RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 PRPHP41219 470 aa11.65□□□□□ -0.54
UBFD1-205ENST00000566136 NLRP5P59047 1200 aa11.65□□□□□ -0.54
UBFD1-205ENST00000566136 VPS52Q8N1B4 723 aa11.65□□□□□ -0.54
UBFD1-205ENST00000566136 VWA5B2Q8N398 1253 aa11.65□□□□□ -0.54
UBFD1-205ENST00000566136 TTLL11Q8NHH1 800 aa11.65□□□□□ -0.54
UBFD1-205ENST00000566136 TMEM237Q96Q45 408 aa11.65□□□□□ -0.54
UBFD1-205ENST00000566136 NUP88Q99567 741 aaPredicted RBP11.65□□□□□ -0.54
UBFD1-205ENST00000566136 TM9SF2Q99805 663 aa11.65□□□□□ -0.54
UBFD1-205ENST00000566136 NRXN2Q9P2S2 1712 aa11.65□□□□□ -0.54
UBFD1-205ENST00000566136 ORC3Q9UBD5 711 aaPredicted RBP11.65□□□□□ -0.54
UBFD1-205ENST00000566136 SUSD2Q9UGT4 822 aa11.65□□□□□ -0.54
UBFD1-205ENST00000566136 TRMT112Q9UI30 125 aaKnown RBP11.65□□□□□ -0.54
UBFD1-205ENST00000566136 FIGNL2A6NMB9 653 aa11.64□□□□□ -0.55
UBFD1-205ENST00000566136 FAM177BA6PVY3 158 aa11.64□□□□□ -0.55
UBFD1-205ENST00000566136 RHPN2P1A8MT19 583 aa11.64□□□□□ -0.55
UBFD1-205ENST00000566136 SPTLC2O15270 562 aa11.64□□□□□ -0.55
UBFD1-205ENST00000566136 LILRA1O75019 489 aa11.64□□□□□ -0.55
UBFD1-205ENST00000566136 TPPPO94811 219 aa11.64□□□□□ -0.55
UBFD1-205ENST00000566136 CAMTA2O94983 1202 aa11.64□□□□□ -0.55
UBFD1-205ENST00000566136 NPTXRO95502 500 aa11.64□□□□□ -0.55
UBFD1-205ENST00000566136 MSNP26038 577 aaKnown RBP11.64□□□□□ -0.55
UBFD1-205ENST00000566136 HIRAP54198 1017 aaPredicted RBP11.64□□□□□ -0.55
UBFD1-205ENST00000566136 TATDN1Q6P1N9 297 aa11.64□□□□□ -0.55
UBFD1-205ENST00000566136 ALKBH5Q6P6C2 394 aaKnown RBP11.64□□□□□ -0.55
UBFD1-205ENST00000566136 POMZP3Q6PJE2 187 aa11.64□□□□□ -0.55
UBFD1-205ENST00000566136 C2CD5Q86YS7 1000 aa11.64□□□□□ -0.55
UBFD1-205ENST00000566136 TMEM40Q8WWA1 233 aa11.64□□□□□ -0.55
UBFD1-205ENST00000566136 NIFKQ9BYG3 293 aaKnown RBP11.64□□□□□ -0.55
UBFD1-205ENST00000566136 TXLNGYQ9BZA5 131 aa11.64□□□□□ -0.55
UBFD1-205ENST00000566136 CNNM1Q9NRU3 951 aa11.64□□□□□ -0.55
UBFD1-205ENST00000566136 F8W8V4 182 aa11.64□□□□□ -0.55
UBFD1-205ENST00000566136 ZBED4O75132 1171 aa11.64□□□□□ -0.55
UBFD1-205ENST00000566136 IMPDH2P12268 514 aa11.64□□□□□ -0.55
UBFD1-205ENST00000566136 DPP6P42658 865 aa11.64□□□□□ -0.55
UBFD1-205ENST00000566136 POLD2P49005 469 aa11.64□□□□□ -0.55
UBFD1-205ENST00000566136 PAPOLAP51003 745 aaKnown RBP11.64□□□□□ -0.55
UBFD1-205ENST00000566136 CTSWP56202 376 aa11.64□□□□□ -0.55
UBFD1-205ENST00000566136 SUMO1P63165 101 aaKnown RBP11.64□□□□□ -0.55
UBFD1-205ENST00000566136 RASA2Q15283 850 aa11.64□□□□□ -0.55
UBFD1-205ENST00000566136 C7orf25Q9BPX7 421 aa11.64□□□□□ -0.55
UBFD1-205ENST00000566136 EPN1Q9Y6I3 576 aaPredicted RBP11.64□□□□□ -0.55
UBFD1-205ENST00000566136 POM121BA6NF01 834 aa11.63□□□□□ -0.55
UBFD1-205ENST00000566136 H3BQV1 296 aa11.63□□□□□ -0.55
UBFD1-205ENST00000566136 FOXP2O15409 715 aa11.63□□□□□ -0.55
UBFD1-205ENST00000566136 KRT1P04264 644 aa11.63□□□□□ -0.55
UBFD1-205ENST00000566136 FSHRP23945 695 aa11.63□□□□□ -0.55
UBFD1-205ENST00000566136 STARD3Q14849 445 aa11.63□□□□□ -0.55
UBFD1-205ENST00000566136 NCAPHQ15003 741 aa11.63□□□□□ -0.55
UBFD1-205ENST00000566136 HSF5Q4G112 596 aaPredicted RBP11.63□□□□□ -0.55
UBFD1-205ENST00000566136 IFFO2Q5TF58 517 aa11.63□□□□□ -0.55
UBFD1-205ENST00000566136 ZNF619Q8N2I2 560 aa11.63□□□□□ -0.55
UBFD1-205ENST00000566136 FAM184AQ8NB25 1140 aa11.63□□□□□ -0.55
UBFD1-205ENST00000566136 GOT1L1Q8NHS2 421 aaPredicted RBP11.63□□□□□ -0.55
UBFD1-205ENST00000566136 UNC45AQ9H3U1 944 aa11.63□□□□□ -0.55
UBFD1-205ENST00000566136 SNX13Q9Y5W8 968 aa11.63□□□□□ -0.55
UBFD1-205ENST00000566136 SCN7AQ01118 1682 aa11.63□□□□□ -0.55
UBFD1-205ENST00000566136 PFKFB2O60825 505 aa11.63□□□□□ -0.55
UBFD1-205ENST00000566136 HTR3BO95264 441 aa11.63□□□□□ -0.55
UBFD1-205ENST00000566136 CTDNEP1O95476 244 aa11.63□□□□□ -0.55
UBFD1-205ENST00000566136 MCAMP43121 646 aa11.63□□□□□ -0.55
UBFD1-205ENST00000566136 GPR3P46089 330 aa11.63□□□□□ -0.55
UBFD1-205ENST00000566136 CNN3Q15417 329 aaKnown RBP11.63□□□□□ -0.55
UBFD1-205ENST00000566136 CAMK4Q16566 473 aa11.63□□□□□ -0.55
UBFD1-205ENST00000566136 PRR5LQ6MZQ0 368 aa11.63□□□□□ -0.55
UBFD1-205ENST00000566136 GPR153Q6NV75 609 aa11.63□□□□□ -0.55
UBFD1-205ENST00000566136 PIP4P2Q8N4L2 257 aa11.63□□□□□ -0.55
UBFD1-205ENST00000566136 IGSF22Q8N9C0 903 aa11.63□□□□□ -0.55
UBFD1-205ENST00000566136 ZNF540Q8NDQ6 660 aa11.63□□□□□ -0.55
UBFD1-205ENST00000566136 NSUN7Q8NE18 718 aaKnown RBP11.63□□□□□ -0.55
UBFD1-205ENST00000566136 GSDMBQ8TAX9 411 aa11.63□□□□□ -0.55
UBFD1-205ENST00000566136 ZUFSPQ96AP4 578 aa11.63□□□□□ -0.55
UBFD1-205ENST00000566136 C1QTNF2Q9BXJ5 285 aa11.63□□□□□ -0.55
UBFD1-205ENST00000566136 STARD7Q9NQZ5 370 aa11.63□□□□□ -0.55
UBFD1-205ENST00000566136 KRT84Q9NSB2 600 aa11.63□□□□□ -0.55
UBFD1-205ENST00000566136 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.63□□□□□ -0.55
UBFD1-205ENST00000566136 CGNQ9P2M7 1197 aaKnown RBP11.63□□□□□ -0.55
UBFD1-205ENST00000566136 PCDHA11Q9Y5I1 949 aa11.63□□□□□ -0.55
UBFD1-205ENST00000566136 UBN2Q6ZU65 1347 aa11.62□□□□□ -0.55
UBFD1-205ENST00000566136 CDHR2Q9BYE9 1310 aa11.62□□□□□ -0.55
UBFD1-205ENST00000566136 PTPDC1A2A3K4 754 aa11.62□□□□□ -0.55
UBFD1-205ENST00000566136 MUSKO15146 869 aa11.62□□□□□ -0.55
UBFD1-205ENST00000566136 CSPG5O95196 566 aa11.62□□□□□ -0.55
UBFD1-205ENST00000566136 POTEIP0CG38 1075 aa11.62□□□□□ -0.55
UBFD1-205ENST00000566136 XBP1P17861 261 aa11.62□□□□□ -0.55
UBFD1-205ENST00000566136 RPL17P18621 184 aaKnown RBP11.62□□□□□ -0.55
UBFD1-205ENST00000566136 HOXD13P35453 343 aa11.62□□□□□ -0.55
UBFD1-205ENST00000566136 LIMK1P53667 647 aa11.62□□□□□ -0.55
UBFD1-205ENST00000566136 UBXN1Q04323 297 aa11.62□□□□□ -0.55
UBFD1-205ENST00000566136 RESTQ13127 1097 aa11.62□□□□□ -0.55
UBFD1-205ENST00000566136 PDCD1Q15116 288 aa11.62□□□□□ -0.55
UBFD1-205ENST00000566136 SRGAP1Q7Z6B7 1085 aa11.62□□□□□ -0.55
UBFD1-205ENST00000566136 SDCCAG8Q86SQ7 713 aaPredicted RBP11.62□□□□□ -0.55
UBFD1-205ENST00000566136 ANKRD35Q8N283 1001 aa11.62□□□□□ -0.55
UBFD1-205ENST00000566136 RNF181Q9P0P0 153 aa11.62□□□□□ -0.55
UBFD1-205ENST00000566136 PCDHA8Q9Y5H6 950 aa11.62□□□□□ -0.55
UBFD1-205ENST00000566136 SPEF2Q9C093 1822 aa11.62□□□□□ -0.55
UBFD1-205ENST00000566136 NUP98P52948 1817 aa11.62□□□□□ -0.55
UBFD1-205ENST00000566136 AQP12BA6NM10 295 aa11.62□□□□□ -0.55
UBFD1-205ENST00000566136 FAM227AF5H4B4 570 aa11.62□□□□□ -0.55
UBFD1-205ENST00000566136 H0YIN7 160 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms