RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 RPN1P04843 607 aaKnown RBP28.56■■■□□ 2.16
NME3-209ENST00000566600 HARSP12081 509 aaKnown RBP28.56■■■□□ 2.16
NME3-209ENST00000566600 DPYDQ12882 1025 aa28.56■■■□□ 2.16
NME3-209ENST00000566600 POSTNQ15063 836 aa28.56■■■□□ 2.16
NME3-209ENST00000566600 THNSL1Q8IYQ7 743 aa28.56■■■□□ 2.16
NME3-209ENST00000566600 ZFP42Q96MM3 310 aa28.56■■■□□ 2.16
NME3-209ENST00000566600 ACAP3Q96P50 834 aa28.56■■■□□ 2.16
NME3-209ENST00000566600 FGFBP2Q9BYJ0 223 aa28.56■■■□□ 2.16
NME3-209ENST00000566600 KLK14Q9P0G3 267 aa28.56■■■□□ 2.16
NME3-209ENST00000566600 STYXL1Q9Y6J8 313 aa28.56■■■□□ 2.16
NME3-209ENST00000566600 KIAA1671Q9BY89 1806 aa28.55■■■□□ 2.16
NME3-209ENST00000566600 A0A0B4J269 797 aa28.55■■■□□ 2.16
NME3-209ENST00000566600 EPOPA6NHQ4 379 aa28.55■■■□□ 2.16
NME3-209ENST00000566600 PRPF40AO75400 957 aaKnown RBP28.55■■■□□ 2.16
NME3-209ENST00000566600 NR1I2O75469 434 aa28.55■■■□□ 2.16
NME3-209ENST00000566600 PRPF6O94906 941 aaKnown RBP28.55■■■□□ 2.16
NME3-209ENST00000566600 PPM1AP35813 382 aa28.55■■■□□ 2.16
NME3-209ENST00000566600 ALDH7A1P49419 539 aaKnown RBP28.55■■■□□ 2.16
NME3-209ENST00000566600 SCNN1GP51170 649 aa28.55■■■□□ 2.16
NME3-209ENST00000566600 GPM6BQ13491 265 aa28.55■■■□□ 2.16
NME3-209ENST00000566600 KMT5BQ4FZB7 885 aa28.55■■■□□ 2.16
NME3-209ENST00000566600 SLC39A4Q6P5W5 647 aa28.55■■■□□ 2.16
NME3-209ENST00000566600 KCNT2Q6UVM3 1135 aa28.55■■■□□ 2.16
NME3-209ENST00000566600 EPM2AIP1Q7L775 607 aaPredicted RBP28.55■■■□□ 2.16
NME3-209ENST00000566600 ELOA2Q8IYF1 753 aaPredicted RBP28.55■■■□□ 2.16
NME3-209ENST00000566600 ZNF507Q8TCN5 953 aa28.55■■■□□ 2.16
NME3-209ENST00000566600 MSTO1Q9BUK6 570 aa28.55■■■□□ 2.16
NME3-209ENST00000566600 HCSTQ9UBK5 93 aa28.55■■■□□ 2.16
NME3-209ENST00000566600 MYO9BQ13459 2157 aa28.54■■■□□ 2.16
NME3-209ENST00000566600 OGTO15294 1046 aa28.54■■■□□ 2.16
NME3-209ENST00000566600 PRR29P0C7W0 189 aa28.54■■■□□ 2.16
NME3-209ENST00000566600 AFF1P51825 1210 aaKnown RBP28.54■■■□□ 2.16
NME3-209ENST00000566600 OSTNP61366 133 aa28.54■■■□□ 2.16
NME3-209ENST00000566600 KCNA1Q09470 495 aa28.54■■■□□ 2.16
NME3-209ENST00000566600 GRIK3Q13003 919 aa28.54■■■□□ 2.16
NME3-209ENST00000566600 CEP120Q8N960 986 aa28.54■■■□□ 2.16
NME3-209ENST00000566600 MYLIPQ8WY64 445 aa28.54■■■□□ 2.16
NME3-209ENST00000566600 TMEM175Q9BSA9 504 aa28.54■■■□□ 2.16
NME3-209ENST00000566600 NRDE2Q9H7Z3 1164 aa28.54■■■□□ 2.16
NME3-209ENST00000566600 SLC39A2Q9NP94 309 aa28.54■■■□□ 2.16
NME3-209ENST00000566600 ANKRD63C9JTQ0 380 aa28.53■■■□□ 2.16
NME3-209ENST00000566600 RFXAPO00287 272 aa28.53■■■□□ 2.16
NME3-209ENST00000566600 ZC3H11AO75152 810 aaKnown RBP eCLIP28.53■■■□□ 2.165e-7■□□□□ 8.5
NME3-209ENST00000566600 CLTAP09496 248 aa28.53■■■□□ 2.16
NME3-209ENST00000566600 BCAR1P56945 870 aa28.53■■■□□ 2.16
NME3-209ENST00000566600 KLHL23Q8NBE8 558 aa28.53■■■□□ 2.16
NME3-209ENST00000566600 GSTCDQ8NEC7 633 aa28.53■■■□□ 2.16
NME3-209ENST00000566600 GDPD5Q8WTR4 605 aa28.53■■■□□ 2.16
NME3-209ENST00000566600 HAPLN2Q9GZV7 340 aa28.53■■■□□ 2.16
NME3-209ENST00000566600 GBP3Q9H0R5 595 aa28.53■■■□□ 2.16
NME3-209ENST00000566600 LMCD1Q9NZU5 365 aa28.53■■■□□ 2.16
NME3-209ENST00000566600 TRANK1O15050 2925 aa28.53■■■□□ 2.16
NME3-209ENST00000566600 FOSL2P15408 326 aa28.52■■■□□ 2.16
NME3-209ENST00000566600 POU3F3P20264 500 aaPredicted RBP28.52■■■□□ 2.16
NME3-209ENST00000566600 KCNB1Q14721 858 aa28.52■■■□□ 2.16
NME3-209ENST00000566600 ZNF280BQ86YH2 543 aa28.52■■■□□ 2.16
NME3-209ENST00000566600 GLIS3Q8NEA6 775 aa28.52■■■□□ 2.16
NME3-209ENST00000566600 POMGNT1Q8WZA1 660 aa28.52■■■□□ 2.16
NME3-209ENST00000566600 LMAN2LQ9H0V9 348 aa28.52■■■□□ 2.16
NME3-209ENST00000566600 MIOSQ9NXC5 875 aa28.52■■■□□ 2.16
NME3-209ENST00000566600 SPG21Q9NZD8 308 aa28.52■■■□□ 2.16
NME3-209ENST00000566600 LPXNO60711 386 aa28.51■■■□□ 2.15
NME3-209ENST00000566600 RHOBTB3O94955 611 aa28.51■■■□□ 2.15
NME3-209ENST00000566600 SMC2O95347 1197 aa28.51■■■□□ 2.15
NME3-209ENST00000566600 THP07101 528 aa28.51■■■□□ 2.15
NME3-209ENST00000566600 PTPROQ16827 1216 aa28.51■■■□□ 2.15
NME3-209ENST00000566600 BMT2Q1RMZ1 405 aa28.51■■■□□ 2.15
NME3-209ENST00000566600 RMND1Q9NWS8 449 aa28.51■■■□□ 2.15
NME3-209ENST00000566600 AGO2Q9UKV8 859 aaKnown RBP28.51■■■□□ 2.15
NME3-209ENST00000566600 PLAGL2Q9UPG8 496 aa28.51■■■□□ 2.15
NME3-209ENST00000566600 TDRD15B5MCY1 1934 aaKnown RBP28.5■■■□□ 2.15
NME3-209ENST00000566600 DDHD2O94830 711 aa28.5■■■□□ 2.15
NME3-209ENST00000566600 ALDH2P05091 517 aa28.5■■■□□ 2.15
NME3-209ENST00000566600 GARTP22102 1010 aa28.5■■■□□ 2.15
NME3-209ENST00000566600 IGFBP4P22692 258 aa28.5■■■□□ 2.15
NME3-209ENST00000566600 SNRPFP62306 86 aaKnown RBP28.5■■■□□ 2.15
NME3-209ENST00000566600 KRT17Q04695 432 aa28.5■■■□□ 2.15
NME3-209ENST00000566600 UBE3AQ05086 875 aa28.5■■■□□ 2.15
NME3-209ENST00000566600 DSC1Q08554 894 aa28.5■■■□□ 2.15
NME3-209ENST00000566600 PNOCQ13519 176 aa28.5■■■□□ 2.15
NME3-209ENST00000566600 XKR4Q5GH76 650 aa28.5■■■□□ 2.15
NME3-209ENST00000566600 ALKAL1Q6UXT8 129 aa28.5■■■□□ 2.15
NME3-209ENST00000566600 SCFD1Q8WVM8 642 aa28.5■■■□□ 2.15
NME3-209ENST00000566600 SNX27Q96L92 541 aa28.5■■■□□ 2.15
NME3-209ENST00000566600 PLEKHA5Q9HAU0 1116 aa28.5■■■□□ 2.15
NME3-209ENST00000566600 COL4A4P53420 1690 aaPredicted RBP28.5■■■□□ 2.15
NME3-209ENST00000566600 TISP43B9A030 160 aa28.49■■■□□ 2.15
NME3-209ENST00000566600 GOLGA6L22H0YM25 854 aa28.49■■■□□ 2.15
NME3-209ENST00000566600 PTGESO14684 152 aa28.49■■■□□ 2.15
NME3-209ENST00000566600 KIAA0391O15091 583 aaKnown RBP28.49■■■□□ 2.15
NME3-209ENST00000566600 FGF18O76093 207 aa28.49■■■□□ 2.15
NME3-209ENST00000566600 KIF20AO95235 890 aa28.49■■■□□ 2.15
NME3-209ENST00000566600 ITGB1P05556 798 aa28.49■■■□□ 2.15
NME3-209ENST00000566600 GALTP07902 379 aa28.49■■■□□ 2.15
NME3-209ENST00000566600 POU5F1Q01860 360 aaKnown RBP28.49■■■□□ 2.15
NME3-209ENST00000566600 PLCB3Q01970 1234 aa28.49■■■□□ 2.15
NME3-209ENST00000566600 STK4Q13043 487 aa28.49■■■□□ 2.15
NME3-209ENST00000566600 ADGRE1Q14246 886 aa28.49■■■□□ 2.15
NME3-209ENST00000566600 COLGALT2Q8IYK4 626 aa28.49■■■□□ 2.15
NME3-209ENST00000566600 SLC39A11Q8N1S5 342 aa28.49■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms