RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 DLG4P78352 724 aa19.15■□□□□ 0.66
GDE1-203ENST00000564172 MFSD10Q14728 455 aa19.15■□□□□ 0.66
GDE1-203ENST00000564172 MAPK6Q16659 721 aa19.15■□□□□ 0.66
GDE1-203ENST00000564172 EXOC3L4Q17RC7 722 aa19.15■□□□□ 0.66
GDE1-203ENST00000564172 SLFN12LQ6IEE8 588 aa19.15■□□□□ 0.66
GDE1-203ENST00000564172 GPD1LQ8N335 351 aa19.15■□□□□ 0.66
GDE1-203ENST00000564172 LMBR1Q8WVP7 490 aa19.15■□□□□ 0.66
GDE1-203ENST00000564172 ZBTB45Q96K62 511 aaPredicted RBP19.15■□□□□ 0.66
GDE1-203ENST00000564172 LSM14BQ9BX40 385 aaKnown RBP19.15■□□□□ 0.66
GDE1-203ENST00000564172 FUT8Q9BYC5 575 aa19.15■□□□□ 0.66
GDE1-203ENST00000564172 ARFGAP3Q9NP61 516 aa19.15■□□□□ 0.66
GDE1-203ENST00000564172 NRCAMQ92823 1304 aa19.14■□□□□ 0.66
GDE1-203ENST00000564172 TTLL13PA6NNM8 815 aa19.14■□□□□ 0.65
GDE1-203ENST00000564172 C6orf222P0C671 652 aaPredicted RBP19.14■□□□□ 0.65
GDE1-203ENST00000564172 SLC9A1P19634 815 aa19.14■□□□□ 0.65
GDE1-203ENST00000564172 PSEN2P49810 448 aa19.14■□□□□ 0.65
GDE1-203ENST00000564172 GJA9P57773 515 aa19.14■□□□□ 0.65
GDE1-203ENST00000564172 POU5F1BQ06416 359 aa19.14■□□□□ 0.65
GDE1-203ENST00000564172 ZPBP2Q6X784 338 aa19.14■□□□□ 0.65
GDE1-203ENST00000564172 PLEKHO2Q8TD55 490 aa19.14■□□□□ 0.65
GDE1-203ENST00000564172 NFKBIZQ9BYH8 718 aa19.14■□□□□ 0.65
GDE1-203ENST00000564172 EDEM3Q9BZQ6 932 aa19.14■□□□□ 0.65
GDE1-203ENST00000564172 HAPLN2Q9GZV7 340 aa19.14■□□□□ 0.65
GDE1-203ENST00000564172 IFT122Q9HBG6 1241 aa19.14■□□□□ 0.65
GDE1-203ENST00000564172 AKT3Q9Y243 479 aa19.14■□□□□ 0.65
GDE1-203ENST00000564172 MYADML2A6NDP7 307 aa19.13■□□□□ 0.65
GDE1-203ENST00000564172 COQ9O75208 318 aa19.13■□□□□ 0.65
GDE1-203ENST00000564172 PRKCBP05771 671 aa19.13■□□□□ 0.65
GDE1-203ENST00000564172 PON1P27169 355 aa19.13■□□□□ 0.65
GDE1-203ENST00000564172 PURAQ00577 322 aaKnown RBP19.13■□□□□ 0.65
GDE1-203ENST00000564172 CBWD6Q4V339 395 aa19.13■□□□□ 0.65
GDE1-203ENST00000564172 CBWD3Q5JTY5 395 aa19.13■□□□□ 0.65
GDE1-203ENST00000564172 CBWD5Q5RIA9 395 aa19.13■□□□□ 0.65
GDE1-203ENST00000564172 E4F1Q66K89 784 aaPredicted RBP19.13■□□□□ 0.65
GDE1-203ENST00000564172 GPR161Q8N6U8 529 aaKnown RBP19.13■□□□□ 0.65
GDE1-203ENST00000564172 PPP1R13LQ8WUF5 828 aa19.13■□□□□ 0.65
GDE1-203ENST00000564172 MRPL4Q9BYD3 311 aaKnown RBP19.13■□□□□ 0.65
GDE1-203ENST00000564172 FZD8Q9H461 694 aa19.13■□□□□ 0.65
GDE1-203ENST00000564172 KIAA0391O15091 583 aaKnown RBP19.13■□□□□ 0.65
GDE1-203ENST00000564172 VTNP04004 478 aa19.13■□□□□ 0.65
GDE1-203ENST00000564172 APBA1Q02410 837 aa19.13■□□□□ 0.65
GDE1-203ENST00000564172 GRIK3Q13003 919 aa19.13■□□□□ 0.65
GDE1-203ENST00000564172 TSR1Q2NL82 804 aaKnown RBP19.13■□□□□ 0.65
GDE1-203ENST00000564172 C1orf220Q5T0J3 134 aa19.13■□□□□ 0.65
GDE1-203ENST00000564172 DPY19L2P1Q6NXN4 242 aa19.13■□□□□ 0.65
GDE1-203ENST00000564172 NFRKBQ6P4R8 1299 aa19.13■□□□□ 0.65
GDE1-203ENST00000564172 KIAA0319LQ8IZA0 1049 aa19.13■□□□□ 0.65
GDE1-203ENST00000564172 MFSD14AQ96MC6 490 aa19.13■□□□□ 0.65
GDE1-203ENST00000564172 SH3GL3Q99963 347 aa19.13■□□□□ 0.65
GDE1-203ENST00000564172 MINDY3Q9H8M7 445 aa19.13■□□□□ 0.65
GDE1-203ENST00000564172 AGO2Q9UKV8 859 aaKnown RBP19.13■□□□□ 0.65
GDE1-203ENST00000564172 SOWAHDA6NJG2 315 aa19.12■□□□□ 0.65
GDE1-203ENST00000564172 INO80B-WBP1J3KQ70 363 aa19.12■□□□□ 0.65
GDE1-203ENST00000564172 MAP2K7O14733 419 aa19.12■□□□□ 0.65
GDE1-203ENST00000564172 EXTL3O43909 919 aa19.12■□□□□ 0.65
GDE1-203ENST00000564172 MTA1Q13330 715 aa19.12■□□□□ 0.65
GDE1-203ENST00000564172 GNASQ5JWF2 1037 aa19.12■□□□□ 0.65
GDE1-203ENST00000564172 AP1ARQ63HQ0 302 aa19.12■□□□□ 0.65
GDE1-203ENST00000564172 NAIF1Q69YI7 327 aaPredicted RBP19.12■□□□□ 0.65
GDE1-203ENST00000564172 WDR59Q6PJI9 974 aa19.12■□□□□ 0.65
GDE1-203ENST00000564172 TMTC1Q8IUR5 882 aa19.12■□□□□ 0.65
GDE1-203ENST00000564172 PARD3BQ8TEW8 1205 aa19.12■□□□□ 0.65
GDE1-203ENST00000564172 BAP1Q92560 729 aa19.12■□□□□ 0.65
GDE1-203ENST00000564172 FAM213AQ9BRX8 229 aa19.12■□□□□ 0.65
GDE1-203ENST00000564172 KATNAL1Q9BW62 490 aa19.12■□□□□ 0.65
GDE1-203ENST00000564172 INO80BQ9C086 356 aaPredicted RBP19.12■□□□□ 0.65
GDE1-203ENST00000564172 KIAA1586Q9HCI6 787 aa19.12■□□□□ 0.65
GDE1-203ENST00000564172 PLCB1Q9NQ66 1216 aa19.12■□□□□ 0.65
GDE1-203ENST00000564172 CEP72Q9P209 647 aa19.12■□□□□ 0.65
GDE1-203ENST00000564172 MCM8Q9UJA3 840 aa19.12■□□□□ 0.65
GDE1-203ENST00000564172 SIP14410 1827 aa19.12■□□□□ 0.65
GDE1-203ENST00000564172 CASP8AP2Q9UKL3 1982 aa19.12■□□□□ 0.65
GDE1-203ENST00000564172 A0A087WZ62 844 aa19.12■□□□□ 0.65
GDE1-203ENST00000564172 A0A0B4J269 797 aa19.12■□□□□ 0.65
GDE1-203ENST00000564172 ACKR2O00590 384 aa19.12■□□□□ 0.65
GDE1-203ENST00000564172 TADA3O75528 432 aa19.12■□□□□ 0.65
GDE1-203ENST00000564172 NEBLO76041 1014 aa19.12■□□□□ 0.65
GDE1-203ENST00000564172 PGK1P00558 417 aa19.12■□□□□ 0.65
GDE1-203ENST00000564172 RARBP10826 455 aa19.12■□□□□ 0.65
GDE1-203ENST00000564172 ACTN1P12814 892 aa19.12■□□□□ 0.65
GDE1-203ENST00000564172 PRKAR2AP13861 404 aaKnown RBP19.12■□□□□ 0.65
GDE1-203ENST00000564172 MBTD1Q05BQ5 628 aa19.12■□□□□ 0.65
GDE1-203ENST00000564172 PPP3CAQ08209 521 aa19.12■□□□□ 0.65
GDE1-203ENST00000564172 CACNA2D4Q7Z3S7 1137 aa19.12■□□□□ 0.65
GDE1-203ENST00000564172 IFNLR1Q8IU57 520 aaPredicted RBP19.12■□□□□ 0.65
GDE1-203ENST00000564172 ACO2Q99798 780 aaKnown RBP19.12■□□□□ 0.65
GDE1-203ENST00000564172 FDXACB1Q9BRP7 624 aaPredicted RBP19.12■□□□□ 0.65
GDE1-203ENST00000564172 UPF3AQ9H1J1 476 aaKnown RBP19.12■□□□□ 0.65
GDE1-203ENST00000564172 GCNT4Q9P109 453 aa19.12■□□□□ 0.65
GDE1-203ENST00000564172 ANKFY1Q9P2R3 1169 aa19.12■□□□□ 0.65
GDE1-203ENST00000564172 KAT6AQ92794 2004 aa19.11■□□□□ 0.65
GDE1-203ENST00000564172 MBLAC1A4D2B0 266 aaPredicted RBP19.11■□□□□ 0.65
GDE1-203ENST00000564172 ZNF233A6NK53 670 aa19.11■□□□□ 0.65
GDE1-203ENST00000564172 CLDN3O15551 220 aa19.11■□□□□ 0.65
GDE1-203ENST00000564172 TOM1L1O75674 476 aa19.11■□□□□ 0.65
GDE1-203ENST00000564172 CCND3P30281 292 aaPredicted RBP19.11■□□□□ 0.65
GDE1-203ENST00000564172 PHKA2P46019 1235 aa19.11■□□□□ 0.65
GDE1-203ENST00000564172 POLR2FP61218 127 aaKnown RBP19.11■□□□□ 0.65
GDE1-203ENST00000564172 ADAM17P78536 824 aa19.11■□□□□ 0.65
GDE1-203ENST00000564172 CYP24A1Q07973 514 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms