RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 C12orf65Q9H3J6 166 aaKnown RBP21.92■■□□□ 1.1
MAP1LC3B-206ENST00000564844 ZBTB21Q9ULJ3 1066 aa21.92■■□□□ 1.1
MAP1LC3B-206ENST00000564844 ROBO1Q9Y6N7 1651 aa21.92■■□□□ 1.1
MAP1LC3B-206ENST00000564844 ALADP13716 330 aa21.91■■□□□ 1.1
MAP1LC3B-206ENST00000564844 RHOT2Q8IXI1 618 aa21.91■■□□□ 1.1
MAP1LC3B-206ENST00000564844 CNBD1Q8NA66 436 aa21.91■■□□□ 1.1
MAP1LC3B-206ENST00000564844 CCDC134Q9H6E4 229 aa21.91■■□□□ 1.1
MAP1LC3B-206ENST00000564844 ALG13Q9NP73 1137 aaKnown RBP21.91■■□□□ 1.1
MAP1LC3B-206ENST00000564844 R3HDM2Q9Y2K5 976 aaKnown RBP21.91■■□□□ 1.1
MAP1LC3B-206ENST00000564844 RREB1Q92766 1687 aa21.91■■□□□ 1.1
MAP1LC3B-206ENST00000564844 O00370 1275 aa21.91■■□□□ 1.1
MAP1LC3B-206ENST00000564844 ZFYVE27Q5T4F4 411 aa21.91■■□□□ 1.1
MAP1LC3B-206ENST00000564844 NOP9Q86U38 636 aaKnown RBP21.91■■□□□ 1.1
MAP1LC3B-206ENST00000564844 PPP1R12CQ9BZL4 782 aa21.91■■□□□ 1.1
MAP1LC3B-206ENST00000564844 NYXQ9GZU5 481 aa21.91■■□□□ 1.1
MAP1LC3B-206ENST00000564844 DIS3Q9Y2L1 958 aaKnown RBP21.91■■□□□ 1.1
MAP1LC3B-206ENST00000564844 XIRP1Q702N8 1843 aaKnown RBP21.91■■□□□ 1.1
MAP1LC3B-206ENST00000564844 SNHG28P0DPA3 235 aa21.91■■□□□ 1.1
MAP1LC3B-206ENST00000564844 NFIAQ12857 509 aa21.91■■□□□ 1.1
MAP1LC3B-206ENST00000564844 CDCA2Q69YH5 1023 aaPredicted RBP21.91■■□□□ 1.1
MAP1LC3B-206ENST00000564844 FBF1Q8TES7 1133 aa21.91■■□□□ 1.1
MAP1LC3B-206ENST00000564844 DHX38Q92620 1227 aaKnown RBP21.91■■□□□ 1.1
MAP1LC3B-206ENST00000564844 PARVGQ9HBI0 331 aa21.91■■□□□ 1.1
MAP1LC3B-206ENST00000564844 CCNL1Q9UK58 526 aaPredicted RBP21.91■■□□□ 1.1
MAP1LC3B-206ENST00000564844 G3V3G9 751 aa21.9■■□□□ 1.1
MAP1LC3B-206ENST00000564844 SLC16A3O15427 465 aaKnown RBP21.9■■□□□ 1.1
MAP1LC3B-206ENST00000564844 SMIM24O75264 130 aa21.9■■□□□ 1.1
MAP1LC3B-206ENST00000564844 GDF11O95390 407 aa21.9■■□□□ 1.1
MAP1LC3B-206ENST00000564844 TAC1P20366 129 aa21.9■■□□□ 1.1
MAP1LC3B-206ENST00000564844 DCAF8Q5TAQ9 597 aa21.9■■□□□ 1.1
MAP1LC3B-206ENST00000564844 BTNL9Q6UXG8 535 aa21.9■■□□□ 1.1
MAP1LC3B-206ENST00000564844 ASRGL1Q7L266 308 aa21.9■■□□□ 1.1
MAP1LC3B-206ENST00000564844 LENG9Q96B70 501 aa21.9■■□□□ 1.1
MAP1LC3B-206ENST00000564844 RUNDC3BQ96NL0 473 aa21.9■■□□□ 1.1
MAP1LC3B-206ENST00000564844 KLHL11Q9NVR0 708 aa21.9■■□□□ 1.1
MAP1LC3B-206ENST00000564844 DCTN4Q9UJW0 460 aa21.9■■□□□ 1.1
MAP1LC3B-206ENST00000564844 ANAPC5Q9UJX4 755 aa21.9■■□□□ 1.1
MAP1LC3B-206ENST00000564844 IRS2Q9Y4H2 1338 aa21.9■■□□□ 1.1
MAP1LC3B-206ENST00000564844 PHLPP1O60346 1717 aa21.9■■□□□ 1.1
MAP1LC3B-206ENST00000564844 UNC5CO95185 931 aa21.9■■□□□ 1.1
MAP1LC3B-206ENST00000564844 IRX1P78414 480 aaPredicted RBP21.9■■□□□ 1.1
MAP1LC3B-206ENST00000564844 NINJ2Q9NZG7 142 aa21.9■■□□□ 1.1
MAP1LC3B-206ENST00000564844 GJB6O95452 261 aa21.89■■□□□ 1.1
MAP1LC3B-206ENST00000564844 TTC4O95801 387 aa21.89■■□□□ 1.1
MAP1LC3B-206ENST00000564844 EEF2P13639 858 aaKnown RBP21.89■■□□□ 1.1
MAP1LC3B-206ENST00000564844 WDR4P57081 412 aaKnown RBP21.89■■□□□ 1.1
MAP1LC3B-206ENST00000564844 CBWD1Q9BRT8 395 aa21.89■■□□□ 1.1
MAP1LC3B-206ENST00000564844 ZFATQ9P243 1243 aa21.89■■□□□ 1.1
MAP1LC3B-206ENST00000564844 CFBP00751 764 aa21.89■■□□□ 1.09
MAP1LC3B-206ENST00000564844 BFSP1Q12934 665 aa21.89■■□□□ 1.09
MAP1LC3B-206ENST00000564844 BLMHQ13867 455 aa21.89■■□□□ 1.09
MAP1LC3B-206ENST00000564844 SIX1Q15475 284 aaPredicted RBP21.89■■□□□ 1.09
MAP1LC3B-206ENST00000564844 WRAP73Q9P2S5 460 aaPredicted RBP21.89■■□□□ 1.09
MAP1LC3B-206ENST00000564844 CHKBQ9Y259 395 aa21.89■■□□□ 1.09
MAP1LC3B-206ENST00000564844 MIF4GDA9UHW6 222 aaKnown RBP21.88■■□□□ 1.09
MAP1LC3B-206ENST00000564844 BCRP11274 1271 aa21.88■■□□□ 1.09
MAP1LC3B-206ENST00000564844 ATP4AP20648 1035 aa21.88■■□□□ 1.09
MAP1LC3B-206ENST00000564844 MXRA7P84157 204 aa21.88■■□□□ 1.09
MAP1LC3B-206ENST00000564844 OVGP1Q12889 678 aa21.88■■□□□ 1.09
MAP1LC3B-206ENST00000564844 SPDYCQ5MJ68 293 aa21.88■■□□□ 1.09
MAP1LC3B-206ENST00000564844 SLFN13Q68D06 897 aa21.88■■□□□ 1.09
MAP1LC3B-206ENST00000564844 SHMT1P34896 483 aa21.88■■□□□ 1.09
MAP1LC3B-206ENST00000564844 SETDB1Q15047 1291 aa21.88■■□□□ 1.09
MAP1LC3B-206ENST00000564844 ANO7Q6IWH7 933 aa21.88■■□□□ 1.09
MAP1LC3B-206ENST00000564844 GBP7Q8N8V2 638 aaPredicted RBP21.88■■□□□ 1.09
MAP1LC3B-206ENST00000564844 FAM13CQ8NE31 585 aa21.88■■□□□ 1.09
MAP1LC3B-206ENST00000564844 LRRC37BQ96QE4 947 aa21.88■■□□□ 1.09
MAP1LC3B-206ENST00000564844 SUGT1Q9Y2Z0 365 aa21.88■■□□□ 1.09
MAP1LC3B-206ENST00000564844 SMCHD1A6NHR9 2005 aa21.88■■□□□ 1.09
MAP1LC3B-206ENST00000564844 RWDD2BP57060 319 aa21.88■■□□□ 1.09
MAP1LC3B-206ENST00000564844 INHBEP58166 350 aa21.88■■□□□ 1.09
MAP1LC3B-206ENST00000564844 TNFAIP8L3Q5GJ75 292 aa21.88■■□□□ 1.09
MAP1LC3B-206ENST00000564844 DTX3LQ8TDB6 740 aa21.88■■□□□ 1.09
MAP1LC3B-206ENST00000564844 PRKAG3Q9UGI9 489 aa21.88■■□□□ 1.09
MAP1LC3B-206ENST00000564844 USTQ9Y2C2 406 aa21.88■■□□□ 1.09
MAP1LC3B-206ENST00000564844 DDX60LQ5H9U9 1706 aaKnown RBP21.88■■□□□ 1.09
MAP1LC3B-206ENST00000564844 SLITRK3O94933 977 aa21.87■■□□□ 1.09
MAP1LC3B-206ENST00000564844 KRT15P19012 456 aa21.87■■□□□ 1.09
MAP1LC3B-206ENST00000564844 YY1P25490 414 aa21.87■■□□□ 1.09
MAP1LC3B-206ENST00000564844 ZYXQ15942 572 aaKnown RBP21.87■■□□□ 1.09
MAP1LC3B-206ENST00000564844 MFSD5Q6N075 450 aa21.87■■□□□ 1.09
MAP1LC3B-206ENST00000564844 RNF217Q8TC41 542 aa21.87■■□□□ 1.09
MAP1LC3B-206ENST00000564844 C8orf37Q96NL8 207 aa21.87■■□□□ 1.09
MAP1LC3B-206ENST00000564844 SERPINB12Q96P63 405 aa21.87■■□□□ 1.09
MAP1LC3B-206ENST00000564844 TBC1D10AQ9BXI6 508 aa21.87■■□□□ 1.09
MAP1LC3B-206ENST00000564844 GTPBP10A4D1E9 387 aaKnown RBP21.87■■□□□ 1.09
MAP1LC3B-206ENST00000564844 EYA4O95677 639 aa21.87■■□□□ 1.09
MAP1LC3B-206ENST00000564844 RRM1P23921 792 aa21.87■■□□□ 1.09
MAP1LC3B-206ENST00000564844 GPATCH4Q5T3I0 446 aaKnown RBP21.87■■□□□ 1.09
MAP1LC3B-206ENST00000564844 GSTA5Q7RTV2 222 aa21.87■■□□□ 1.09
MAP1LC3B-206ENST00000564844 ZNF720Q7Z2F6 126 aa21.87■■□□□ 1.09
MAP1LC3B-206ENST00000564844 APBB1IPQ7Z5R6 666 aaPredicted RBP21.87■■□□□ 1.09
MAP1LC3B-206ENST00000564844 ANAPC7Q9UJX3 599 aa21.87■■□□□ 1.09
MAP1LC3B-206ENST00000564844 PHTF1Q9UMS5 762 aa21.87■■□□□ 1.09
MAP1LC3B-206ENST00000564844 COL22A1Q8NFW1 1626 aaPredicted RBP21.87■■□□□ 1.09
MAP1LC3B-206ENST00000564844 TMEM150BA6NC51 233 aa21.86■■□□□ 1.09
MAP1LC3B-206ENST00000564844 ATF2P15336 505 aa21.86■■□□□ 1.09
MAP1LC3B-206ENST00000564844 KAZNQ674X7 775 aa21.86■■□□□ 1.09
MAP1LC3B-206ENST00000564844 TRMT10CQ7L0Y3 403 aaKnown RBP21.86■■□□□ 1.09
MAP1LC3B-206ENST00000564844 RPS6KC1Q96S38 1066 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms