RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 HEPHQ9BQS7 1158 aa3.48□□□□□ -1.85
SMG1-212ENST00000566328 SLC29A3Q9BZD2 475 aa3.48□□□□□ -1.85
SMG1-212ENST00000566328 MTFR1LQ9H019 292 aa3.48□□□□□ -1.85
SMG1-212ENST00000566328 ALG13Q9NP73 1137 aaKnown RBP3.48□□□□□ -1.85
SMG1-212ENST00000566328 KMT5AQ9NQR1 393 aa3.48□□□□□ -1.85
SMG1-212ENST00000566328 SEMA4GQ9NTN9 838 aa3.48□□□□□ -1.85
SMG1-212ENST00000566328 H2AFY2Q9P0M6 372 aaPredicted RBP3.48□□□□□ -1.85
SMG1-212ENST00000566328 PRSS50Q9UI38 385 aa3.48□□□□□ -1.85
SMG1-212ENST00000566328 PRSS38A1L453 326 aa3.47□□□□□ -1.85
SMG1-212ENST00000566328 DRGXA6NNA5 263 aa3.47□□□□□ -1.85
SMG1-212ENST00000566328 SNRPA1P09661 255 aaKnown RBP3.47□□□□□ -1.85
SMG1-212ENST00000566328 FLT3LGP49771 235 aa3.47□□□□□ -1.85
SMG1-212ENST00000566328 KPNA1P52294 538 aaPredicted RBP3.47□□□□□ -1.85
SMG1-212ENST00000566328 PHC1P78364 1004 aa3.47□□□□□ -1.85
SMG1-212ENST00000566328 SART3Q15020 963 aaKnown RBP3.47□□□□□ -1.85
SMG1-212ENST00000566328 ATXN7L2Q5T6C5 722 aaPredicted RBP3.47□□□□□ -1.85
SMG1-212ENST00000566328 FRMD7Q6ZUT3 714 aa3.47□□□□□ -1.85
SMG1-212ENST00000566328 ARHGEF25Q86VW2 580 aa3.47□□□□□ -1.85
SMG1-212ENST00000566328 MAPKAPK5Q8IW41 473 aa3.47□□□□□ -1.85
SMG1-212ENST00000566328 FAM43AQ8N2R8 423 aa3.47□□□□□ -1.85
SMG1-212ENST00000566328 ZNF610Q8N9Z0 462 aa3.47□□□□□ -1.85
SMG1-212ENST00000566328 OR56A1Q8NGH5 318 aa3.47□□□□□ -1.85
SMG1-212ENST00000566328 MDM1Q8TC05 714 aa3.47□□□□□ -1.85
SMG1-212ENST00000566328 SCARB1Q8WTV0 552 aa3.47□□□□□ -1.85
SMG1-212ENST00000566328 PHACTR3Q96KR7 559 aa3.47□□□□□ -1.85
SMG1-212ENST00000566328 ALOXE3Q9BYJ1 711 aa3.47□□□□□ -1.85
SMG1-212ENST00000566328 GPRC5DQ9NZD1 345 aa3.47□□□□□ -1.85
SMG1-212ENST00000566328 SLC17A6Q9P2U8 582 aa3.47□□□□□ -1.85
SMG1-212ENST00000566328 RNF7Q9UBF6 113 aa3.47□□□□□ -1.85
SMG1-212ENST00000566328 DMTF1Q9Y222 760 aa3.47□□□□□ -1.85
SMG1-212ENST00000566328 POLR2AP24928 1970 aaKnown RBP3.46□□□□□ -1.86
SMG1-212ENST00000566328 E9PSI1 815 aa3.46□□□□□ -1.86
SMG1-212ENST00000566328 PHF2O75151 1096 aa3.46□□□□□ -1.86
SMG1-212ENST00000566328 RAB11FIP3O75154 756 aa3.46□□□□□ -1.86
SMG1-212ENST00000566328 RBMXL2O75526 392 aaKnown RBP3.46□□□□□ -1.86
SMG1-212ENST00000566328 MATN4O95460 622 aa3.46□□□□□ -1.86
SMG1-212ENST00000566328 SDSP20132 328 aa3.46□□□□□ -1.86
SMG1-212ENST00000566328 CRHR1P34998 444 aa3.46□□□□□ -1.86
SMG1-212ENST00000566328 ABCG1P45844 678 aa3.46□□□□□ -1.86
SMG1-212ENST00000566328 NEK4P51957 841 aa3.46□□□□□ -1.86
SMG1-212ENST00000566328 CHN2P52757 468 aa3.46□□□□□ -1.86
SMG1-212ENST00000566328 CLRN1P58418 232 aa3.46□□□□□ -1.86
SMG1-212ENST00000566328 MRPS35P82673 323 aaKnown RBP3.46□□□□□ -1.86
SMG1-212ENST00000566328 DSG1Q02413 1049 aa3.46□□□□□ -1.86
SMG1-212ENST00000566328 NFE2L2Q16236 605 aa3.46□□□□□ -1.86
SMG1-212ENST00000566328 FAM47AQ5JRC9 791 aa3.46□□□□□ -1.86
SMG1-212ENST00000566328 METRNLQ641Q3 311 aa3.46□□□□□ -1.86
SMG1-212ENST00000566328 GPR149Q86SP6 731 aa3.46□□□□□ -1.86
SMG1-212ENST00000566328 TMEM132CQ8N3T6 1108 aa3.46□□□□□ -1.86
SMG1-212ENST00000566328 SYNPOQ8N3V7 929 aa3.46□□□□□ -1.86
SMG1-212ENST00000566328 CHTF18Q8WVB6 975 aa3.46□□□□□ -1.86
SMG1-212ENST00000566328 FUBP1Q96AE4 644 aaKnown RBP3.46□□□□□ -1.86
SMG1-212ENST00000566328 BOD1Q96IK1 185 aa3.46□□□□□ -1.86
SMG1-212ENST00000566328 C8orf37Q96NL8 207 aa3.46□□□□□ -1.86
SMG1-212ENST00000566328 RNPEPQ9H4A4 650 aa3.46□□□□□ -1.86
SMG1-212ENST00000566328 GALNT9Q9HCQ5 603 aa3.46□□□□□ -1.86
SMG1-212ENST00000566328 CASS4Q9NQ75 786 aa3.46□□□□□ -1.86
SMG1-212ENST00000566328 TMEM74BQ9NUR3 256 aa3.46□□□□□ -1.86
SMG1-212ENST00000566328 THG1LQ9NWX6 298 aaKnown RBP3.46□□□□□ -1.86
SMG1-212ENST00000566328 EVLQ9UI08 416 aaPredicted RBP3.46□□□□□ -1.86
SMG1-212ENST00000566328 DNAJC9-AS1A6NH13 148 aa3.45□□□□□ -1.86
SMG1-212ENST00000566328 SCAPQ12770 1279 aa3.45□□□□□ -1.86
SMG1-212ENST00000566328 PABPC4Q13310 644 aaKnown RBP eCLIP3.45□□□□□ -1.86
SMG1-212ENST00000566328 RRP12Q5JTH9 1297 aaKnown RBP3.45□□□□□ -1.86
SMG1-212ENST00000566328 GJC2Q5T442 439 aaPredicted RBP3.45□□□□□ -1.86
SMG1-212ENST00000566328 KIAA1614Q5VZ46 1190 aa3.45□□□□□ -1.86
SMG1-212ENST00000566328 TSHZ3Q63HK5 1081 aa3.45□□□□□ -1.86
SMG1-212ENST00000566328 ABHD15Q6UXT9 468 aa3.45□□□□□ -1.86
SMG1-212ENST00000566328 C11orf74Q86VG3 221 aa3.45□□□□□ -1.86
SMG1-212ENST00000566328 PMFBP1Q8TBY8 1022 aa3.45□□□□□ -1.86
SMG1-212ENST00000566328 ZNF480Q8WV37 535 aa3.45□□□□□ -1.86
SMG1-212ENST00000566328 CEP95Q96GE4 821 aa3.45□□□□□ -1.86
SMG1-212ENST00000566328 NEU1Q99519 415 aa3.45□□□□□ -1.86
SMG1-212ENST00000566328 KLHL11Q9NVR0 708 aa3.45□□□□□ -1.86
SMG1-212ENST00000566328 RPTORQ8N122 1335 aa3.44□□□□□ -1.86
SMG1-212ENST00000566328 SALL3Q9BXA9 1300 aa3.44□□□□□ -1.86
SMG1-212ENST00000566328 A0A1B0GTW7 788 aa3.44□□□□□ -1.86
SMG1-212ENST00000566328 IKBKBO14920 756 aa3.44□□□□□ -1.86
SMG1-212ENST00000566328 PPP1R12AO14974 1030 aaPredicted RBP3.44□□□□□ -1.86
SMG1-212ENST00000566328 TGM5O43548 720 aa3.44□□□□□ -1.86
SMG1-212ENST00000566328 ORC4O43929 436 aa3.44□□□□□ -1.86
SMG1-212ENST00000566328 KPNA6O60684 536 aa3.44□□□□□ -1.86
SMG1-212ENST00000566328 POU3F2P20265 443 aaPredicted RBP3.44□□□□□ -1.86
SMG1-212ENST00000566328 CTSSP25774 331 aa3.44□□□□□ -1.86
SMG1-212ENST00000566328 PTPN7P35236 360 aa3.44□□□□□ -1.86
SMG1-212ENST00000566328 SCNN1BP51168 640 aa3.44□□□□□ -1.86
SMG1-212ENST00000566328 SRSF4Q08170 494 aaKnown RBP3.44□□□□□ -1.86
SMG1-212ENST00000566328 MAPK7Q13164 816 aa3.44□□□□□ -1.86
SMG1-212ENST00000566328 PRAMEF14Q5SWL7 426 aa3.44□□□□□ -1.86
SMG1-212ENST00000566328 FOXR2Q6PJQ5 311 aa3.44□□□□□ -1.86
SMG1-212ENST00000566328 FAM180AQ6UWF9 173 aa3.44□□□□□ -1.86
SMG1-212ENST00000566328 MED25Q71SY5 747 aa3.44□□□□□ -1.86
SMG1-212ENST00000566328 THNSL2Q86YJ6 484 aa3.44□□□□□ -1.86
SMG1-212ENST00000566328 DRC7Q8IY82 874 aa3.44□□□□□ -1.86
SMG1-212ENST00000566328 NXPE1Q8N323 547 aa3.44□□□□□ -1.86
SMG1-212ENST00000566328 ACTRT2Q8TDY3 377 aa3.44□□□□□ -1.86
SMG1-212ENST00000566328 RNF31Q96EP0 1072 aa3.44□□□□□ -1.86
SMG1-212ENST00000566328 FUBP3Q96I24 572 aaKnown RBP eCLIP3.44□□□□□ -1.86
SMG1-212ENST00000566328 PDLIM2Q96JY6 352 aa3.44□□□□□ -1.86
SMG1-212ENST00000566328 ANO3Q9BYT9 981 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms