RNA–Protein interactions for RNA: ENST00000567143.1

GINS3-206, Transcript of GINS complex subunit 3, humanhuman

Gene GINS3, Length 3,202 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-206ENST00000567143 CYP3A4P08684 503 aa6.94□□□□□ -1.3
GINS3-206ENST00000567143 HARSP12081 509 aaKnown RBP6.94□□□□□ -1.3
GINS3-206ENST00000567143 CHKAP35790 457 aa6.94□□□□□ -1.3
GINS3-206ENST00000567143 PEX3P56589 373 aa6.94□□□□□ -1.3
GINS3-206ENST00000567143 CALCOCO2Q13137 446 aa6.94□□□□□ -1.3
GINS3-206ENST00000567143 RRP1BQ14684 758 aaKnown RBP6.94□□□□□ -1.3
GINS3-206ENST00000567143 SEL1L2Q5TEA6 688 aa6.94□□□□□ -1.3
GINS3-206ENST00000567143 PLA2G4FQ68DD2 849 aa6.94□□□□□ -1.3
GINS3-206ENST00000567143 C6orf89Q6UWU4 347 aa6.94□□□□□ -1.3
GINS3-206ENST00000567143 HOOK3Q86VS8 718 aa6.94□□□□□ -1.3
GINS3-206ENST00000567143 SIAH1Q8IUQ4 282 aa6.94□□□□□ -1.3
GINS3-206ENST00000567143 SGSM3Q96HU1 749 aa6.94□□□□□ -1.3
GINS3-206ENST00000567143 PCDHB18PQ96TA0 734 aa6.94□□□□□ -1.3
GINS3-206ENST00000567143 AGPAT1Q99943 283 aa6.94□□□□□ -1.3
GINS3-206ENST00000567143 NUP85Q9BW27 656 aa6.94□□□□□ -1.3
GINS3-206ENST00000567143 STK33Q9BYT3 514 aa6.94□□□□□ -1.3
GINS3-206ENST00000567143 PABPC3Q9H361 631 aaKnown RBP6.94□□□□□ -1.3
GINS3-206ENST00000567143 SLITRK6Q9H5Y7 841 aa6.94□□□□□ -1.3
GINS3-206ENST00000567143 RPTORQ8N122 1335 aa6.94□□□□□ -1.3
GINS3-206ENST00000567143 TMEM120BA0PK00 339 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 WDR91A4D1P6 747 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 PI4K2BG5E9Z4 385 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 RASSF9O75901 435 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 RARAP10276 462 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 BMP3P12645 472 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 EZRP15311 586 aaKnown RBP6.93□□□□□ -1.3
GINS3-206ENST00000567143 JAM2P57087 298 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 PTENP60484 403 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 TRIM68Q6AZZ1 485 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 ZDHHC24Q6UX98 284 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 LRIG3Q6UXM1 1119 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 PPP4R3CPQ6ZMV5 832 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 SH3BP5LQ7L8J4 393 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 CBWD2Q8IUF1 395 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 CPA5Q8WXQ8 436 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 SPOCK2Q92563 424 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 ARHGEF2Q92974 986 aaKnown RBP6.93□□□□□ -1.3
GINS3-206ENST00000567143 GLIS2Q9BZE0 524 aaPredicted RBP6.93□□□□□ -1.3
GINS3-206ENST00000567143 EPB41L4BQ9H329 900 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 CHST7Q9NS84 486 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 ZNF70Q9UC06 446 aaPredicted RBP6.93□□□□□ -1.3
GINS3-206ENST00000567143 MTRF1LQ9UGC7 380 aaKnown RBP6.93□□□□□ -1.3
GINS3-206ENST00000567143 TCEAL9Q9UHQ7 104 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 PRR12Q9ULL5 1215 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 A0A0G2JMZ2 1700 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 MYH7BA7E2Y1 1941 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 CCT8L1PA6NM43 557 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 H0Y3Z8 333 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 GOLGA8SH3BPF8 625 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 GOLGA8MH3BSY2 632 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 EYA4O95677 639 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 MYCLP12524 364 aaPredicted RBP6.93□□□□□ -1.3
GINS3-206ENST00000567143 PAX7P23759 505 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 ADCY8P40145 1251 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 PPATQ06203 517 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 BFSP1Q12934 665 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 SEMA3FQ13275 785 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 TNFAIP1Q13829 316 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 SGO2Q562F6 1265 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 FAM102BQ5T8I3 360 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 CST9Q5W186 159 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 DUPD1Q68J44 220 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 NOP9Q86U38 636 aaKnown RBP6.93□□□□□ -1.3
GINS3-206ENST00000567143 UBL4BQ8N7F7 174 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 FAM151AQ8WW52 585 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 CALR3Q96L12 384 aaKnown RBP6.93□□□□□ -1.3
GINS3-206ENST00000567143 FAM129AQ9BZQ8 928 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 GPR88Q9GZN0 384 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 C10orf88Q9H8K7 445 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 NOD2Q9HC29 1040 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 ALG13Q9NP73 1137 aaKnown RBP6.93□□□□□ -1.3
GINS3-206ENST00000567143 RASAL2Q9UJF2 1139 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 VAV3Q9UKW4 847 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 TRPC6Q9Y210 931 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 STXBP5LQ9Y2K9 1186 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.93□□□□□ -1.3
GINS3-206ENST00000567143 ZMYM2Q9UBW7 1377 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 ATAD5Q96QE3 1844 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 A6NNZ2 444 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 POC1B-GALNT4F8VUJ3 575 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 hCG_1984214I3L0E3 225 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 MARSP56192 900 aaKnown RBP6.93□□□□□ -1.3
GINS3-206ENST00000567143 KRT17Q04695 432 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 TUBB8Q3ZCM7 444 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 ERMARDQ5T6L9 678 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 ZNF449Q6P9G9 518 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 EPM2AIP1Q7L775 607 aaPredicted RBP6.93□□□□□ -1.3
GINS3-206ENST00000567143 GSTA5Q7RTV2 222 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 ZNF720Q7Z2F6 126 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 OGFOD1Q8N543 542 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 ZNF713Q8N859 430 aaPredicted RBP6.93□□□□□ -1.3
GINS3-206ENST00000567143 ZNF564Q8TBZ8 553 aaPredicted RBP6.93□□□□□ -1.3
GINS3-206ENST00000567143 CCT6BQ92526 530 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 CDC42EP4Q9H3Q1 356 aaKnown RBP6.93□□□□□ -1.3
GINS3-206ENST00000567143 UNC45AQ9H3U1 944 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 ZDHHC18Q9NUE0 388 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 GRHL1Q9NZI5 618 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 ANAPC7Q9UJX3 599 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 SYNPO2Q9UMS6 1093 aa6.93□□□□□ -1.3
GINS3-206ENST00000567143 PFASO15067 1338 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms