RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 SNTG2Q9NY99 539 aa9.5□□□□□ -0.89
CAPN3-213ENST00000565173 EPS15L1Q9UBC2 864 aa9.5□□□□□ -0.89
CAPN3-213ENST00000565173 PARP2Q9UGN5 583 aa9.5□□□□□ -0.89
CAPN3-213ENST00000565173 DPP7Q9UHL4 492 aa9.5□□□□□ -0.89
CAPN3-213ENST00000565173 DUSP12Q9UNI6 340 aa9.5□□□□□ -0.89
CAPN3-213ENST00000565173 USP20Q9Y2K6 914 aa9.5□□□□□ -0.89
CAPN3-213ENST00000565173 TDRD15B5MCY1 1934 aaKnown RBP9.5□□□□□ -0.89
CAPN3-213ENST00000565173 SPDYE4A6NLX3 237 aa9.49□□□□□ -0.89
CAPN3-213ENST00000565173 NARSO43776 548 aaKnown RBP9.49□□□□□ -0.89
CAPN3-213ENST00000565173 ST18O60284 1047 aa9.49□□□□□ -0.89
CAPN3-213ENST00000565173 RPL17P18621 184 aaKnown RBP9.49□□□□□ -0.89
CAPN3-213ENST00000565173 CYP11B2P19099 503 aa9.49□□□□□ -0.89
CAPN3-213ENST00000565173 IGFBP6P24592 240 aaPredicted RBP9.49□□□□□ -0.89
CAPN3-213ENST00000565173 TUSC3Q13454 348 aa9.49□□□□□ -0.89
CAPN3-213ENST00000565173 HSP90AA2PQ14568 343 aaPredicted RBP9.49□□□□□ -0.89
CAPN3-213ENST00000565173 ZNF174Q15697 407 aa9.49□□□□□ -0.89
CAPN3-213ENST00000565173 RTP2Q5QGT7 225 aa9.49□□□□□ -0.89
CAPN3-213ENST00000565173 PADI6Q6TGC4 694 aa9.49□□□□□ -0.89
CAPN3-213ENST00000565173 SLC44A3Q8N4M1 653 aa9.49□□□□□ -0.89
CAPN3-213ENST00000565173 FBXO18Q8NFZ0 1043 aa9.49□□□□□ -0.89
CAPN3-213ENST00000565173 LNX1Q8TBB1 728 aaPredicted RBP9.49□□□□□ -0.89
CAPN3-213ENST00000565173 RIN2Q8WYP3 895 aaPredicted RBP9.49□□□□□ -0.89
CAPN3-213ENST00000565173 SMG7Q92540 1137 aaKnown RBP9.49□□□□□ -0.89
CAPN3-213ENST00000565173 CCDC43Q96MW1 224 aaKnown RBP9.49□□□□□ -0.89
CAPN3-213ENST00000565173 CLSTN3Q9BQT9 956 aa9.49□□□□□ -0.89
CAPN3-213ENST00000565173 LLPHQ9BRT6 129 aaKnown RBP9.49□□□□□ -0.89
CAPN3-213ENST00000565173 FOXP1Q9H334 677 aaPredicted RBP9.49□□□□□ -0.89
CAPN3-213ENST00000565173 POLD4Q9HCU8 107 aa9.49□□□□□ -0.89
CAPN3-213ENST00000565173 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.49□□□□□ -0.89
CAPN3-213ENST00000565173 IGSF9Q9P2J2 1179 aa9.49□□□□□ -0.89
CAPN3-213ENST00000565173 LIMCH1Q9UPQ0 1083 aa9.49□□□□□ -0.89
CAPN3-213ENST00000565173 CLUHO75153 1309 aa9.49□□□□□ -0.89
CAPN3-213ENST00000565173 DMXL1Q9Y485 3027 aa9.48□□□□□ -0.89
CAPN3-213ENST00000565173 KRBA1A5PL33 1030 aa9.48□□□□□ -0.89
CAPN3-213ENST00000565173 CASTOR2A6NHX0 329 aa9.48□□□□□ -0.89
CAPN3-213ENST00000565173 ACKR2O00590 384 aa9.48□□□□□ -0.89
CAPN3-213ENST00000565173 N4BP3O15049 544 aa9.48□□□□□ -0.89
CAPN3-213ENST00000565173 ADAM12O43184 909 aa9.48□□□□□ -0.89
CAPN3-213ENST00000565173 GFRA3O60609 400 aa9.48□□□□□ -0.89
CAPN3-213ENST00000565173 TADA2AO75478 443 aa9.48□□□□□ -0.89
CAPN3-213ENST00000565173 RECQL4O94761 1208 aa9.48□□□□□ -0.89
CAPN3-213ENST00000565173 KIF4AO95239 1232 aa9.48□□□□□ -0.89
CAPN3-213ENST00000565173 OR52Z1P0C646 297 aa9.48□□□□□ -0.89
CAPN3-213ENST00000565173 AOC1P19801 751 aa9.48□□□□□ -0.89
CAPN3-213ENST00000565173 MUTP22033 750 aa9.48□□□□□ -0.89
CAPN3-213ENST00000565173 NBL1P41271 181 aa9.48□□□□□ -0.89
CAPN3-213ENST00000565173 ORC2Q13416 577 aaPredicted RBP9.48□□□□□ -0.89
CAPN3-213ENST00000565173 PRPF4BQ13523 1007 aaKnown RBP9.48□□□□□ -0.89
CAPN3-213ENST00000565173 SAFBQ15424 915 aaKnown RBP eCLIP9.48□□□□□ -0.89
CAPN3-213ENST00000565173 MAPK6Q16659 721 aa9.48□□□□□ -0.89
CAPN3-213ENST00000565173 NT5DC1Q5TFE4 455 aa9.48□□□□□ -0.89
CAPN3-213ENST00000565173 EEF1DP3Q658K8 133 aa9.48□□□□□ -0.89
CAPN3-213ENST00000565173 PRSS55Q6UWB4 352 aaPredicted RBP9.48□□□□□ -0.89
CAPN3-213ENST00000565173 ASCL5Q7RTU5 278 aa9.48□□□□□ -0.89
CAPN3-213ENST00000565173 NOSTRINQ8IVI9 506 aa9.48□□□□□ -0.89
CAPN3-213ENST00000565173 GLYCTKQ8IVS8 523 aa9.48□□□□□ -0.89
CAPN3-213ENST00000565173 CCDC83Q8IWF9 413 aa9.48□□□□□ -0.89
CAPN3-213ENST00000565173 ZBTB8OSQ8IWT0 167 aa9.48□□□□□ -0.89
CAPN3-213ENST00000565173 SIX5Q8N196 739 aa9.48□□□□□ -0.89
CAPN3-213ENST00000565173 FLCNQ8NFG4 579 aa9.48□□□□□ -0.89
CAPN3-213ENST00000565173 HASPINQ8TF76 798 aa9.48□□□□□ -0.89
CAPN3-213ENST00000565173 STAMQ92783 540 aa9.48□□□□□ -0.89
CAPN3-213ENST00000565173 KIF2CQ99661 725 aa9.48□□□□□ -0.89
CAPN3-213ENST00000565173 PRKD2Q9BZL6 878 aa9.48□□□□□ -0.89
CAPN3-213ENST00000565173 C2orf40Q9H1Z8 148 aa9.48□□□□□ -0.89
CAPN3-213ENST00000565173 MFSD1Q9H3U5 465 aa9.48□□□□□ -0.89
CAPN3-213ENST00000565173 ZDHHC7Q9NXF8 308 aa9.48□□□□□ -0.89
CAPN3-213ENST00000565173 MTCL1Q9Y4B5 1905 aaKnown RBP9.48□□□□□ -0.89
CAPN3-213ENST00000565173 ZNF292O60281 2723 aa9.47□□□□□ -0.89
CAPN3-213ENST00000565173 DNAH14Q0VDD8 3507 aa9.47□□□□□ -0.89
CAPN3-213ENST00000565173 ARHGEF35A5YM69 484 aa9.47□□□□□ -0.89
CAPN3-213ENST00000565173 ANHXE9PGG2 379 aa9.47□□□□□ -0.89
CAPN3-213ENST00000565173 ZMYND10O75800 440 aa9.47□□□□□ -0.89
CAPN3-213ENST00000565173 PRKCBP05771 671 aa9.47□□□□□ -0.89
CAPN3-213ENST00000565173 THP07101 528 aa9.47□□□□□ -0.89
CAPN3-213ENST00000565173 LAMP2P13473 410 aa9.47□□□□□ -0.89
CAPN3-213ENST00000565173 GBP2P32456 591 aaPredicted RBP9.47□□□□□ -0.89
CAPN3-213ENST00000565173 NAMPTP43490 491 aa9.47□□□□□ -0.89
CAPN3-213ENST00000565173 RBM25P49756 843 aaKnown RBP9.47□□□□□ -0.89
CAPN3-213ENST00000565173 TOB1P50616 345 aaPredicted RBP9.47□□□□□ -0.89
CAPN3-213ENST00000565173 FXR2P51116 673 aaKnown RBP eCLIP9.47□□□□□ -0.89
CAPN3-213ENST00000565173 PDIA5Q14554 519 aa9.47□□□□□ -0.89
CAPN3-213ENST00000565173 NBR1Q14596 966 aa9.47□□□□□ -0.89
CAPN3-213ENST00000565173 TTC38Q5R3I4 469 aa9.47□□□□□ -0.89
CAPN3-213ENST00000565173 FAM171A1Q5VUB5 890 aa9.47□□□□□ -0.89
CAPN3-213ENST00000565173 ERICH6BQ5W0A0 696 aa9.47□□□□□ -0.89
CAPN3-213ENST00000565173 ELMSAN1Q6PJG2 1045 aa9.47□□□□□ -0.89
CAPN3-213ENST00000565173 CD300LGQ6UXG3 332 aa9.47□□□□□ -0.89
CAPN3-213ENST00000565173 ERMNQ8TAM6 284 aa9.47□□□□□ -0.89
CAPN3-213ENST00000565173 PIK3R5Q8WYR1 880 aa9.47□□□□□ -0.89
CAPN3-213ENST00000565173 NXPE3Q969Y0 559 aa9.47□□□□□ -0.89
CAPN3-213ENST00000565173 C8orf76Q96K31 380 aa9.47□□□□□ -0.89
CAPN3-213ENST00000565173 TTPALQ9BTX7 342 aa9.47□□□□□ -0.89
CAPN3-213ENST00000565173 KIFC3Q9BVG8 833 aa9.47□□□□□ -0.89
CAPN3-213ENST00000565173 BHMT2Q9H2M3 363 aa9.47□□□□□ -0.89
CAPN3-213ENST00000565173 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.47□□□□□ -0.89
CAPN3-213ENST00000565173 WNT16Q9UBV4 365 aa9.47□□□□□ -0.89
CAPN3-213ENST00000565173 DOCK8Q8NF50 2099 aa9.47□□□□□ -0.89
CAPN3-213ENST00000565173 SF3B1O75533 1304 aaKnown RBP eCLIP9.47□□□□□ -0.89
CAPN3-213ENST00000565173 CFHP08603 1231 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms