RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 SMIM10L2AP0DMW4 78 aa8.06□□□□□ -1.12
MAP1LC3B-205ENST00000564638 SMIM10L2BP0DMW5 78 aa8.06□□□□□ -1.12
MAP1LC3B-205ENST00000564638 HOXD8P13378 290 aaPredicted RBP8.06□□□□□ -1.12
MAP1LC3B-205ENST00000564638 UCHL3P15374 230 aa8.06□□□□□ -1.12
MAP1LC3B-205ENST00000564638 FERP16591 822 aa8.06□□□□□ -1.12
MAP1LC3B-205ENST00000564638 SLC9A1P19634 815 aa8.06□□□□□ -1.12
MAP1LC3B-205ENST00000564638 RFX1P22670 979 aa8.06□□□□□ -1.12
MAP1LC3B-205ENST00000564638 PON1P27169 355 aa8.06□□□□□ -1.12
MAP1LC3B-205ENST00000564638 ABCD1P33897 745 aa8.06□□□□□ -1.12
MAP1LC3B-205ENST00000564638 MAGEA1P43355 309 aa8.06□□□□□ -1.12
MAP1LC3B-205ENST00000564638 FMO5P49326 533 aa8.06□□□□□ -1.12
MAP1LC3B-205ENST00000564638 CDK7P50613 346 aa8.06□□□□□ -1.12
MAP1LC3B-205ENST00000564638 STAT5BP51692 787 aa8.06□□□□□ -1.12
MAP1LC3B-205ENST00000564638 PEX3P56589 373 aa8.06□□□□□ -1.12
MAP1LC3B-205ENST00000564638 IGBP1P78318 339 aa8.06□□□□□ -1.12
MAP1LC3B-205ENST00000564638 GTF2BQ00403 316 aa8.06□□□□□ -1.12
MAP1LC3B-205ENST00000564638 BFSP1Q12934 665 aa8.06□□□□□ -1.12
MAP1LC3B-205ENST00000564638 KLHDC7AQ5VTJ3 777 aa8.06□□□□□ -1.12
MAP1LC3B-205ENST00000564638 HGSNATQ68CP4 663 aa8.06□□□□□ -1.12
MAP1LC3B-205ENST00000564638 SWSAP1Q6NVH7 229 aa8.06□□□□□ -1.12
MAP1LC3B-205ENST00000564638 NFRKBQ6P4R8 1299 aa8.06□□□□□ -1.12
MAP1LC3B-205ENST00000564638 INTS8Q75QN2 995 aaKnown RBP8.06□□□□□ -1.12
MAP1LC3B-205ENST00000564638 SRGAP1Q7Z6B7 1085 aa8.06□□□□□ -1.12
MAP1LC3B-205ENST00000564638 KSR1Q8IVT5 923 aa8.06□□□□□ -1.12
MAP1LC3B-205ENST00000564638 CCDC60Q8IWA6 550 aaPredicted RBP8.06□□□□□ -1.12
MAP1LC3B-205ENST00000564638 FAM126BQ8IXS8 530 aa8.06□□□□□ -1.12
MAP1LC3B-205ENST00000564638 SLC43A3Q8NBI5 491 aa8.06□□□□□ -1.12
MAP1LC3B-205ENST00000564638 LRRN4CLQ8ND94 238 aa8.06□□□□□ -1.12
MAP1LC3B-205ENST00000564638 TRIM58Q8NG06 486 aa8.06□□□□□ -1.12
MAP1LC3B-205ENST00000564638 SPIRE2Q8WWL2 714 aa8.06□□□□□ -1.12
MAP1LC3B-205ENST00000564638 RABGGTAQ92696 567 aa8.06□□□□□ -1.12
MAP1LC3B-205ENST00000564638 BORCS6Q96GS4 357 aa8.06□□□□□ -1.12
MAP1LC3B-205ENST00000564638 CEP170P1Q96L14 293 aa8.06□□□□□ -1.12
MAP1LC3B-205ENST00000564638 PCYT2Q99447 389 aa8.06□□□□□ -1.12
MAP1LC3B-205ENST00000564638 PPP1R12CQ9BZL4 782 aa8.06□□□□□ -1.12
MAP1LC3B-205ENST00000564638 TRPV6Q9H1D0 765 aa8.06□□□□□ -1.12
MAP1LC3B-205ENST00000564638 SMARCAD1Q9H4L7 1026 aa8.06□□□□□ -1.12
MAP1LC3B-205ENST00000564638 ZNF302Q9NR11 478 aa8.06□□□□□ -1.12
MAP1LC3B-205ENST00000564638 PDLIM7Q9NR12 457 aa8.06□□□□□ -1.12
MAP1LC3B-205ENST00000564638 TRMT13Q9NUP7 481 aaKnown RBP8.06□□□□□ -1.12
MAP1LC3B-205ENST00000564638 TMEM39AQ9NV64 488 aa8.06□□□□□ -1.12
MAP1LC3B-205ENST00000564638 AIPL1Q9NZN9 384 aa8.06□□□□□ -1.12
MAP1LC3B-205ENST00000564638 TRIM10Q9UDY6 481 aa8.06□□□□□ -1.12
MAP1LC3B-205ENST00000564638 SEPT9Q9UHD8 586 aaPredicted RBP8.06□□□□□ -1.12
MAP1LC3B-205ENST00000564638 KCNG1Q9UIX4 513 aa8.06□□□□□ -1.12
MAP1LC3B-205ENST00000564638 TRPC6Q9Y210 931 aa8.06□□□□□ -1.12
MAP1LC3B-205ENST00000564638 FHOD1Q9Y613 1164 aa8.06□□□□□ -1.12
MAP1LC3B-205ENST00000564638 EVPLQ92817 2033 aa8.06□□□□□ -1.12
MAP1LC3B-205ENST00000564638 ATP8B3O60423 1300 aa8.05□□□□□ -1.12
MAP1LC3B-205ENST00000564638 EMSYQ7Z589 1322 aa8.05□□□□□ -1.12
MAP1LC3B-205ENST00000564638 C17orf102A2RUQ5 167 aa8.05□□□□□ -1.12
MAP1LC3B-205ENST00000564638 CTAGE15A4D2H0 777 aa8.05□□□□□ -1.12
MAP1LC3B-205ENST00000564638 TMEM150BA6NC51 233 aa8.05□□□□□ -1.12
MAP1LC3B-205ENST00000564638 CCDC169A6NNP5 214 aa8.05□□□□□ -1.12
MAP1LC3B-205ENST00000564638 HAS3O00219 553 aa8.05□□□□□ -1.12
MAP1LC3B-205ENST00000564638 ZNF263O14978 683 aa8.05□□□□□ -1.12
MAP1LC3B-205ENST00000564638 SLC16A4O15374 487 aa8.05□□□□□ -1.12
MAP1LC3B-205ENST00000564638 P4HA2O15460 535 aa8.05□□□□□ -1.12
MAP1LC3B-205ENST00000564638 LGR5O75473 907 aa8.05□□□□□ -1.12
MAP1LC3B-205ENST00000564638 ABL1P00519 1130 aa8.05□□□□□ -1.12
MAP1LC3B-205ENST00000564638 CCDC172P0C7W6 258 aa8.05□□□□□ -1.12
MAP1LC3B-205ENST00000564638 CTAGE8P0CG41 777 aa8.05□□□□□ -1.12
MAP1LC3B-205ENST00000564638 TRIM49P0CI25 452 aa8.05□□□□□ -1.12
MAP1LC3B-205ENST00000564638 TRIM49CP0CI26 452 aa8.05□□□□□ -1.12
MAP1LC3B-205ENST00000564638 CYP2C9P11712 490 aa8.05□□□□□ -1.12
MAP1LC3B-205ENST00000564638 ACTN1P12814 892 aa8.05□□□□□ -1.12
MAP1LC3B-205ENST00000564638 RAG1P15918 1043 aa8.05□□□□□ -1.12
MAP1LC3B-205ENST00000564638 STAT1P42224 750 aa8.05□□□□□ -1.12
MAP1LC3B-205ENST00000564638 VAMP7P51809 220 aa8.05□□□□□ -1.12
MAP1LC3B-205ENST00000564638 NPEPPSP55786 919 aa8.05□□□□□ -1.12
MAP1LC3B-205ENST00000564638 ZNF200P98182 395 aaPredicted RBP8.05□□□□□ -1.12
MAP1LC3B-205ENST00000564638 AMPD2Q01433 879 aa8.05□□□□□ -1.12
MAP1LC3B-205ENST00000564638 FAAP100Q0VG06 881 aa8.05□□□□□ -1.12
MAP1LC3B-205ENST00000564638 CETN1Q12798 172 aa8.05□□□□□ -1.12
MAP1LC3B-205ENST00000564638 PPFIA1Q13136 1202 aa8.05□□□□□ -1.12
MAP1LC3B-205ENST00000564638 SLC18A3Q16572 532 aa8.05□□□□□ -1.12
MAP1LC3B-205ENST00000564638 PTGISQ16647 500 aa8.05□□□□□ -1.12
MAP1LC3B-205ENST00000564638 ASTE1Q2TB18 679 aaPredicted RBP8.05□□□□□ -1.12
MAP1LC3B-205ENST00000564638 XKR3Q5GH77 459 aa8.05□□□□□ -1.12
MAP1LC3B-205ENST00000564638 C10orf76Q5T2E6 689 aa8.05□□□□□ -1.12
MAP1LC3B-205ENST00000564638 C1orf53Q5VUE5 145 aa8.05□□□□□ -1.12
MAP1LC3B-205ENST00000564638 GDF6Q6KF10 455 aaPredicted RBP8.05□□□□□ -1.12
MAP1LC3B-205ENST00000564638 ABHD15Q6UXT9 468 aa8.05□□□□□ -1.12
MAP1LC3B-205ENST00000564638 ANO5Q75V66 913 aa8.05□□□□□ -1.12
MAP1LC3B-205ENST00000564638 RSRC2Q7L4I2 434 aaKnown RBP8.05□□□□□ -1.12
MAP1LC3B-205ENST00000564638 TRAPPC11Q7Z392 1133 aa8.05□□□□□ -1.12
MAP1LC3B-205ENST00000564638 ANKRD33Q7Z3H0 272 aa8.05□□□□□ -1.12
MAP1LC3B-205ENST00000564638 CTAGE6Q86UF2 777 aa8.05□□□□□ -1.12
MAP1LC3B-205ENST00000564638 GPIHBP1Q8IV16 184 aa8.05□□□□□ -1.12
MAP1LC3B-205ENST00000564638 CTAGE4Q8IX94 777 aa8.05□□□□□ -1.12
MAP1LC3B-205ENST00000564638 GPR161Q8N6U8 529 aaKnown RBP8.05□□□□□ -1.12
MAP1LC3B-205ENST00000564638 XXYLT1Q8NBI6 393 aa8.05□□□□□ -1.12
MAP1LC3B-205ENST00000564638 TMEM174Q8WUU8 243 aa8.05□□□□□ -1.12
MAP1LC3B-205ENST00000564638 IFT74Q96LB3 600 aa8.05□□□□□ -1.12
MAP1LC3B-205ENST00000564638 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.05□□□□□ -1.12
MAP1LC3B-205ENST00000564638 SEZ6LQ9BYH1 1024 aa8.05□□□□□ -1.12
MAP1LC3B-205ENST00000564638 LACRTQ9GZZ8 138 aa8.05□□□□□ -1.12
MAP1LC3B-205ENST00000564638 INTS2Q9H0H0 1204 aaKnown RBP8.05□□□□□ -1.12
MAP1LC3B-205ENST00000564638 POLR3FQ9H1D9 316 aaPredicted RBP8.05□□□□□ -1.12
MAP1LC3B-205ENST00000564638 RNPEPQ9H4A4 650 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms