa25.05■■□□□ 1.6
LINC00543-201ENST00000567234 PACS2Q86VP3 889 aa25.05■■□□□ 1.6
LINC00543-201ENST00000567234 LRRC57Q8N9N7 239 aa25.05■■□□□ 1.6
LINC00543-201ENST00000567234 HELQQ8TDG4 1101 aa25.05■■□□□ 1.6
LINC00543-201ENST00000567234 PRPF31Q8WWY3 499 aaKnown RBP25.05■■□□□ 1.6
LINC00543-201ENST00000567234 CALR3Q96L12 384 aaKnown RBP25.05■■□□□ 1.6
LINC00543-201ENST00000567234 KREMEN1Q96MU8 473 aa25.05■■□□□ 1.6
LINC00543-201ENST00000567234 ZBTB42B2RXF5 422 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms