RNA–Protein interactions for RNA: ENST00000563560.1

RPUSD1-204, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-204ENST00000563560 PIGRP01833 764 aa16.26■□□□□ 0.19
RPUSD1-204ENST00000563560 ALDH2P05091 517 aa16.26■□□□□ 0.19
RPUSD1-204ENST00000563560 SSBP05455 408 aaKnown RBP eCLIP16.26■□□□□ 0.19
RPUSD1-204ENST00000563560 GRM5P41594 1212 aa16.26■□□□□ 0.19
RPUSD1-204ENST00000563560 PTPN14Q15678 1187 aa16.26■□□□□ 0.19
RPUSD1-204ENST00000563560 PTCRAQ6ISU1 281 aaPredicted RBP16.26■□□□□ 0.19
RPUSD1-204ENST00000563560 TAS1R1Q7RTX1 841 aa16.26■□□□□ 0.19
RPUSD1-204ENST00000563560 FAM178BQ8IXR5 827 aa16.26■□□□□ 0.19
RPUSD1-204ENST00000563560 VPS52Q8N1B4 723 aa16.26■□□□□ 0.19
RPUSD1-204ENST00000563560 AUTS2Q8WXX7 1259 aa16.26■□□□□ 0.19
RPUSD1-204ENST00000563560 PPP1R10Q96QC0 940 aaKnown RBP16.26■□□□□ 0.19
RPUSD1-204ENST00000563560 MRPL4Q9BYD3 311 aaKnown RBP16.26■□□□□ 0.19
RPUSD1-204ENST00000563560 S1PR5Q9H228 398 aa16.26■□□□□ 0.19
RPUSD1-204ENST00000563560 IGFLR1Q9H665 355 aa16.26■□□□□ 0.19
RPUSD1-204ENST00000563560 TLE6Q9H808 572 aa16.26■□□□□ 0.19
RPUSD1-204ENST00000563560 TFIP11Q9UBB9 837 aaKnown RBP16.26■□□□□ 0.19
RPUSD1-204ENST00000563560 CACNG4Q9UBN1 327 aa16.26■□□□□ 0.19
RPUSD1-204ENST00000563560 STK17AQ9UEE5 414 aa16.26■□□□□ 0.19
RPUSD1-204ENST00000563560 PUF60Q9UHX1 559 aaKnown RBP16.26■□□□□ 0.19
RPUSD1-204ENST00000563560 FRMD3A2A2Y4 597 aa16.25■□□□□ 0.19
RPUSD1-204ENST00000563560 MYMKA6NI61 221 aa16.25■□□□□ 0.19
RPUSD1-204ENST00000563560 SPTLC2O15270 562 aa16.25■□□□□ 0.19
RPUSD1-204ENST00000563560 CLASP2O75122 1294 aaKnown RBP16.25■□□□□ 0.19
RPUSD1-204ENST00000563560 LIG1P18858 919 aa16.25■□□□□ 0.19
RPUSD1-204ENST00000563560 SMC1AQ14683 1233 aaKnown RBP16.25■□□□□ 0.19
RPUSD1-204ENST00000563560 SMAD2Q15796 467 aaKnown RBP16.25■□□□□ 0.19
RPUSD1-204ENST00000563560 SLC39A4Q6P5W5 647 aa16.25■□□□□ 0.19
RPUSD1-204ENST00000563560 SYCE2Q6PIF2 218 aa16.25■□□□□ 0.19
RPUSD1-204ENST00000563560 SHC4Q6S5L8 630 aa16.25■□□□□ 0.19
RPUSD1-204ENST00000563560 ZPBP2Q6X784 338 aa16.25■□□□□ 0.19
RPUSD1-204ENST00000563560 HACE1Q8IYU2 909 aa16.25■□□□□ 0.19
RPUSD1-204ENST00000563560 SLC22A17Q8WUG5 538 aa16.25■□□□□ 0.19
RPUSD1-204ENST00000563560 SUSD6Q92537 303 aa16.25■□□□□ 0.19
RPUSD1-204ENST00000563560 HERC2P3Q9BVR0 1158 aa16.25■□□□□ 0.19
RPUSD1-204ENST00000563560 ST6GALNAC4Q9H4F1 302 aa16.25■□□□□ 0.19
RPUSD1-204ENST00000563560 ENTPD7Q9NQZ7 604 aa16.25■□□□□ 0.19
RPUSD1-204ENST00000563560 CHST7Q9NS84 486 aa16.25■□□□□ 0.19
RPUSD1-204ENST00000563560 BARX2Q9UMQ3 279 aaPredicted RBP16.25■□□□□ 0.19
RPUSD1-204ENST00000563560 FAN1Q9Y2M0 1017 aa16.25■□□□□ 0.19
RPUSD1-204ENST00000563560 C19orf67A6NJJ6 358 aa16.24■□□□□ 0.19
RPUSD1-204ENST00000563560 TOM1L1O75674 476 aa16.24■□□□□ 0.19
RPUSD1-204ENST00000563560 SOD2P04179 222 aa16.24■□□□□ 0.19
RPUSD1-204ENST00000563560 MCF2P10911 925 aa16.24■□□□□ 0.19
RPUSD1-204ENST00000563560 GTF2BQ00403 316 aa16.24■□□□□ 0.19
RPUSD1-204ENST00000563560 MCL1Q07820 350 aa16.24■□□□□ 0.19
RPUSD1-204ENST00000563560 SMAD4Q13485 552 aaKnown RBP16.24■□□□□ 0.19
RPUSD1-204ENST00000563560 DHX8Q14562 1220 aaKnown RBP16.24■□□□□ 0.19
RPUSD1-204ENST00000563560 PUS10Q3MIT2 529 aaKnown RBP16.24■□□□□ 0.19
RPUSD1-204ENST00000563560 KIAA0319Q5VV43 1072 aa16.24■□□□□ 0.19
RPUSD1-204ENST00000563560 MPZL3Q6UWV2 235 aa16.24■□□□□ 0.19
RPUSD1-204ENST00000563560 TMC7Q7Z402 723 aa16.24■□□□□ 0.19
RPUSD1-204ENST00000563560 HAUS6Q7Z4H7 955 aa16.24■□□□□ 0.19
RPUSD1-204ENST00000563560 FEZF2Q8TBJ5 459 aa16.24■□□□□ 0.19
RPUSD1-204ENST00000563560 KHSRPQ92945 711 aaKnown RBP eCLIP16.24■□□□□ 0.19
RPUSD1-204ENST00000563560 ZMAT2Q96NC0 199 aaKnown RBP16.24■□□□□ 0.19
RPUSD1-204ENST00000563560 ADPGKQ9BRR6 497 aa16.24■□□□□ 0.19
RPUSD1-204ENST00000563560 GPR62Q9BZJ7 368 aa16.24■□□□□ 0.19
RPUSD1-204ENST00000563560 PARVGQ9HBI0 331 aa16.24■□□□□ 0.19
RPUSD1-204ENST00000563560 LARSQ9P2J5 1176 aaKnown RBP16.24■□□□□ 0.19
RPUSD1-204ENST00000563560 PARP2Q9UGN5 583 aa16.24■□□□□ 0.19
RPUSD1-204ENST00000563560 TNFRSF10AO00220 468 aa16.23■□□□□ 0.19
RPUSD1-204ENST00000563560 PAPLNO95428 1278 aa16.23■□□□□ 0.19
RPUSD1-204ENST00000563560 CXCL14O95715 111 aa16.23■□□□□ 0.19
RPUSD1-204ENST00000563560 SOX4Q06945 474 aaPredicted RBP16.23■□□□□ 0.19
RPUSD1-204ENST00000563560 TUSC3Q13454 348 aa16.23■□□□□ 0.19
RPUSD1-204ENST00000563560 FOXD4L5Q5VV16 416 aaPredicted RBP16.23■□□□□ 0.19
RPUSD1-204ENST00000563560 SPRYD3Q8NCJ5 442 aa16.23■□□□□ 0.19
RPUSD1-204ENST00000563560 MICAL1Q8TDZ2 1067 aa16.23■□□□□ 0.19
RPUSD1-204ENST00000563560 FOXD4L4Q8WXT5 416 aaPredicted RBP16.23■□□□□ 0.19
RPUSD1-204ENST00000563560 DDX12PQ92771 950 aa16.23■□□□□ 0.19
RPUSD1-204ENST00000563560 PPP2R3CQ969Q6 453 aa16.23■□□□□ 0.19
RPUSD1-204ENST00000563560 CHAMP1Q96JM3 812 aa16.23■□□□□ 0.19
RPUSD1-204ENST00000563560 SNX27Q96L92 541 aa16.23■□□□□ 0.19
RPUSD1-204ENST00000563560 ZNF396Q96N95 335 aaPredicted RBP16.23■□□□□ 0.19
RPUSD1-204ENST00000563560 RXFP1Q9HBX9 757 aa16.23■□□□□ 0.19
RPUSD1-204ENST00000563560 KCNG1Q9UIX4 513 aa16.23■□□□□ 0.19
RPUSD1-204ENST00000563560 CD207Q9UJ71 328 aa16.23■□□□□ 0.19
RPUSD1-204ENST00000563560 TBX20Q9UMR3 447 aa16.23■□□□□ 0.19
RPUSD1-204ENST00000563560 GDAQ9Y2T3 454 aa16.23■□□□□ 0.19
RPUSD1-204ENST00000563560 PRG3Q9Y2Y8 225 aaPredicted RBP16.23■□□□□ 0.19
RPUSD1-204ENST00000563560 HCFC2Q9Y5Z7 792 aa16.23■□□□□ 0.19
RPUSD1-204ENST00000563560 SMIM28A0A1B0GU29 152 aa16.22■□□□□ 0.19
RPUSD1-204ENST00000563560 FSD2A1L4K1 749 aa16.22■□□□□ 0.19
RPUSD1-204ENST00000563560 TRAK2O60296 914 aa16.22■□□□□ 0.19
RPUSD1-204ENST00000563560 ADRB2P07550 413 aa16.22■□□□□ 0.19
RPUSD1-204ENST00000563560 KCNE1P15382 129 aa16.22■□□□□ 0.19
RPUSD1-204ENST00000563560 SCP2P22307 547 aa16.22■□□□□ 0.19
RPUSD1-204ENST00000563560 NMT1P30419 496 aaKnown RBP16.22■□□□□ 0.19
RPUSD1-204ENST00000563560 OR1G1P47890 313 aa16.22■□□□□ 0.19
RPUSD1-204ENST00000563560 SMTNP53814 917 aa16.22■□□□□ 0.19
RPUSD1-204ENST00000563560 DSG1Q02413 1049 aa16.22■□□□□ 0.19
RPUSD1-204ENST00000563560 DNM1Q05193 864 aaKnown RBP16.22■□□□□ 0.19
RPUSD1-204ENST00000563560 ZP2Q05996 745 aa16.22■□□□□ 0.19
RPUSD1-204ENST00000563560 STK38Q15208 465 aa16.22■□□□□ 0.19
RPUSD1-204ENST00000563560 CLUL1Q15846 466 aa16.22■□□□□ 0.19
RPUSD1-204ENST00000563560 SLC10A6Q3KNW5 377 aa16.22■□□□□ 0.19
RPUSD1-204ENST00000563560 ZNF568Q3ZCX4 644 aa16.22■□□□□ 0.19
RPUSD1-204ENST00000563560 RRAGBQ5VZM2 374 aa16.22■□□□□ 0.19
RPUSD1-204ENST00000563560 ATL3Q6DD88 541 aa16.22■□□□□ 0.19
RPUSD1-204ENST00000563560 ANKRD54Q6NXT1 300 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms