RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 FAM114A2Q9NRY5 505 aa8.07□□□□□ -1.12
TCF4-216ENST00000562680 CPA4Q9UI42 421 aa8.07□□□□□ -1.12
TCF4-216ENST00000562680 MSCO60682 206 aa8.06□□□□□ -1.12
TCF4-216ENST00000562680 TMEM132BQ14DG7 1078 aa8.06□□□□□ -1.12
TCF4-216ENST00000562680 LGSNQ5TDP6 509 aa8.06□□□□□ -1.12
TCF4-216ENST00000562680 BZW1Q7L1Q6 419 aaKnown RBP8.06□□□□□ -1.12
TCF4-216ENST00000562680 RBM41Q96IZ5 413 aaKnown RBP8.06□□□□□ -1.12
TCF4-216ENST00000562680 PPP1R16BQ96T49 567 aa8.06□□□□□ -1.12
TCF4-216ENST00000562680 CNOT8Q9UFF9 292 aaKnown RBP8.06□□□□□ -1.12
TCF4-216ENST00000562680 INTUQ9ULD6 942 aa8.06□□□□□ -1.12
TCF4-216ENST00000562680 H3BRB1 525 aa8.06□□□□□ -1.12
TCF4-216ENST00000562680 RPS6KA5O75582 802 aa8.06□□□□□ -1.12
TCF4-216ENST00000562680 CYP27A1Q02318 531 aa8.06□□□□□ -1.12
TCF4-216ENST00000562680 OR6B2Q6IFH4 312 aa8.06□□□□□ -1.12
TCF4-216ENST00000562680 ABRAQ8N0Z2 381 aa8.06□□□□□ -1.12
TCF4-216ENST00000562680 ETNPPLQ8TBG4 499 aa8.06□□□□□ -1.12
TCF4-216ENST00000562680 HAS1Q92839 578 aa8.06□□□□□ -1.12
TCF4-216ENST00000562680 TUT1Q9H6E5 874 aaKnown RBP8.06□□□□□ -1.12
TCF4-216ENST00000562680 AFG3L2Q9Y4W6 797 aa8.06□□□□□ -1.12
TCF4-216ENST00000562680 GNA15P30679 374 aa8.06□□□□□ -1.12
TCF4-216ENST00000562680 CDK17Q00537 523 aa8.06□□□□□ -1.12
TCF4-216ENST00000562680 NCOA4Q13772 614 aa8.06□□□□□ -1.12
TCF4-216ENST00000562680 SLC18A3Q16572 532 aa8.06□□□□□ -1.12
TCF4-216ENST00000562680 CCDC144BQ3MJ40 725 aa8.06□□□□□ -1.12
TCF4-216ENST00000562680 SCYL2Q6P3W7 929 aa8.06□□□□□ -1.12
TCF4-216ENST00000562680 PPP1R21Q6ZMI0 780 aa8.06□□□□□ -1.12
TCF4-216ENST00000562680 ZNF410Q86VK4 478 aa8.06□□□□□ -1.12
TCF4-216ENST00000562680 SCFD1Q8WVM8 642 aa8.06□□□□□ -1.12
TCF4-216ENST00000562680 N4BP2L2Q92802 583 aaPredicted RBP8.06□□□□□ -1.12
TCF4-216ENST00000562680 UVRAGQ9P2Y5 699 aa8.06□□□□□ -1.12
TCF4-216ENST00000562680 TOGARAM1Q9Y4F4 1720 aa8.06□□□□□ -1.12
TCF4-216ENST00000562680 SPATA31C2B4DYI2 1134 aa8.06□□□□□ -1.12
TCF4-216ENST00000562680 ATP8B1O43520 1251 aa8.06□□□□□ -1.12
TCF4-216ENST00000562680 CABYRO75952 493 aa8.06□□□□□ -1.12
TCF4-216ENST00000562680 ARL4AP40617 200 aa8.06□□□□□ -1.12
TCF4-216ENST00000562680 GOLGA8FQ08AF8 430 aa8.06□□□□□ -1.12
TCF4-216ENST00000562680 GOLGA8DPQ0D2H9 430 aa8.06□□□□□ -1.12
TCF4-216ENST00000562680 ZC2HC1CQ53FD0 456 aaPredicted RBP8.06□□□□□ -1.12
TCF4-216ENST00000562680 MPZL3Q6UWV2 235 aa8.06□□□□□ -1.12
TCF4-216ENST00000562680 CCDC25Q86WR0 208 aa8.06□□□□□ -1.12
TCF4-216ENST00000562680 PSMB7Q99436 277 aa8.06□□□□□ -1.12
TCF4-216ENST00000562680 TARS2Q9BW92 718 aaKnown RBP8.06□□□□□ -1.12
TCF4-216ENST00000562680 SSX2IPQ9Y2D8 614 aa8.06□□□□□ -1.12
TCF4-216ENST00000562680 SLC45A1Q9Y2W3 748 aa8.06□□□□□ -1.12
TCF4-216ENST00000562680 MAPK13O15264 365 aa8.06□□□□□ -1.12
TCF4-216ENST00000562680 TFDP2Q14188 446 aa8.06□□□□□ -1.12
TCF4-216ENST00000562680 ELF2Q15723 593 aa8.06□□□□□ -1.12
TCF4-216ENST00000562680 GLE1Q53GS7 698 aaKnown RBP8.06□□□□□ -1.12
TCF4-216ENST00000562680 SCARA5Q6ZMJ2 495 aa8.06□□□□□ -1.12
TCF4-216ENST00000562680 RSRC2Q7L4I2 434 aaKnown RBP8.06□□□□□ -1.12
TCF4-216ENST00000562680 TTC13Q8NBP0 860 aa8.06□□□□□ -1.12
TCF4-216ENST00000562680 REPS2Q8NFH8 660 aa8.06□□□□□ -1.12
TCF4-216ENST00000562680 P3H4Q92791 437 aa8.06□□□□□ -1.12
TCF4-216ENST00000562680 AGPAT1Q99943 283 aa8.06□□□□□ -1.12
TCF4-216ENST00000562680 MTG1Q9BT17 334 aaPredicted RBP8.06□□□□□ -1.12
TCF4-216ENST00000562680 NIF3L1Q9GZT8 377 aa8.06□□□□□ -1.12
TCF4-216ENST00000562680 POLD4Q9HCU8 107 aa8.06□□□□□ -1.12
TCF4-216ENST00000562680 UBQLN1Q9UMX0 589 aaKnown RBP8.06□□□□□ -1.12
TCF4-216ENST00000562680 ZMYM2Q9UBW7 1377 aa8.05□□□□□ -1.12
TCF4-216ENST00000562680 PRPSAP2O60256 369 aa8.05□□□□□ -1.12
TCF4-216ENST00000562680 ZNF18P17022 549 aa8.05□□□□□ -1.12
TCF4-216ENST00000562680 MAP7D1Q3KQU3 841 aa8.05□□□□□ -1.12
TCF4-216ENST00000562680 ARL13BQ3SXY8 428 aa8.05□□□□□ -1.12
TCF4-216ENST00000562680 SGO2Q562F6 1265 aa8.05□□□□□ -1.12
TCF4-216ENST00000562680 RNF187Q5TA31 235 aaPredicted RBP8.05□□□□□ -1.12
TCF4-216ENST00000562680 ZNF280DQ6N043 979 aa8.05□□□□□ -1.12
TCF4-216ENST00000562680 PLPPR4Q7Z2D5 763 aa8.05□□□□□ -1.12
TCF4-216ENST00000562680 NT5DC4Q86YG4 428 aa8.05□□□□□ -1.12
TCF4-216ENST00000562680 BBS5Q8N3I7 341 aa8.05□□□□□ -1.12
TCF4-216ENST00000562680 GBP7Q8N8V2 638 aaPredicted RBP8.05□□□□□ -1.12
TCF4-216ENST00000562680 TINF2Q9BSI4 451 aa8.05□□□□□ -1.12
TCF4-216ENST00000562680 PCDHB2Q9Y5E7 798 aa8.05□□□□□ -1.12
TCF4-216ENST00000562680 SCN7AQ01118 1682 aa8.05□□□□□ -1.12
TCF4-216ENST00000562680 THSD7AQ9UPZ6 1657 aa8.05□□□□□ -1.12
TCF4-216ENST00000562680 RTN2O75298 545 aa8.05□□□□□ -1.12
TCF4-216ENST00000562680 UBA1P22314 1058 aaKnown RBP8.05□□□□□ -1.12
TCF4-216ENST00000562680 AXLP30530 894 aa8.05□□□□□ -1.12
TCF4-216ENST00000562680 RNASE9P60153 205 aaKnown RBP8.05□□□□□ -1.12
TCF4-216ENST00000562680 EVX2Q03828 476 aa8.05□□□□□ -1.12
TCF4-216ENST00000562680 AFG1LQ8WV93 481 aa8.05□□□□□ -1.12
TCF4-216ENST00000562680 UBLCP1Q8WVY7 318 aaPredicted RBP8.05□□□□□ -1.12
TCF4-216ENST00000562680 TMEM106CQ9BVX2 250 aa8.05□□□□□ -1.12
TCF4-216ENST00000562680 ASNSD1Q9NWL6 643 aa8.05□□□□□ -1.12
TCF4-216ENST00000562680 ZNF112Q9UJU3 913 aa8.05□□□□□ -1.12
TCF4-216ENST00000562680 STAP1Q9ULZ2 295 aa8.05□□□□□ -1.12
TCF4-216ENST00000562680 GOLGA8SH3BPF8 625 aa8.05□□□□□ -1.12
TCF4-216ENST00000562680 ZBTB17Q13105 803 aa8.05□□□□□ -1.12
TCF4-216ENST00000562680 MAP2K5Q13163 448 aa8.05□□□□□ -1.12
TCF4-216ENST00000562680 ACVR2BQ13705 512 aa8.05□□□□□ -1.12
TCF4-216ENST00000562680 TMCO4Q5TGY1 634 aa8.05□□□□□ -1.12
TCF4-216ENST00000562680 KLHDC7AQ5VTJ3 777 aa8.05□□□□□ -1.12
TCF4-216ENST00000562680 SDCCAG8Q86SQ7 713 aaPredicted RBP8.05□□□□□ -1.12
TCF4-216ENST00000562680 CYP2W1Q8TAV3 490 aa8.05□□□□□ -1.12
TCF4-216ENST00000562680 KIAA1257Q9ULG3 409 aa8.05□□□□□ -1.12
TCF4-216ENST00000562680 N4BP2Q86UW6 1770 aaPredicted RBP8.05□□□□□ -1.12
TCF4-216ENST00000562680 A0A0G2JLL6 359 aaPredicted RBP8.05□□□□□ -1.12
TCF4-216ENST00000562680 TYW5A2RUC4 315 aaKnown RBP8.05□□□□□ -1.12
TCF4-216ENST00000562680 GPR182O15218 404 aa8.05□□□□□ -1.12
TCF4-216ENST00000562680 HLA-DRAP01903 254 aa8.05□□□□□ -1.12
TCF4-216ENST00000562680 SLC12A3P55017 1021 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms