RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 MYBPC3Q14896 1274 aa6.14□□□□□ -1.43
SMG1-206ENST00000562668 ACAP1Q15027 740 aa6.14□□□□□ -1.43
SMG1-206ENST00000562668 GAGE13Q4V321 117 aa6.14□□□□□ -1.43
SMG1-206ENST00000562668 CREB3L3Q68CJ9 461 aa6.14□□□□□ -1.43
SMG1-206ENST00000562668 ESRP1Q6NXG1 681 aaKnown RBP6.14□□□□□ -1.43
SMG1-206ENST00000562668 CLEC14AQ86T13 490 aa6.14□□□□□ -1.43
SMG1-206ENST00000562668 ARHGEF25Q86VW2 580 aa6.14□□□□□ -1.43
SMG1-206ENST00000562668 ANKRD53Q8N9V6 530 aa6.14□□□□□ -1.43
SMG1-206ENST00000562668 RPGRQ92834 1020 aaKnown RBP6.14□□□□□ -1.43
SMG1-206ENST00000562668 RPL10LQ96L21 214 aaKnown RBP6.14□□□□□ -1.43
SMG1-206ENST00000562668 WDR92Q96MX6 357 aa6.14□□□□□ -1.43
SMG1-206ENST00000562668 NPC1L1Q9UHC9 1359 aa6.14□□□□□ -1.43
SMG1-206ENST00000562668 ATRNO75882 1429 aa6.14□□□□□ -1.43
SMG1-206ENST00000562668 SMG6Q86US8 1419 aaKnown RBP6.14□□□□□ -1.43
SMG1-206ENST00000562668 WNK3Q9BYP7 1800 aa6.13□□□□□ -1.43
SMG1-206ENST00000562668 OVOL3O00110 214 aa6.13□□□□□ -1.43
SMG1-206ENST00000562668 ADH4P08319 380 aa6.13□□□□□ -1.43
SMG1-206ENST00000562668 JMJD7P0C870 316 aa6.13□□□□□ -1.43
SMG1-206ENST00000562668 SDSP20132 328 aa6.13□□□□□ -1.43
SMG1-206ENST00000562668 FNDC7Q5VTL7 733 aa6.13□□□□□ -1.43
SMG1-206ENST00000562668 UBE2R2Q712K3 238 aaPredicted RBP6.13□□□□□ -1.43
SMG1-206ENST00000562668 GAREM2Q75VX8 874 aa6.13□□□□□ -1.43
SMG1-206ENST00000562668 C7orf31Q8N865 590 aa6.13□□□□□ -1.43
SMG1-206ENST00000562668 MIEF2Q96C03 454 aa6.13□□□□□ -1.43
SMG1-206ENST00000562668 POLR3GLQ9BT43 218 aa6.13□□□□□ -1.43
SMG1-206ENST00000562668 KANSL2Q9H9L4 492 aa6.13□□□□□ -1.43
SMG1-206ENST00000562668 IL23AQ9NPF7 189 aa6.13□□□□□ -1.43
SMG1-206ENST00000562668 PARPBPQ9NWS1 579 aa6.13□□□□□ -1.43
SMG1-206ENST00000562668 TMEM260Q9NX78 707 aa6.13□□□□□ -1.43
SMG1-206ENST00000562668 DNAI1Q9UI46 699 aa6.13□□□□□ -1.43
SMG1-206ENST00000562668 NSD2O96028 1365 aa6.13□□□□□ -1.43
SMG1-206ENST00000562668 AATKQ6ZMQ8 1374 aa6.13□□□□□ -1.43
SMG1-206ENST00000562668 COL5A2P05997 1499 aaPredicted RBP6.13□□□□□ -1.43
SMG1-206ENST00000562668 FAM208AQ9UK61 1670 aaKnown RBP6.13□□□□□ -1.43
SMG1-206ENST00000562668 RGPD2P0DJD1 1756 aa6.13□□□□□ -1.43
SMG1-206ENST00000562668 GOLGA8BA8MQT2 603 aa6.12□□□□□ -1.43
SMG1-206ENST00000562668 PPP1R12AO14974 1030 aaPredicted RBP6.12□□□□□ -1.43
SMG1-206ENST00000562668 RFPL3O75679 317 aa6.12□□□□□ -1.43
SMG1-206ENST00000562668 TOX4O94842 621 aa6.12□□□□□ -1.43
SMG1-206ENST00000562668 VSIG10L2P0DP72 767 aa6.12□□□□□ -1.43
SMG1-206ENST00000562668 AFF2P51816 1311 aa6.12□□□□□ -1.43
SMG1-206ENST00000562668 ADCY1Q08828 1119 aa6.12□□□□□ -1.43
SMG1-206ENST00000562668 CGNL1Q0VF96 1302 aa6.12□□□□□ -1.43
SMG1-206ENST00000562668 CDCA2Q69YH5 1023 aaPredicted RBP6.12□□□□□ -1.43
SMG1-206ENST00000562668 Q6ZRM9 215 aa6.12□□□□□ -1.43
SMG1-206ENST00000562668 PLA2G15Q8NCC3 412 aa6.12□□□□□ -1.43
SMG1-206ENST00000562668 KCNH5Q8NCM2 988 aa6.12□□□□□ -1.43
SMG1-206ENST00000562668 NEU4Q8WWR8 484 aaPredicted RBP6.12□□□□□ -1.43
SMG1-206ENST00000562668 CHFRQ96EP1 664 aa6.12□□□□□ -1.43
SMG1-206ENST00000562668 ELF4Q99607 663 aaPredicted RBP6.12□□□□□ -1.43
SMG1-206ENST00000562668 WDR33Q9C0J8 1336 aaKnown RBP6.12□□□□□ -1.43
SMG1-206ENST00000562668 PITHD1Q9GZP4 211 aaPredicted RBP6.12□□□□□ -1.43
SMG1-206ENST00000562668 MMRN2Q9H8L6 949 aa6.12□□□□□ -1.43
SMG1-206ENST00000562668 RGPD1P0DJD0 1748 aa6.11□□□□□ -1.43
SMG1-206ENST00000562668 THSD7AQ9UPZ6 1657 aa6.11□□□□□ -1.43
SMG1-206ENST00000562668 MAP3K19Q56UN5 1328 aa6.11□□□□□ -1.43
SMG1-206ENST00000562668 ASMTLO95671 621 aa6.11□□□□□ -1.43
SMG1-206ENST00000562668 SLC9A1P19634 815 aa6.11□□□□□ -1.43
SMG1-206ENST00000562668 MAKP20794 623 aa6.11□□□□□ -1.43
SMG1-206ENST00000562668 SCNN1GP51170 649 aa6.11□□□□□ -1.43
SMG1-206ENST00000562668 DPTQ07507 201 aa6.11□□□□□ -1.43
SMG1-206ENST00000562668 PABPC4Q13310 644 aaKnown RBP eCLIP6.11□□□□□ -1.43
SMG1-206ENST00000562668 ELAVL1Q15717 326 aaKnown RBP6.11□□□□□ -1.43
SMG1-206ENST00000562668 CFAP100Q494V2 611 aa6.11□□□□□ -1.43
SMG1-206ENST00000562668 KRT40Q6A162 431 aa6.11□□□□□ -1.43
SMG1-206ENST00000562668 FAM111BQ6SJ93 734 aa6.11□□□□□ -1.43
SMG1-206ENST00000562668 PHYKPLQ8IUZ5 450 aa6.11□□□□□ -1.43
SMG1-206ENST00000562668 COG3Q96JB2 828 aa6.11□□□□□ -1.43
SMG1-206ENST00000562668 TCF25Q9BQ70 676 aa6.11□□□□□ -1.43
SMG1-206ENST00000562668 ZSWIM4Q9H7M6 989 aa6.11□□□□□ -1.43
SMG1-206ENST00000562668 MAGEC2Q9UBF1 373 aaPredicted RBP6.11□□□□□ -1.43
SMG1-206ENST00000562668 RCAN3Q9UKA8 241 aa6.11□□□□□ -1.43
SMG1-206ENST00000562668 SPO11Q9Y5K1 396 aa6.11□□□□□ -1.43
SMG1-206ENST00000562668 COL3A1P02461 1466 aaPredicted RBP6.1□□□□□ -1.43
SMG1-206ENST00000562668 NCAPD2Q15021 1401 aa6.1□□□□□ -1.43
SMG1-206ENST00000562668 RTL1A6NKG5 1358 aa6.1□□□□□ -1.43
SMG1-206ENST00000562668 KIF24Q5T7B8 1368 aa6.1□□□□□ -1.43
SMG1-206ENST00000562668 UBE2QL1A1L167 161 aa6.1□□□□□ -1.43
SMG1-206ENST00000562668 PEX11BO96011 259 aa6.1□□□□□ -1.43
SMG1-206ENST00000562668 JUNP05412 331 aaKnown RBP6.1□□□□□ -1.43
SMG1-206ENST00000562668 MAN2A2P49641 1150 aa6.1□□□□□ -1.43
SMG1-206ENST00000562668 PURAQ00577 322 aaKnown RBP6.1□□□□□ -1.43
SMG1-206ENST00000562668 ADCY2Q08462 1091 aa6.1□□□□□ -1.43
SMG1-206ENST00000562668 CNGB1Q14028 1251 aaPredicted RBP6.1□□□□□ -1.43
SMG1-206ENST00000562668 KANSL1Q7Z3B3 1105 aa6.1□□□□□ -1.43
SMG1-206ENST00000562668 UNC5CLQ8IV45 518 aa6.1□□□□□ -1.43
SMG1-206ENST00000562668 ORAI3Q9BRQ5 295 aa6.1□□□□□ -1.43
SMG1-206ENST00000562668 MTG2Q9H4K7 406 aa6.1□□□□□ -1.43
SMG1-206ENST00000562668 TOMM22Q9NS69 142 aa6.1□□□□□ -1.43
SMG1-206ENST00000562668 INTS7Q9NVH2 962 aaKnown RBP6.1□□□□□ -1.43
SMG1-206ENST00000562668 OXSMQ9NWU1 459 aa6.1□□□□□ -1.43
SMG1-206ENST00000562668 BRWD3Q6RI45 1802 aa6.1□□□□□ -1.43
SMG1-206ENST00000562668 CDK12Q9NYV4 1490 aaPredicted RBP6.09□□□□□ -1.43
SMG1-206ENST00000562668 BLMP54132 1417 aaPredicted RBP6.09□□□□□ -1.43
SMG1-206ENST00000562668 PARD3Q8TEW0 1356 aa6.09□□□□□ -1.43
SMG1-206ENST00000562668 SHANK3Q9BYB0 1731 aa6.09□□□□□ -1.43
SMG1-206ENST00000562668 PARP4Q9UKK3 1724 aaKnown RBP6.09□□□□□ -1.43
SMG1-206ENST00000562668 A0A0A6YYJ9 748 aa6.09□□□□□ -1.43
SMG1-206ENST00000562668 MAFGO15525 162 aa6.09□□□□□ -1.43
SMG1-206ENST00000562668 HNRNPLP14866 589 aaKnown RBP eCLIP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms