RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 MFAP3LO75121 409 aa6.52□□□□□ -1.37
LINC00254-201ENST00000563416 PHF2O75151 1096 aa6.52□□□□□ -1.37
LINC00254-201ENST00000563416 IPO13O94829 963 aaKnown RBP6.52□□□□□ -1.37
LINC00254-201ENST00000563416 INSRRP14616 1297 aa6.52□□□□□ -1.37
LINC00254-201ENST00000563416 GYPEP15421 78 aa6.52□□□□□ -1.37
LINC00254-201ENST00000563416 SLC5A3P53794 718 aa6.52□□□□□ -1.37
LINC00254-201ENST00000563416 CDK17Q00537 523 aa6.52□□□□□ -1.37
LINC00254-201ENST00000563416 ELAVL1Q15717 326 aaKnown RBP6.52□□□□□ -1.37
LINC00254-201ENST00000563416 ANO4Q32M45 955 aa6.52□□□□□ -1.37
LINC00254-201ENST00000563416 CMIPQ8IY22 773 aa6.52□□□□□ -1.37
LINC00254-201ENST00000563416 AMOTL1Q8IY63 956 aa6.52□□□□□ -1.37
LINC00254-201ENST00000563416 THEMISQ8N1K5 641 aaPredicted RBP6.52□□□□□ -1.37
LINC00254-201ENST00000563416 CNTD1Q8N815 330 aa6.52□□□□□ -1.37
LINC00254-201ENST00000563416 MIEF2Q96C03 454 aa6.52□□□□□ -1.37
LINC00254-201ENST00000563416 EPC1Q9H2F5 836 aa6.52□□□□□ -1.37
LINC00254-201ENST00000563416 AURKAIP1Q9NWT8 199 aaPredicted RBP6.52□□□□□ -1.37
LINC00254-201ENST00000563416 DNAJC28Q9NX36 388 aa6.52□□□□□ -1.37
LINC00254-201ENST00000563416 GIT1Q9Y2X7 761 aa6.52□□□□□ -1.37
LINC00254-201ENST00000563416 SH3BP1Q9Y3L3 701 aa6.52□□□□□ -1.37
LINC00254-201ENST00000563416 DHX29Q7Z478 1369 aaKnown RBP6.52□□□□□ -1.37
LINC00254-201ENST00000563416 UNC13BO14795 1591 aa6.52□□□□□ -1.37
LINC00254-201ENST00000563416 ARID4BQ4LE39 1312 aaPredicted RBP6.51□□□□□ -1.37
LINC00254-201ENST00000563416 CNTLNQ9NXG0 1405 aa6.51□□□□□ -1.37
LINC00254-201ENST00000563416 RRBP1Q9P2E9 1410 aaKnown RBP6.51□□□□□ -1.37
LINC00254-201ENST00000563416 ERVK-21P61565 698 aa6.51□□□□□ -1.37
LINC00254-201ENST00000563416 KLF1Q13351 362 aaPredicted RBP6.51□□□□□ -1.37
LINC00254-201ENST00000563416 UBE3CQ15386 1083 aa6.51□□□□□ -1.37
LINC00254-201ENST00000563416 CDSNQ15517 529 aa6.51□□□□□ -1.37
LINC00254-201ENST00000563416 MUM1Q2TAK8 710 aa6.51□□□□□ -1.37
LINC00254-201ENST00000563416 C19orf54Q5BKX5 351 aa6.51□□□□□ -1.37
LINC00254-201ENST00000563416 TOR2AQ5JU69 321 aa6.51□□□□□ -1.37
LINC00254-201ENST00000563416 SPDYAQ5MJ70 313 aa6.51□□□□□ -1.37
LINC00254-201ENST00000563416 GSPT2Q8IYD1 628 aaKnown RBP6.51□□□□□ -1.37
LINC00254-201ENST00000563416 SH3RF3Q8TEJ3 882 aaPredicted RBP6.51□□□□□ -1.37
LINC00254-201ENST00000563416 SNX33Q8WV41 574 aa6.51□□□□□ -1.37
LINC00254-201ENST00000563416 FATE1Q969F0 183 aa6.51□□□□□ -1.37
LINC00254-201ENST00000563416 ZNF512Q96ME7 567 aaPredicted RBP6.51□□□□□ -1.37
LINC00254-201ENST00000563416 IFT122Q9HBG6 1241 aa6.51□□□□□ -1.37
LINC00254-201ENST00000563416 CCM2LQ9NUG4 571 aaPredicted RBP6.51□□□□□ -1.37
LINC00254-201ENST00000563416 COL4A3BPQ9Y5P4 624 aa6.51□□□□□ -1.37
LINC00254-201ENST00000563416 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.51□□□□□ -1.37
LINC00254-201ENST00000563416 RPTORQ8N122 1335 aa6.5□□□□□ -1.37
LINC00254-201ENST00000563416 ERBINQ96RT1 1412 aa6.5□□□□□ -1.37
LINC00254-201ENST00000563416 STRCQ7RTU9 1775 aa6.5□□□□□ -1.37
LINC00254-201ENST00000563416 VWDEQ8N2E2 1590 aa6.5□□□□□ -1.37
LINC00254-201ENST00000563416 LMTK3Q96Q04 1460 aa6.5□□□□□ -1.37
LINC00254-201ENST00000563416 ALG1L2C9J202 215 aa6.5□□□□□ -1.37
LINC00254-201ENST00000563416 TMEM127O75204 238 aa6.5□□□□□ -1.37
LINC00254-201ENST00000563416 GNAT2P19087 354 aa6.5□□□□□ -1.37
LINC00254-201ENST00000563416 IBSPP21815 317 aaPredicted RBP6.5□□□□□ -1.37
LINC00254-201ENST00000563416 ACRV1P26436 265 aa6.5□□□□□ -1.37
LINC00254-201ENST00000563416 GPR3P46089 330 aa6.5□□□□□ -1.37
LINC00254-201ENST00000563416 AMPD3Q01432 767 aa6.5□□□□□ -1.37
LINC00254-201ENST00000563416 CRHR2Q13324 411 aa6.5□□□□□ -1.37
LINC00254-201ENST00000563416 BTNL9Q6UXG8 535 aa6.5□□□□□ -1.37
LINC00254-201ENST00000563416 KCNK18Q7Z418 384 aa6.5□□□□□ -1.37
LINC00254-201ENST00000563416 ANKRD13AQ8IZ07 590 aa6.5□□□□□ -1.37
LINC00254-201ENST00000563416 MSL3Q8N5Y2 521 aaKnown RBP6.5□□□□□ -1.37
LINC00254-201ENST00000563416 GLB1L3Q8NCI6 653 aaPredicted RBP6.5□□□□□ -1.37
LINC00254-201ENST00000563416 IL17RAQ96F46 866 aa6.5□□□□□ -1.37
LINC00254-201ENST00000563416 ACE2Q9BYF1 805 aaPredicted RBP6.5□□□□□ -1.37
LINC00254-201ENST00000563416 POLR1AO95602 1720 aaPredicted RBP6.5□□□□□ -1.37
LINC00254-201ENST00000563416 ABCC3O15438 1527 aa6.5□□□□□ -1.37
LINC00254-201ENST00000563416 NCOA1Q15788 1441 aa6.5□□□□□ -1.37
LINC00254-201ENST00000563416 ANKRD62A6NC57 917 aa6.49□□□□□ -1.37
LINC00254-201ENST00000563416 CFBP00751 764 aa6.49□□□□□ -1.37
LINC00254-201ENST00000563416 GASTP01350 101 aa6.49□□□□□ -1.37
LINC00254-201ENST00000563416 TSPY4P0CV99 314 aa6.49□□□□□ -1.37
LINC00254-201ENST00000563416 TSPY10P0CW01 314 aa6.49□□□□□ -1.37
LINC00254-201ENST00000563416 CTSSP25774 331 aa6.49□□□□□ -1.37
LINC00254-201ENST00000563416 CASRP41180 1078 aa6.49□□□□□ -1.37
LINC00254-201ENST00000563416 GZMKP49863 264 aa6.49□□□□□ -1.37
LINC00254-201ENST00000563416 GUCY2FP51841 1108 aa6.49□□□□□ -1.37
LINC00254-201ENST00000563416 KRTAP10-2P60368 255 aa6.49□□□□□ -1.37
LINC00254-201ENST00000563416 SRSF2Q01130 221 aaKnown RBP6.49□□□□□ -1.37
LINC00254-201ENST00000563416 PUM1Q14671 1186 aaKnown RBP eCLIP6.49□□□□□ -1.37
LINC00254-201ENST00000563416 MUM1L1Q5H9M0 696 aa6.49□□□□□ -1.37
LINC00254-201ENST00000563416 PDZD4Q76G19 769 aaPredicted RBP6.49□□□□□ -1.37
LINC00254-201ENST00000563416 APBB1IPQ7Z5R6 666 aaPredicted RBP6.49□□□□□ -1.37
LINC00254-201ENST00000563416 ZNF480Q8WV37 535 aa6.49□□□□□ -1.37
LINC00254-201ENST00000563416 SSH1Q8WYL5 1049 aa6.49□□□□□ -1.37
LINC00254-201ENST00000563416 CDC5LQ99459 802 aaKnown RBP6.49□□□□□ -1.37
LINC00254-201ENST00000563416 KRTAP4-7Q9BYR0 210 aa6.49□□□□□ -1.37
LINC00254-201ENST00000563416 IQGAP3Q86VI3 1631 aa6.49□□□□□ -1.37
LINC00254-201ENST00000563416 TET3O43151 1660 aa6.49□□□□□ -1.37
LINC00254-201ENST00000563416 MYO5BQ9ULV0 1848 aa6.48□□□□□ -1.37
LINC00254-201ENST00000563416 KIF15Q9NS87 1388 aa6.48□□□□□ -1.37
LINC00254-201ENST00000563416 CCT2P78371 535 aaKnown RBP6.48□□□□□ -1.37
LINC00254-201ENST00000563416 ADRM1Q16186 407 aa6.48□□□□□ -1.37
LINC00254-201ENST00000563416 NRN1LQ496H8 165 aa6.48□□□□□ -1.37
LINC00254-201ENST00000563416 USP39Q53GS9 565 aaKnown RBP6.48□□□□□ -1.37
LINC00254-201ENST00000563416 MBNL2Q5VZF2 373 aaKnown RBP6.48□□□□□ -1.37
LINC00254-201ENST00000563416 ABHD15Q6UXT9 468 aa6.48□□□□□ -1.37
LINC00254-201ENST00000563416 PRPF38AQ8NAV1 312 aaKnown RBP6.48□□□□□ -1.37
LINC00254-201ENST00000563416 TSPEARQ8WU66 669 aa6.48□□□□□ -1.37
LINC00254-201ENST00000563416 ST8SIA2Q92186 375 aa6.48□□□□□ -1.37
LINC00254-201ENST00000563416 ENKD1Q9H0I2 346 aa6.48□□□□□ -1.37
LINC00254-201ENST00000563416 GREM2Q9H772 168 aa6.48□□□□□ -1.37
LINC00254-201ENST00000563416 PCDH12Q9NPG4 1184 aa6.48□□□□□ -1.37
LINC00254-201ENST00000563416 HDAC5Q9UQL6 1122 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms