RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 PRPF4BQ13523 1007 aaKnown RBP26.37■■□□□ 1.81
NME3-206ENST00000564252 HSP90AA2PQ14568 343 aaPredicted RBP26.37■■□□□ 1.81
NME3-206ENST00000564252 NBR1Q14596 966 aa26.37■■□□□ 1.81
NME3-206ENST00000564252 MAPK6Q16659 721 aa26.37■■□□□ 1.81
NME3-206ENST00000564252 HAUS3Q68CZ6 603 aa26.37■■□□□ 1.81
NME3-206ENST00000564252 CYP26C1Q6V0L0 522 aa26.37■■□□□ 1.81
NME3-206ENST00000564252 SH2B1Q9NRF2 756 aaPredicted RBP26.37■■□□□ 1.81
NME3-206ENST00000564252 SNTG2Q9NY99 539 aa26.37■■□□□ 1.81
NME3-206ENST00000564252 FNIP2Q9P278 1114 aa26.37■■□□□ 1.81
NME3-206ENST00000564252 USP20Q9Y2K6 914 aa26.37■■□□□ 1.81
NME3-206ENST00000564252 MTCL1Q9Y4B5 1905 aaKnown RBP26.36■■□□□ 1.81
NME3-206ENST00000564252 TGM5O43548 720 aa26.36■■□□□ 1.81
NME3-206ENST00000564252 SPATA31D3P0C874 917 aa26.36■■□□□ 1.81
NME3-206ENST00000564252 NUBP1P53384 320 aa26.36■■□□□ 1.81
NME3-206ENST00000564252 TUSC3Q13454 348 aa26.36■■□□□ 1.81
NME3-206ENST00000564252 GNL2Q13823 731 aaKnown RBP26.36■■□□□ 1.81
NME3-206ENST00000564252 SPATA31D4Q6ZUB0 917 aa26.36■■□□□ 1.81
NME3-206ENST00000564252 PALB2Q86YC2 1186 aa26.36■■□□□ 1.81
NME3-206ENST00000564252 FAM184AQ8NB25 1140 aa26.36■■□□□ 1.81
NME3-206ENST00000564252 RIN2Q8WYP3 895 aaPredicted RBP26.36■■□□□ 1.81
NME3-206ENST00000564252 ZNF707Q96C28 371 aaPredicted RBP26.36■■□□□ 1.81
NME3-206ENST00000564252 CXCL16Q9H2A7 254 aa26.36■■□□□ 1.81
NME3-206ENST00000564252 WDR6Q9NNW5 1121 aaKnown RBP26.36■■□□□ 1.81
NME3-206ENST00000564252 TADA2AO75478 443 aa26.35■■□□□ 1.81
NME3-206ENST00000564252 RECQL4O94761 1208 aa26.35■■□□□ 1.81
NME3-206ENST00000564252 CCT6AP40227 531 aaKnown RBP26.35■■□□□ 1.81
NME3-206ENST00000564252 PPP2R5AQ15172 486 aa26.35■■□□□ 1.81
NME3-206ENST00000564252 NAB2Q15742 525 aa26.35■■□□□ 1.81
NME3-206ENST00000564252 TMEM132AQ24JP5 1023 aa26.35■■□□□ 1.81
NME3-206ENST00000564252 EEF1DP3Q658K8 133 aa26.35■■□□□ 1.81
NME3-206ENST00000564252 LILRA6Q6PI73 481 aa26.35■■□□□ 1.81
NME3-206ENST00000564252 TMEM105Q8N8V8 129 aa26.35■■□□□ 1.81
NME3-206ENST00000564252 DEPTORQ8TB45 409 aa26.35■■□□□ 1.81
NME3-206ENST00000564252 PLEKHA4Q9H4M7 779 aa26.35■■□□□ 1.81
NME3-206ENST00000564252 KCNK12Q9HB15 430 aa26.35■■□□□ 1.81
NME3-206ENST00000564252 POLD4Q9HCU8 107 aa26.35■■□□□ 1.81
NME3-206ENST00000564252 NOL7Q9UMY1 257 aaKnown RBP26.35■■□□□ 1.81
NME3-206ENST00000564252 CLUHO75153 1309 aa26.35■■□□□ 1.81
NME3-206ENST00000564252 DMDP11532 3685 aa26.35■■□□□ 1.81
NME3-206ENST00000564252 CASTOR2A6NHX0 329 aa26.34■■□□□ 1.81
NME3-206ENST00000564252 RPL17P18621 184 aaKnown RBP26.34■■□□□ 1.81
NME3-206ENST00000564252 LIG1P18858 919 aa26.34■■□□□ 1.81
NME3-206ENST00000564252 U2AF2P26368 475 aaKnown RBP eCLIP26.34■■□□□ 1.81
NME3-206ENST00000564252 CREMQ03060 361 aa26.34■■□□□ 1.81
NME3-206ENST00000564252 TDGQ13569 410 aa26.34■■□□□ 1.81
NME3-206ENST00000564252 RTP2Q5QGT7 225 aa26.34■■□□□ 1.81
NME3-206ENST00000564252 GLYCTKQ8IVS8 523 aa26.34■■□□□ 1.81
NME3-206ENST00000564252 SMG7Q92540 1137 aaKnown RBP26.34■■□□□ 1.81
NME3-206ENST00000564252 ADPGKQ9BRR6 497 aa26.34■■□□□ 1.81
NME3-206ENST00000564252 KIFC3Q9BVG8 833 aa26.34■■□□□ 1.81
NME3-206ENST00000564252 BHMT2Q9H2M3 363 aa26.34■■□□□ 1.81
NME3-206ENST00000564252 FAM86C1Q9NVL1 165 aa26.34■■□□□ 1.81
NME3-206ENST00000564252 LRWD1Q9UFC0 647 aa26.34■■□□□ 1.81
NME3-206ENST00000564252 SF3B1O75533 1304 aaKnown RBP eCLIP26.34■■□□□ 1.81
NME3-206ENST00000564252 GALR2O43603 387 aaPredicted RBP26.33■■□□□ 1.81
NME3-206ENST00000564252 KIF4AO95239 1232 aa26.33■■□□□ 1.81
NME3-206ENST00000564252 THP07101 528 aa26.33■■□□□ 1.81
NME3-206ENST00000564252 TOB1P50616 345 aaPredicted RBP26.33■■□□□ 1.81
NME3-206ENST00000564252 PRSS55Q6UWB4 352 aaPredicted RBP26.33■■□□□ 1.81
NME3-206ENST00000564252 IGSF22Q8N9C0 903 aa26.33■■□□□ 1.81
NME3-206ENST00000564252 HASPINQ8TF76 798 aa26.33■■□□□ 1.81
NME3-206ENST00000564252 NT5C3AQ9H0P0 336 aa26.33■■□□□ 1.81
NME3-206ENST00000564252 DUSP12Q9UNI6 340 aa26.33■■□□□ 1.81
NME3-206ENST00000564252 KIAA1024Q9UPX6 916 aa26.33■■□□□ 1.81
NME3-206ENST00000564252 EFNA5P52803 228 aa26.32■■□□□ 1.8
NME3-206ENST00000564252 PDIA5Q14554 519 aa26.32■■□□□ 1.8
NME3-206ENST00000564252 ASTLQ6HA08 431 aaPredicted RBP26.32■■□□□ 1.8
NME3-206ENST00000564252 STAMQ92783 540 aa26.32■■□□□ 1.8
NME3-206ENST00000564252 KIFAP3Q92845 792 aa26.32■■□□□ 1.8
NME3-206ENST00000564252 IFT74Q96LB3 600 aa26.32■■□□□ 1.8
NME3-206ENST00000564252 IRF2BPLQ9H1B7 796 aa26.32■■□□□ 1.8
NME3-206ENST00000564252 ZDHHC7Q9NXF8 308 aa26.32■■□□□ 1.8
NME3-206ENST00000564252 IGSF9Q9P2J2 1179 aa26.32■■□□□ 1.8
NME3-206ENST00000564252 DOCK8Q8NF50 2099 aa26.31■■□□□ 1.8
NME3-206ENST00000564252 GBP2P32456 591 aaPredicted RBP26.31■■□□□ 1.8
NME3-206ENST00000564252 PTGDRQ13258 359 aa26.31■■□□□ 1.8
NME3-206ENST00000564252 DCAF4L1Q3SXM0 396 aa26.31■■□□□ 1.8
NME3-206ENST00000564252 NT5DC1Q5TFE4 455 aa26.31■■□□□ 1.8
NME3-206ENST00000564252 MYADMQ96S97 322 aa26.31■■□□□ 1.8
NME3-206ENST00000564252 TTPALQ9BTX7 342 aa26.31■■□□□ 1.8
NME3-206ENST00000564252 MFSD1Q9H3U5 465 aa26.31■■□□□ 1.8
NME3-206ENST00000564252 DDX19AQ9NUU7 478 aaKnown RBP26.31■■□□□ 1.8
NME3-206ENST00000564252 EPS15L1Q9UBC2 864 aa26.31■■□□□ 1.8
NME3-206ENST00000564252 GDAQ9Y2T3 454 aa26.31■■□□□ 1.8
NME3-206ENST00000564252 PCDHB6Q9Y5E3 794 aa26.31■■□□□ 1.8
NME3-206ENST00000564252 H0Y858 1186 aa26.3■■□□□ 1.8
NME3-206ENST00000564252 CLCN5P51795 746 aa26.3■■□□□ 1.8
NME3-206ENST00000564252 C8orf34Q49A92 452 aa26.3■■□□□ 1.8
NME3-206ENST00000564252 FAM171A1Q5VUB5 890 aa26.3■■□□□ 1.8
NME3-206ENST00000564252 SNX29Q8TEQ0 813 aa26.3■■□□□ 1.8
NME3-206ENST00000564252 PIK3R5Q8WYR1 880 aa26.3■■□□□ 1.8
NME3-206ENST00000564252 ATOH1Q92858 354 aaPredicted RBP26.3■■□□□ 1.8
NME3-206ENST00000564252 PRKD2Q9BZL6 878 aa26.3■■□□□ 1.8
NME3-206ENST00000564252 ATF7IP2Q5U623 682 aa26.29■■□□□ 1.8
NME3-206ENST00000564252 CWF19L1Q69YN2 538 aaKnown RBP26.29■■□□□ 1.8
NME3-206ENST00000564252 LNX1Q8TBB1 728 aaPredicted RBP26.29■■□□□ 1.8
NME3-206ENST00000564252 RSAD2Q8WXG1 361 aa26.29■■□□□ 1.8
NME3-206ENST00000564252 CLSTN3Q9BQT9 956 aa26.29■■□□□ 1.8
NME3-206ENST00000564252 PIDD1Q9HB75 910 aa26.29■■□□□ 1.8
NME3-206ENST00000564252 DAXXQ9UER7 740 aaPredicted RBP26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms