RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 FSIP1Q8NA03 581 aa9.37□□□□□ -0.91
UBR1-204ENST00000563239 GLIS3Q8NEA6 775 aa9.37□□□□□ -0.91
UBR1-204ENST00000563239 HPS3Q969F9 1004 aa9.37□□□□□ -0.91
UBR1-204ENST00000563239 MRPL38Q96DV4 380 aaKnown RBP9.37□□□□□ -0.91
UBR1-204ENST00000563239 PAGE5Q96GU1 130 aa9.37□□□□□ -0.91
UBR1-204ENST00000563239 SNX27Q96L92 541 aa9.37□□□□□ -0.91
UBR1-204ENST00000563239 ZNF558Q96NG5 402 aa9.37□□□□□ -0.91
UBR1-204ENST00000563239 VN1R3Q9BXE9 311 aa9.37□□□□□ -0.91
UBR1-204ENST00000563239 LMAN2LQ9H0V9 348 aa9.37□□□□□ -0.91
UBR1-204ENST00000563239 BLZF1Q9H2G9 400 aa9.37□□□□□ -0.91
UBR1-204ENST00000563239 MAGEF1Q9HAY2 307 aa9.37□□□□□ -0.91
UBR1-204ENST00000563239 OLFML3Q9NRN5 406 aa9.37□□□□□ -0.91
UBR1-204ENST00000563239 PANK4Q9NVE7 773 aa9.37□□□□□ -0.91
UBR1-204ENST00000563239 TBC1D7Q9P0N9 293 aa9.37□□□□□ -0.91
UBR1-204ENST00000563239 SEL1LQ9UBV2 794 aa9.37□□□□□ -0.91
UBR1-204ENST00000563239 PARP2Q9UGN5 583 aa9.37□□□□□ -0.91
UBR1-204ENST00000563239 SSUH2Q9Y2M2 353 aa9.37□□□□□ -0.91
UBR1-204ENST00000563239 PCDHB12Q9Y5F1 795 aa9.37□□□□□ -0.91
UBR1-204ENST00000563239 PCDHGC5Q9Y5F6 944 aa9.37□□□□□ -0.91
UBR1-204ENST00000563239 TISP43B9A030 160 aa9.36□□□□□ -0.91
UBR1-204ENST00000563239 F8W810 466 aa9.36□□□□□ -0.91
UBR1-204ENST00000563239 FSCN2O14926 492 aa9.36□□□□□ -0.91
UBR1-204ENST00000563239 KLRC4O43908 158 aa9.36□□□□□ -0.91
UBR1-204ENST00000563239 ZC3H11AO75152 810 aaKnown RBP eCLIP9.36□□□□□ -0.91
UBR1-204ENST00000563239 MYBP10242 640 aa9.36□□□□□ -0.91
UBR1-204ENST00000563239 IDEP14735 1019 aa9.36□□□□□ -0.91
UBR1-204ENST00000563239 SCP2P22307 547 aa9.36□□□□□ -0.91
UBR1-204ENST00000563239 ANP32AP39687 249 aaKnown RBP9.36□□□□□ -0.91
UBR1-204ENST00000563239 AFMP43652 599 aa9.36□□□□□ -0.91
UBR1-204ENST00000563239 ERVFC1P60507 584 aa9.36□□□□□ -0.91
UBR1-204ENST00000563239 CSPP1Q1MSJ5 1256 aa9.36□□□□□ -0.91
UBR1-204ENST00000563239 TMEM132AQ24JP5 1023 aa9.36□□□□□ -0.91
UBR1-204ENST00000563239 ZNF568Q3ZCX4 644 aa9.36□□□□□ -0.91
UBR1-204ENST00000563239 SEZ6Q53EL9 994 aa9.36□□□□□ -0.91
UBR1-204ENST00000563239 HERC4Q5GLZ8 1057 aaPredicted RBP9.36□□□□□ -0.91
UBR1-204ENST00000563239 ZBTB41Q5SVQ8 909 aa9.36□□□□□ -0.91
UBR1-204ENST00000563239 EPM2AIP1Q7L775 607 aaPredicted RBP9.36□□□□□ -0.91
UBR1-204ENST00000563239 HACE1Q8IYU2 909 aa9.36□□□□□ -0.91
UBR1-204ENST00000563239 ENGASEQ8NFI3 743 aa9.36□□□□□ -0.91
UBR1-204ENST00000563239 URGCPQ8TCY9 931 aa9.36□□□□□ -0.91
UBR1-204ENST00000563239 POF1BQ8WVV4 589 aa9.36□□□□□ -0.91
UBR1-204ENST00000563239 PPM1EQ8WY54 764 aa9.36□□□□□ -0.91
UBR1-204ENST00000563239 ADPGKQ9BRR6 497 aa9.36□□□□□ -0.91
UBR1-204ENST00000563239 LRRC27Q9C0I9 530 aa9.36□□□□□ -0.91
UBR1-204ENST00000563239 GBP3Q9H0R5 595 aa9.36□□□□□ -0.91
UBR1-204ENST00000563239 MRPL44Q9H9J2 332 aaKnown RBP9.36□□□□□ -0.91
UBR1-204ENST00000563239 TSHZ2Q9NRE2 1034 aa9.36□□□□□ -0.91
UBR1-204ENST00000563239 AAASQ9NRG9 546 aa9.36□□□□□ -0.91
UBR1-204ENST00000563239 MARCH5Q9NX47 278 aa9.36□□□□□ -0.91
UBR1-204ENST00000563239 SPG21Q9NZD8 308 aa9.36□□□□□ -0.91
UBR1-204ENST00000563239 KANSL3Q9P2N6 904 aa9.36□□□□□ -0.91
UBR1-204ENST00000563239 GDAQ9Y2T3 454 aa9.36□□□□□ -0.91
UBR1-204ENST00000563239 STYXL1Q9Y6J8 313 aa9.36□□□□□ -0.91
UBR1-204ENST00000563239 A0A0B4J269 797 aa9.35□□□□□ -0.91
UBR1-204ENST00000563239 NRP1O14786 923 aa9.35□□□□□ -0.91
UBR1-204ENST00000563239 CLDN3O15551 220 aa9.35□□□□□ -0.91
UBR1-204ENST00000563239 GTPBP6O43824 516 aaPredicted RBP9.35□□□□□ -0.91
UBR1-204ENST00000563239 IGFBP6P24592 240 aaPredicted RBP9.35□□□□□ -0.91
UBR1-204ENST00000563239 ADSSP30520 456 aa9.35□□□□□ -0.91
UBR1-204ENST00000563239 SYKP43405 635 aa9.35□□□□□ -0.91
UBR1-204ENST00000563239 OSTNP61366 133 aa9.35□□□□□ -0.91
UBR1-204ENST00000563239 ASIC1P78348 528 aa9.35□□□□□ -0.91
UBR1-204ENST00000563239 AMPD3Q01432 767 aa9.35□□□□□ -0.91
UBR1-204ENST00000563239 UBE3AQ05086 875 aa9.35□□□□□ -0.91
UBR1-204ENST00000563239 RNASELQ05823 741 aaKnown RBP9.35□□□□□ -0.91
UBR1-204ENST00000563239 GRIK3Q13003 919 aa9.35□□□□□ -0.91
UBR1-204ENST00000563239 SNW1Q13573 536 aaKnown RBP9.35□□□□□ -0.91
UBR1-204ENST00000563239 NOLC1Q14978 699 aaKnown RBP eCLIP9.35□□□□□ -0.91
UBR1-204ENST00000563239 COL19A1Q14993 1142 aa9.35□□□□□ -0.91
UBR1-204ENST00000563239 SLC10A6Q3KNW5 377 aa9.35□□□□□ -0.91
UBR1-204ENST00000563239 TPRNQ4KMQ1 711 aa9.35□□□□□ -0.91
UBR1-204ENST00000563239 L1TD1Q5T7N2 865 aaKnown RBP9.35□□□□□ -0.91
UBR1-204ENST00000563239 UNC13DQ70J99 1090 aa9.35□□□□□ -0.91
UBR1-204ENST00000563239 CCDC65Q8IXS2 484 aa9.35□□□□□ -0.91
UBR1-204ENST00000563239 THNSL1Q8IYQ7 743 aa9.35□□□□□ -0.91
UBR1-204ENST00000563239 FMR1NBQ8N0W7 255 aaPredicted RBP9.35□□□□□ -0.91
UBR1-204ENST00000563239 MICALL1Q8N3F8 863 aa9.35□□□□□ -0.91
UBR1-204ENST00000563239 MRPS27Q92552 414 aaKnown RBP9.35□□□□□ -0.91
UBR1-204ENST00000563239 HVCN1Q96D96 273 aa9.35□□□□□ -0.91
UBR1-204ENST00000563239 IGSF21Q96ID5 467 aa9.35□□□□□ -0.91
UBR1-204ENST00000563239 ZMAT2Q96NC0 199 aaKnown RBP9.35□□□□□ -0.91
UBR1-204ENST00000563239 PPP1R10Q96QC0 940 aaKnown RBP9.35□□□□□ -0.91
UBR1-204ENST00000563239 PAAF1Q9BRP4 392 aa9.35□□□□□ -0.91
UBR1-204ENST00000563239 PYM1Q9BRP8 204 aaKnown RBP9.35□□□□□ -0.91
UBR1-204ENST00000563239 TMEM175Q9BSA9 504 aa9.35□□□□□ -0.91
UBR1-204ENST00000563239 TCHPQ9BT92 498 aa9.35□□□□□ -0.91
UBR1-204ENST00000563239 CHMP5Q9NZZ3 219 aa9.35□□□□□ -0.91
UBR1-204ENST00000563239 ANKFY1Q9P2R3 1169 aa9.35□□□□□ -0.91
UBR1-204ENST00000563239 CACNG4Q9UBN1 327 aa9.35□□□□□ -0.91
UBR1-204ENST00000563239 USP25Q9UHP3 1055 aa9.35□□□□□ -0.91
UBR1-204ENST00000563239 LZTS1Q9Y250 596 aa9.35□□□□□ -0.91
UBR1-204ENST00000563239 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.34□□□□□ -0.91
UBR1-204ENST00000563239 SMIM28A0A1B0GU29 152 aa9.34□□□□□ -0.91
UBR1-204ENST00000563239 PVALEFA0A1B0GWK0 134 aa9.34□□□□□ -0.91
UBR1-204ENST00000563239 HNRNPDLO14979 420 aaKnown RBP9.34□□□□□ -0.91
UBR1-204ENST00000563239 GADD45BO75293 160 aaPredicted RBP9.34□□□□□ -0.91
UBR1-204ENST00000563239 PRPF6O94906 941 aaKnown RBP9.34□□□□□ -0.91
UBR1-204ENST00000563239 ZNF202O95125 648 aa9.34□□□□□ -0.91
UBR1-204ENST00000563239 CSPG5O95196 566 aa9.34□□□□□ -0.91
UBR1-204ENST00000563239 GCNT3O95395 438 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms