RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 RABGGTAQ92696 567 aa17.26■□□□□ 0.35
CDH3-204ENST00000565453 PNMA5Q96PV4 448 aa17.26■□□□□ 0.35
CDH3-204ENST00000565453 ADPGKQ9BRR6 497 aa17.26■□□□□ 0.35
CDH3-204ENST00000565453 DAXXQ9UER7 740 aaPredicted RBP17.26■□□□□ 0.35
CDH3-204ENST00000565453 ADAM28Q9UKQ2 775 aa17.26■□□□□ 0.35
CDH3-204ENST00000565453 PLXNA3P51805 1871 aa17.26■□□□□ 0.35
CDH3-204ENST00000565453 H3BQV1 296 aa17.25■□□□□ 0.35
CDH3-204ENST00000565453 HIP1RO75146 1068 aa17.25■□□□□ 0.35
CDH3-204ENST00000565453 PEX3P56589 373 aa17.25■□□□□ 0.35
CDH3-204ENST00000565453 SIGLEC14Q08ET2 396 aa17.25■□□□□ 0.35
CDH3-204ENST00000565453 HSP90AA2PQ14568 343 aaPredicted RBP17.25■□□□□ 0.35
CDH3-204ENST00000565453 TMEM132AQ24JP5 1023 aa17.25■□□□□ 0.35
CDH3-204ENST00000565453 DCAF4L1Q3SXM0 396 aa17.25■□□□□ 0.35
CDH3-204ENST00000565453 ATF7IP2Q5U623 682 aa17.25■□□□□ 0.35
CDH3-204ENST00000565453 TAS1R3Q7RTX0 852 aa17.25■□□□□ 0.35
CDH3-204ENST00000565453 CMASQ8NFW8 434 aaPredicted RBP17.25■□□□□ 0.35
CDH3-204ENST00000565453 B3GALT6Q96L58 329 aa17.25■□□□□ 0.35
CDH3-204ENST00000565453 MAN1C1Q9NR34 630 aa17.25■□□□□ 0.35
CDH3-204ENST00000565453 TSHZ2Q9NRE2 1034 aa17.25■□□□□ 0.35
CDH3-204ENST00000565453 ARHGAP28Q9P2N2 729 aa17.25■□□□□ 0.35
CDH3-204ENST00000565453 SMC3Q9UQE7 1217 aa17.25■□□□□ 0.35
CDH3-204ENST00000565453 PHLPP2Q6ZVD8 1323 aa17.24■□□□□ 0.35
CDH3-204ENST00000565453 K7ERI5 159 aa17.24■□□□□ 0.35
CDH3-204ENST00000565453 PAPLNO95428 1278 aa17.24■□□□□ 0.35
CDH3-204ENST00000565453 THP07101 528 aa17.24■□□□□ 0.35
CDH3-204ENST00000565453 ADH1AP07327 375 aa17.24■□□□□ 0.35
CDH3-204ENST00000565453 USP41Q3LFD5 358 aa17.24■□□□□ 0.35
CDH3-204ENST00000565453 ARL6IP4Q66PJ3 421 aaKnown RBP17.24■□□□□ 0.35
CDH3-204ENST00000565453 ZDHHC14Q8IZN3 488 aa17.24■□□□□ 0.35
CDH3-204ENST00000565453 ASIC4Q96FT7 647 aa17.24■□□□□ 0.35
CDH3-204ENST00000565453 MFSD14AQ96MC6 490 aa17.24■□□□□ 0.35
CDH3-204ENST00000565453 ACO2Q99798 780 aaKnown RBP17.24■□□□□ 0.35
CDH3-204ENST00000565453 TMEM134Q9H6X4 195 aa17.24■□□□□ 0.35
CDH3-204ENST00000565453 PTPRHQ9HD43 1115 aa17.24■□□□□ 0.35
CDH3-204ENST00000565453 FNIP2Q9P278 1114 aa17.24■□□□□ 0.35
CDH3-204ENST00000565453 TNFSF13BQ9Y275 285 aa17.24■□□□□ 0.35
CDH3-204ENST00000565453 USTQ9Y2C2 406 aa17.24■□□□□ 0.35
CDH3-204ENST00000565453 VWA3AA6NCI4 1184 aa17.23■□□□□ 0.35
CDH3-204ENST00000565453 CASTOR2A6NHX0 329 aa17.23■□□□□ 0.35
CDH3-204ENST00000565453 CCDC169A6NNP5 214 aa17.23■□□□□ 0.35
CDH3-204ENST00000565453 TADA2AO75478 443 aa17.23■□□□□ 0.35
CDH3-204ENST00000565453 KIF4AO95239 1232 aa17.23■□□□□ 0.35
CDH3-204ENST00000565453 GLUD1P00367 558 aa17.23■□□□□ 0.35
CDH3-204ENST00000565453 C1RP00736 705 aa17.23■□□□□ 0.35
CDH3-204ENST00000565453 GUCY2CP25092 1073 aa17.23■□□□□ 0.35
CDH3-204ENST00000565453 TMEM119Q4V9L6 283 aa17.23■□□□□ 0.35
CDH3-204ENST00000565453 RTP2Q5QGT7 225 aa17.23■□□□□ 0.35
CDH3-204ENST00000565453 C15orf39Q6ZRI6 1047 aa17.23■□□□□ 0.35
CDH3-204ENST00000565453 KCTD17Q8N5Z5 321 aa17.23■□□□□ 0.35
CDH3-204ENST00000565453 DRC1Q96MC2 740 aa17.23■□□□□ 0.35
CDH3-204ENST00000565453 RHOBTB2Q9BYZ6 727 aa17.23■□□□□ 0.35
CDH3-204ENST00000565453 CDT1Q9H211 546 aa17.23■□□□□ 0.35
CDH3-204ENST00000565453 C17orf75Q9HAS0 396 aa17.23■□□□□ 0.35
CDH3-204ENST00000565453 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.23■□□□□ 0.35
CDH3-204ENST00000565453 GDAQ9Y2T3 454 aa17.23■□□□□ 0.35
CDH3-204ENST00000565453 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.23■□□□□ 0.35
CDH3-204ENST00000565453 ZNF318Q5VUA4 2279 aa17.23■□□□□ 0.35
CDH3-204ENST00000565453 C2orf16Q68DN1 1984 aa17.22■□□□□ 0.35
CDH3-204ENST00000565453 ABLIM1O14639 778 aa17.22■□□□□ 0.35
CDH3-204ENST00000565453 DMP1Q13316 513 aaPredicted RBP17.22■□□□□ 0.35
CDH3-204ENST00000565453 CUL4AQ13619 759 aa17.22■□□□□ 0.35
CDH3-204ENST00000565453 LARP1BQ659C4 914 aaKnown RBP17.22■□□□□ 0.35
CDH3-204ENST00000565453 LILRA6Q6PI73 481 aa17.22■□□□□ 0.35
CDH3-204ENST00000565453 SYT2Q8N9I0 419 aaPredicted RBP17.22■□□□□ 0.35
CDH3-204ENST00000565453 TDRD5Q8NAT2 981 aaKnown RBP17.22■□□□□ 0.35
CDH3-204ENST00000565453 KREMEN2Q8NCW0 462 aa17.22■□□□□ 0.35
CDH3-204ENST00000565453 HDAC7Q8WUI4 952 aa17.22■□□□□ 0.35
CDH3-204ENST00000565453 RIN2Q8WYP3 895 aaPredicted RBP17.22■□□□□ 0.35
CDH3-204ENST00000565453 PPP1R10Q96QC0 940 aaKnown RBP17.22■□□□□ 0.35
CDH3-204ENST00000565453 NTPCRQ9BSD7 190 aaKnown RBP17.22■□□□□ 0.35
CDH3-204ENST00000565453 TIPINQ9BVW5 301 aa17.22■□□□□ 0.35
CDH3-204ENST00000565453 KCNH6Q9H252 994 aa17.22■□□□□ 0.35
CDH3-204ENST00000565453 KMT5AQ9NQR1 393 aa17.22■□□□□ 0.35
CDH3-204ENST00000565453 SF3B1O75533 1304 aaKnown RBP eCLIP17.21■□□□□ 0.35
CDH3-204ENST00000565453 SFI1A8K8P3 1242 aa17.21■□□□□ 0.35
CDH3-204ENST00000565453 TGM5O43548 720 aa17.21■□□□□ 0.35
CDH3-204ENST00000565453 PROZP22891 400 aa17.21■□□□□ 0.35
CDH3-204ENST00000565453 IGFBP6P24592 240 aaPredicted RBP17.21■□□□□ 0.35
CDH3-204ENST00000565453 GRM5P41594 1212 aa17.21■□□□□ 0.35
CDH3-204ENST00000565453 SLC12A3P55017 1021 aa17.21■□□□□ 0.35
CDH3-204ENST00000565453 ZRSR1Q15695 479 aaKnown RBP17.21■□□□□ 0.35
CDH3-204ENST00000565453 XKR4Q5GH76 650 aa17.21■□□□□ 0.35
CDH3-204ENST00000565453 PRSS55Q6UWB4 352 aaPredicted RBP17.21■□□□□ 0.35
CDH3-204ENST00000565453 CD300LGQ6UXG3 332 aa17.21■□□□□ 0.35
CDH3-204ENST00000565453 CEP120Q8N960 986 aa17.21■□□□□ 0.35
CDH3-204ENST00000565453 HASPINQ8TF76 798 aa17.21■□□□□ 0.35
CDH3-204ENST00000565453 SPIRE2Q8WWL2 714 aa17.21■□□□□ 0.35
CDH3-204ENST00000565453 PBXIP1Q96AQ6 731 aa17.21■□□□□ 0.35
CDH3-204ENST00000565453 PLIN2Q99541 437 aa17.21■□□□□ 0.35
CDH3-204ENST00000565453 TARS2Q9BW92 718 aaKnown RBP17.21■□□□□ 0.35
CDH3-204ENST00000565453 MRPL4Q9BYD3 311 aaKnown RBP17.21■□□□□ 0.35
CDH3-204ENST00000565453 NT5C3AQ9H0P0 336 aa17.21■□□□□ 0.35
CDH3-204ENST00000565453 SORCS3Q9UPU3 1222 aa17.21■□□□□ 0.35
CDH3-204ENST00000565453 RBM19Q9Y4C8 960 aaKnown RBP17.21■□□□□ 0.35
CDH3-204ENST00000565453 CCDC195A0A1B0GUA6 201 aa17.2■□□□□ 0.34
CDH3-204ENST00000565453 SPDYE4A6NLX3 237 aa17.2■□□□□ 0.34
CDH3-204ENST00000565453 TMEM189-UBE2V1I3L0A0 370 aa17.2■□□□□ 0.34
CDH3-204ENST00000565453 SLC16A4O15374 487 aa17.2■□□□□ 0.34
CDH3-204ENST00000565453 RFPL2O75678 378 aa17.2■□□□□ 0.34
CDH3-204ENST00000565453 BRD1O95696 1058 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms