RNA–Protein interactions for RNA: ENST00000566557.5

SCAMP2-208, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-208ENST00000566557 SNTG2Q9NY99 539 aa17.89■□□□□ 0.45
SCAMP2-208ENST00000566557 GDAQ9Y2T3 454 aa17.89■□□□□ 0.45
SCAMP2-208ENST00000566557 COL4A4P53420 1690 aaPredicted RBP17.88■□□□□ 0.45
SCAMP2-208ENST00000566557 RFXAPO00287 272 aa17.88■□□□□ 0.45
SCAMP2-208ENST00000566557 CLDN3O15551 220 aa17.88■□□□□ 0.45
SCAMP2-208ENST00000566557 PPP1R37O75864 691 aa17.88■□□□□ 0.45
SCAMP2-208ENST00000566557 MCF2P10911 925 aa17.88■□□□□ 0.45
SCAMP2-208ENST00000566557 TAP1Q03518 808 aa17.88■□□□□ 0.45
SCAMP2-208ENST00000566557 RNASELQ05823 741 aaKnown RBP17.88■□□□□ 0.45
SCAMP2-208ENST00000566557 KCNA1Q09470 495 aa17.88■□□□□ 0.45
SCAMP2-208ENST00000566557 MRPL10Q7Z7H8 261 aaKnown RBP17.88■□□□□ 0.45
SCAMP2-208ENST00000566557 NELFCDQ8IXH7 590 aa17.88■□□□□ 0.45
SCAMP2-208ENST00000566557 LRRC43Q8N309 656 aa17.88■□□□□ 0.45
SCAMP2-208ENST00000566557 CEP120Q8N960 986 aa17.88■□□□□ 0.45
SCAMP2-208ENST00000566557 TIGD1Q96MW7 591 aa17.88■□□□□ 0.45
SCAMP2-208ENST00000566557 CASD1Q96PB1 797 aa17.88■□□□□ 0.45
SCAMP2-208ENST00000566557 RPS6KC1Q96S38 1066 aa17.88■□□□□ 0.45
SCAMP2-208ENST00000566557 CCDC94Q9BW85 323 aaPredicted RBP17.88■□□□□ 0.45
SCAMP2-208ENST00000566557 MRPL9Q9BYD2 267 aaKnown RBP17.88■□□□□ 0.45
SCAMP2-208ENST00000566557 IKZF4Q9H2S9 585 aa17.88■□□□□ 0.45
SCAMP2-208ENST00000566557 UBN1Q9NPG3 1134 aa17.88■□□□□ 0.45
SCAMP2-208ENST00000566557 KLK14Q9P0G3 267 aa17.88■□□□□ 0.45
SCAMP2-208ENST00000566557 HCSTQ9UBK5 93 aa17.88■□□□□ 0.45
SCAMP2-208ENST00000566557 MRPL42Q9Y6G3 142 aaKnown RBP17.88■□□□□ 0.45
SCAMP2-208ENST00000566557 RALGAPA2Q2PPJ7 1873 aa17.88■□□□□ 0.45
SCAMP2-208ENST00000566557 TISP43B9A030 160 aa17.87■□□□□ 0.45
SCAMP2-208ENST00000566557 GPR37L1O60883 481 aa17.87■□□□□ 0.45
SCAMP2-208ENST00000566557 RECQL4O94761 1208 aa17.87■□□□□ 0.45
SCAMP2-208ENST00000566557 SMC2O95347 1197 aa17.87■□□□□ 0.45
SCAMP2-208ENST00000566557 PIGRP01833 764 aa17.87■□□□□ 0.45
SCAMP2-208ENST00000566557 CTNNB1P35222 781 aa17.87■□□□□ 0.45
SCAMP2-208ENST00000566557 NOMO2Q5JPE7 1267 aa17.87■□□□□ 0.45
SCAMP2-208ENST00000566557 SPRED2Q7Z698 418 aa17.87■□□□□ 0.45
SCAMP2-208ENST00000566557 NOC3LQ8WTT2 800 aaKnown RBP17.87■□□□□ 0.45
SCAMP2-208ENST00000566557 ARNTL2Q8WYA1 636 aa17.87■□□□□ 0.45
SCAMP2-208ENST00000566557 ERCC4Q92889 916 aaPredicted RBP17.87■□□□□ 0.45
SCAMP2-208ENST00000566557 KCNN1Q92952 543 aa17.87■□□□□ 0.45
SCAMP2-208ENST00000566557 TGS1Q96RS0 853 aaKnown RBP17.87■□□□□ 0.45
SCAMP2-208ENST00000566557 GAD1Q99259 594 aa17.87■□□□□ 0.45
SCAMP2-208ENST00000566557 C17orf80Q9BSJ5 609 aa17.87■□□□□ 0.45
SCAMP2-208ENST00000566557 GBP3Q9H0R5 595 aa17.87■□□□□ 0.45
SCAMP2-208ENST00000566557 COG5Q9UP83 839 aa17.87■□□□□ 0.45
SCAMP2-208ENST00000566557 MTCH2Q9Y6C9 303 aa17.87■□□□□ 0.45
SCAMP2-208ENST00000566557 MUC6Q6W4X9 2439 aa17.86■□□□□ 0.45
SCAMP2-208ENST00000566557 FAM86C2PA6NEL3 165 aa17.86■□□□□ 0.45
SCAMP2-208ENST00000566557 ANKRD63C9JTQ0 380 aa17.86■□□□□ 0.45
SCAMP2-208ENST00000566557 TULP1O00294 542 aaPredicted RBP17.86■□□□□ 0.45
SCAMP2-208ENST00000566557 EIF3DO15371 548 aaKnown RBP eCLIP17.86■□□□□ 0.45
SCAMP2-208ENST00000566557 OFD1O75665 1012 aa17.86■□□□□ 0.45
SCAMP2-208ENST00000566557 POMCP01189 267 aa17.86■□□□□ 0.45
SCAMP2-208ENST00000566557 PROZP22891 400 aa17.86■□□□□ 0.45
SCAMP2-208ENST00000566557 GRM5P41594 1212 aa17.86■□□□□ 0.45
SCAMP2-208ENST00000566557 SCNN1GP51170 649 aa17.86■□□□□ 0.45
SCAMP2-208ENST00000566557 YARSP54577 528 aaKnown RBP17.86■□□□□ 0.45
SCAMP2-208ENST00000566557 MCL1Q07820 350 aa17.86■□□□□ 0.45
SCAMP2-208ENST00000566557 EHHADHQ08426 723 aa17.86■□□□□ 0.45
SCAMP2-208ENST00000566557 SEZ6Q53EL9 994 aa17.86■□□□□ 0.45
SCAMP2-208ENST00000566557 SLC39A4Q6P5W5 647 aa17.86■□□□□ 0.45
SCAMP2-208ENST00000566557 POMGNT1Q8WZA1 660 aa17.86■□□□□ 0.45
SCAMP2-208ENST00000566557 SMARCE1Q969G3 411 aa17.86■□□□□ 0.45
SCAMP2-208ENST00000566557 ZFP42Q96MM3 310 aa17.86■□□□□ 0.45
SCAMP2-208ENST00000566557 MSTO1Q9BUK6 570 aa17.86■□□□□ 0.45
SCAMP2-208ENST00000566557 STRA6Q9BX79 667 aa17.86■□□□□ 0.45
SCAMP2-208ENST00000566557 TMEM206Q9H813 350 aa17.86■□□□□ 0.45
SCAMP2-208ENST00000566557 PTPRHQ9HD43 1115 aa17.86■□□□□ 0.45
SCAMP2-208ENST00000566557 LMBRD1Q9NUN5 540 aa17.86■□□□□ 0.45
SCAMP2-208ENST00000566557 GIT1Q9Y2X7 761 aa17.86■□□□□ 0.45
SCAMP2-208ENST00000566557 UBE4BO95155 1302 aa17.86■□□□□ 0.45
SCAMP2-208ENST00000566557 TDRD15B5MCY1 1934 aaKnown RBP17.86■□□□□ 0.45
SCAMP2-208ENST00000566557 ARL5CA6NH57 179 aa17.85■□□□□ 0.45
SCAMP2-208ENST00000566557 ABLIM1O14639 778 aa17.85■□□□□ 0.45
SCAMP2-208ENST00000566557 PSMD2Q13200 908 aa17.85■□□□□ 0.45
SCAMP2-208ENST00000566557 FBXO22Q8NEZ5 403 aa17.85■□□□□ 0.45
SCAMP2-208ENST00000566557 KHSRPQ92945 711 aaKnown RBP eCLIP17.85■□□□□ 0.45
SCAMP2-208ENST00000566557 FAM193BQ96PV7 902 aaPredicted RBP17.85■□□□□ 0.45
SCAMP2-208ENST00000566557 C11orf16Q9NQ32 467 aa17.85■□□□□ 0.45
SCAMP2-208ENST00000566557 TOPORSQ9NS56 1045 aaPredicted RBP17.85■□□□□ 0.45
SCAMP2-208ENST00000566557 TYW1Q9NV66 732 aaKnown RBP17.85■□□□□ 0.45
SCAMP2-208ENST00000566557 TBC1D13Q9NVG8 400 aa17.85■□□□□ 0.45
SCAMP2-208ENST00000566557 RMND1Q9NWS8 449 aa17.85■□□□□ 0.45
SCAMP2-208ENST00000566557 ZMYM2Q9UBW7 1377 aa17.85■□□□□ 0.45
SCAMP2-208ENST00000566557 OGTO15294 1046 aa17.84■□□□□ 0.45
SCAMP2-208ENST00000566557 ZC3H11AO75152 810 aaKnown RBP eCLIP17.84■□□□□ 0.45
SCAMP2-208ENST00000566557 RHOBTB3O94955 611 aa17.84■□□□□ 0.45
SCAMP2-208ENST00000566557 POU3F3P20264 500 aaPredicted RBP17.84■□□□□ 0.45
SCAMP2-208ENST00000566557 STK4Q13043 487 aa17.84■□□□□ 0.45
SCAMP2-208ENST00000566557 KCNB1Q14721 858 aa17.84■□□□□ 0.45
SCAMP2-208ENST00000566557 CAMK4Q16566 473 aa17.84■□□□□ 0.45
SCAMP2-208ENST00000566557 SLFN12LQ6IEE8 588 aa17.84■□□□□ 0.45
SCAMP2-208ENST00000566557 ARMCX5Q6P1M9 558 aa17.84■□□□□ 0.45
SCAMP2-208ENST00000566557 EPM2AIP1Q7L775 607 aaPredicted RBP17.84■□□□□ 0.45
SCAMP2-208ENST00000566557 TMEM192Q8IY95 271 aa17.84■□□□□ 0.45
SCAMP2-208ENST00000566557 KIAA0895Q8NCT3 520 aa17.84■□□□□ 0.45
SCAMP2-208ENST00000566557 SCFD1Q8WVM8 642 aa17.84■□□□□ 0.45
SCAMP2-208ENST00000566557 RSPH1Q8WYR4 309 aa17.84■□□□□ 0.45
SCAMP2-208ENST00000566557 HLA-CQ95604 372 aa17.84■□□□□ 0.45
SCAMP2-208ENST00000566557 SAMD11Q96NU1 681 aa17.84■□□□□ 0.45
SCAMP2-208ENST00000566557 ACAP3Q96P50 834 aa17.84■□□□□ 0.45
SCAMP2-208ENST00000566557 HAPLN2Q9GZV7 340 aa17.84■□□□□ 0.45
SCAMP2-208ENST00000566557 AAASQ9NRG9 546 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms