RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 CD300LGQ6UXG3 332 aa11.59□□□□□ -0.55
SF3B3-204ENST00000563739 RSPO2Q6UXX9 243 aaPredicted RBP11.59□□□□□ -0.55
SF3B3-204ENST00000563739 FERMT3Q86UX7 667 aa11.59□□□□□ -0.55
SF3B3-204ENST00000563739 CDR2LQ86X02 465 aaPredicted RBP11.59□□□□□ -0.55
SF3B3-204ENST00000563739 LNX1Q8TBB1 728 aaPredicted RBP11.59□□□□□ -0.55
SF3B3-204ENST00000563739 ASAP3Q8TDY4 903 aa11.59□□□□□ -0.55
SF3B3-204ENST00000563739 KCNB2Q92953 911 aa11.59□□□□□ -0.55
SF3B3-204ENST00000563739 ZSCAN32Q9NX65 697 aa11.59□□□□□ -0.55
SF3B3-204ENST00000563739 KANSL3Q9P2N6 904 aa11.59□□□□□ -0.55
SF3B3-204ENST00000563739 TCEAL9Q9UHQ7 104 aa11.59□□□□□ -0.55
SF3B3-204ENST00000563739 ADAM28Q9UKQ2 775 aa11.59□□□□□ -0.55
SF3B3-204ENST00000563739 GTF3C3Q9Y5Q9 886 aa11.59□□□□□ -0.55
SF3B3-204ENST00000563739 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.59□□□□□ -0.55
SF3B3-204ENST00000563739 IGF2RP11717 2491 aa11.58□□□□□ -0.56
SF3B3-204ENST00000563739 TTLL13PA6NNM8 815 aa11.58□□□□□ -0.56
SF3B3-204ENST00000563739 PTGESO14684 152 aa11.58□□□□□ -0.56
SF3B3-204ENST00000563739 LAMTOR5O43504 91 aa11.58□□□□□ -0.56
SF3B3-204ENST00000563739 KIF4AO95239 1232 aa11.58□□□□□ -0.56
SF3B3-204ENST00000563739 EDN1P05305 212 aa11.58□□□□□ -0.56
SF3B3-204ENST00000563739 POU2F2P09086 479 aa11.58□□□□□ -0.56
SF3B3-204ENST00000563739 SRGAP2CP0DJJ0 459 aa11.58□□□□□ -0.56
SF3B3-204ENST00000563739 ARF4P18085 180 aaPredicted RBP11.58□□□□□ -0.56
SF3B3-204ENST00000563739 PTENP60484 403 aa11.58□□□□□ -0.56
SF3B3-204ENST00000563739 PSMC5P62195 406 aa11.58□□□□□ -0.56
SF3B3-204ENST00000563739 MTAPQ13126 283 aa11.58□□□□□ -0.56
SF3B3-204ENST00000563739 CAPSQ13938 189 aa11.58□□□□□ -0.56
SF3B3-204ENST00000563739 GAS6Q14393 721 aa11.58□□□□□ -0.56
SF3B3-204ENST00000563739 ACAP1Q15027 740 aa11.58□□□□□ -0.56
SF3B3-204ENST00000563739 SYNE3Q6ZMZ3 975 aa11.58□□□□□ -0.56
SF3B3-204ENST00000563739 PIK3R5Q8WYR1 880 aa11.58□□□□□ -0.56
SF3B3-204ENST00000563739 AIFM3Q96NN9 605 aa11.58□□□□□ -0.56
SF3B3-204ENST00000563739 FAM193BQ96PV7 902 aaPredicted RBP11.58□□□□□ -0.56
SF3B3-204ENST00000563739 RTKNQ9BST9 563 aa11.58□□□□□ -0.56
SF3B3-204ENST00000563739 CSRNP2Q9H175 543 aa11.58□□□□□ -0.56
SF3B3-204ENST00000563739 NCOA5Q9HCD5 579 aaKnown RBP11.58□□□□□ -0.56
SF3B3-204ENST00000563739 KCNMB3Q9NPA1 279 aa11.58□□□□□ -0.56
SF3B3-204ENST00000563739 DNMT3BQ9UBC3 853 aaKnown RBP11.58□□□□□ -0.56
SF3B3-204ENST00000563739 ZFP37Q9Y6Q3 630 aaPredicted RBP11.58□□□□□ -0.56
SF3B3-204ENST00000563739 ZMYM2Q9UBW7 1377 aa11.57□□□□□ -0.56
SF3B3-204ENST00000563739 AKAP13Q12802 2813 aa11.57□□□□□ -0.56
SF3B3-204ENST00000563739 SLC30A4O14863 429 aa11.57□□□□□ -0.56
SF3B3-204ENST00000563739 CCL16O15467 120 aa11.57□□□□□ -0.56
SF3B3-204ENST00000563739 C8AP07357 584 aa11.57□□□□□ -0.56
SF3B3-204ENST00000563739 IFNAR1P17181 557 aa11.57□□□□□ -0.56
SF3B3-204ENST00000563739 AKAP5P24588 427 aa11.57□□□□□ -0.56
SF3B3-204ENST00000563739 GNA11P29992 359 aa11.57□□□□□ -0.56
SF3B3-204ENST00000563739 HOXA9P31269 272 aa11.57□□□□□ -0.56
SF3B3-204ENST00000563739 RPS9P46781 194 aaKnown RBP11.57□□□□□ -0.56
SF3B3-204ENST00000563739 DNM2P50570 870 aa11.57□□□□□ -0.56
SF3B3-204ENST00000563739 LMNB2Q03252 620 aa11.57□□□□□ -0.56
SF3B3-204ENST00000563739 DMWDQ09019 674 aa11.57□□□□□ -0.56
SF3B3-204ENST00000563739 PPP2R5CQ13362 524 aa11.57□□□□□ -0.56
SF3B3-204ENST00000563739 EMC2Q15006 297 aa11.57□□□□□ -0.56
SF3B3-204ENST00000563739 USP41Q3LFD5 358 aa11.57□□□□□ -0.56
SF3B3-204ENST00000563739 TPRG1Q6ZUI0 275 aa11.57□□□□□ -0.56
SF3B3-204ENST00000563739 RNF149Q8NC42 400 aa11.57□□□□□ -0.56
SF3B3-204ENST00000563739 HASPINQ8TF76 798 aa11.57□□□□□ -0.56
SF3B3-204ENST00000563739 PSPC1Q8WXF1 523 aaKnown RBP11.57□□□□□ -0.56
SF3B3-204ENST00000563739 ING5Q8WYH8 240 aa11.57□□□□□ -0.56
SF3B3-204ENST00000563739 HAS1Q92839 578 aa11.57□□□□□ -0.56
SF3B3-204ENST00000563739 BRF1Q92994 677 aa11.57□□□□□ -0.56
SF3B3-204ENST00000563739 APOL6Q9BWW8 343 aa11.57□□□□□ -0.56
SF3B3-204ENST00000563739 RNF26Q9BY78 433 aaPredicted RBP11.57□□□□□ -0.56
SF3B3-204ENST00000563739 BCO2Q9BYV7 579 aa11.57□□□□□ -0.56
SF3B3-204ENST00000563739 PIDD1Q9HB75 910 aa11.57□□□□□ -0.56
SF3B3-204ENST00000563739 HEBP1Q9NRV9 189 aa11.57□□□□□ -0.56
SF3B3-204ENST00000563739 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.57□□□□□ -0.56
SF3B3-204ENST00000563739 SSX2IPQ9Y2D8 614 aa11.57□□□□□ -0.56
SF3B3-204ENST00000563739 PRR5-ARHGAP8B1AHC4 643 aa11.56□□□□□ -0.56
SF3B3-204ENST00000563739 GDF9O60383 454 aa11.56□□□□□ -0.56
SF3B3-204ENST00000563739 HNRNPA1P09651 372 aaKnown RBP eCLIP11.56□□□□□ -0.56
SF3B3-204ENST00000563739 CEBPBP17676 345 aa11.56□□□□□ -0.56
SF3B3-204ENST00000563739 ARHGAP8P85298 464 aa11.56□□□□□ -0.56
SF3B3-204ENST00000563739 GRIK3Q13003 919 aa11.56□□□□□ -0.56
SF3B3-204ENST00000563739 LPAL2Q16609 132 aa11.56□□□□□ -0.56
SF3B3-204ENST00000563739 MOXD1Q6UVY6 613 aa11.56□□□□□ -0.56
SF3B3-204ENST00000563739 Q6ZUG5 572 aa11.56□□□□□ -0.56
SF3B3-204ENST00000563739 DAGLBQ8NCG7 672 aa11.56□□□□□ -0.56
SF3B3-204ENST00000563739 CCDC12Q8WUD4 166 aaPredicted RBP11.56□□□□□ -0.56
SF3B3-204ENST00000563739 CCDC51Q96ER9 411 aa11.56□□□□□ -0.56
SF3B3-204ENST00000563739 SHDQ96IW2 340 aa11.56□□□□□ -0.56
SF3B3-204ENST00000563739 CHRDQ9H2X0 955 aa11.56□□□□□ -0.56
SF3B3-204ENST00000563739 C2orf42Q9NWW7 574 aa11.56□□□□□ -0.56
SF3B3-204ENST00000563739 RGL1Q9NZL6 768 aa11.56□□□□□ -0.56
SF3B3-204ENST00000563739 KLK14Q9P0G3 267 aa11.56□□□□□ -0.56
SF3B3-204ENST00000563739 DPP7Q9UHL4 492 aa11.56□□□□□ -0.56
SF3B3-204ENST00000563739 CDV3Q9UKY7 258 aaKnown RBP11.56□□□□□ -0.56
SF3B3-204ENST00000563739 GIT1Q9Y2X7 761 aa11.56□□□□□ -0.56
SF3B3-204ENST00000563739 SPAG17Q6Q759 2223 aa11.55□□□□□ -0.56
SF3B3-204ENST00000563739 TBC1D4O60343 1298 aa11.55□□□□□ -0.56
SF3B3-204ENST00000563739 MAGEA9P43362 315 aa11.55□□□□□ -0.56
SF3B3-204ENST00000563739 QARSP47897 775 aaKnown RBP11.55□□□□□ -0.56
SF3B3-204ENST00000563739 EVCP57679 992 aa11.55□□□□□ -0.56
SF3B3-204ENST00000563739 SPEM2Q0P670 501 aa11.55□□□□□ -0.56
SF3B3-204ENST00000563739 HSP90AA2PQ14568 343 aaPredicted RBP11.55□□□□□ -0.56
SF3B3-204ENST00000563739 PSMD5Q16401 504 aa11.55□□□□□ -0.56
SF3B3-204ENST00000563739 EARS2Q5JPH6 523 aaKnown RBP11.55□□□□□ -0.56
SF3B3-204ENST00000563739 PPM1JQ5JR12 505 aa11.55□□□□□ -0.56
SF3B3-204ENST00000563739 PRSS36Q5K4E3 855 aa11.55□□□□□ -0.56
SF3B3-204ENST00000563739 TANGO2Q6ICL3 276 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms