RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 HARSP12081 509 aaKnown RBP17.85■□□□□ 0.45
USB1-206ENST00000562534 PPP1R2P41236 205 aa17.85■□□□□ 0.45
USB1-206ENST00000562534 GATMP50440 423 aa17.85■□□□□ 0.45
USB1-206ENST00000562534 OSTNP61366 133 aa17.85■□□□□ 0.45
USB1-206ENST00000562534 TAP1Q03518 808 aa17.85■□□□□ 0.45
USB1-206ENST00000562534 RNASELQ05823 741 aaKnown RBP17.85■□□□□ 0.45
USB1-206ENST00000562534 PAN2Q504Q3 1202 aaKnown RBP17.85■□□□□ 0.45
USB1-206ENST00000562534 COBLL1Q53SF7 1204 aa17.85■□□□□ 0.45
USB1-206ENST00000562534 PPP2R2DQ66LE6 453 aa17.85■□□□□ 0.45
USB1-206ENST00000562534 ARMCX5Q6P1M9 558 aa17.85■□□□□ 0.45
USB1-206ENST00000562534 TRIML1Q8N9V2 468 aa17.85■□□□□ 0.45
USB1-206ENST00000562534 CLP1Q92989 425 aaKnown RBP17.85■□□□□ 0.45
USB1-206ENST00000562534 FAM193BQ96PV7 902 aaPredicted RBP17.85■□□□□ 0.45
USB1-206ENST00000562534 KIAA1586Q9HCI6 787 aa17.85■□□□□ 0.45
USB1-206ENST00000562534 AAASQ9NRG9 546 aa17.85■□□□□ 0.45
USB1-206ENST00000562534 KLK14Q9P0G3 267 aa17.85■□□□□ 0.45
USB1-206ENST00000562534 MAN1B1Q9UKM7 699 aa17.85■□□□□ 0.45
USB1-206ENST00000562534 INPP5FQ9Y2H2 1132 aa17.85■□□□□ 0.45
USB1-206ENST00000562534 SOX1O00570 391 aaPredicted RBP17.84■□□□□ 0.45
USB1-206ENST00000562534 RECQL4O94761 1208 aa17.84■□□□□ 0.45
USB1-206ENST00000562534 STIM1Q13586 685 aa17.84■□□□□ 0.45
USB1-206ENST00000562534 SPOUT1Q5T280 376 aaKnown RBP17.84■□□□□ 0.45
USB1-206ENST00000562534 ALKAL1Q6UXT8 129 aa17.84■□□□□ 0.45
USB1-206ENST00000562534 LRRC55Q6ZSA7 311 aa17.84■□□□□ 0.45
USB1-206ENST00000562534 CD302Q8IX05 232 aa17.84■□□□□ 0.45
USB1-206ENST00000562534 LRRC43Q8N309 656 aa17.84■□□□□ 0.45
USB1-206ENST00000562534 CEP120Q8N960 986 aa17.84■□□□□ 0.45
USB1-206ENST00000562534 TGS1Q96RS0 853 aaKnown RBP17.84■□□□□ 0.45
USB1-206ENST00000562534 RPS6KC1Q96S38 1066 aa17.84■□□□□ 0.45
USB1-206ENST00000562534 TSPAN18Q96SJ8 248 aa17.84■□□□□ 0.45
USB1-206ENST00000562534 IKZF4Q9H2S9 585 aa17.84■□□□□ 0.45
USB1-206ENST00000562534 ZNF576Q9H609 170 aa17.84■□□□□ 0.45
USB1-206ENST00000562534 RPF1Q9H9Y2 349 aaKnown RBP17.84■□□□□ 0.45
USB1-206ENST00000562534 MAPK8IP1Q9UQF2 711 aa17.84■□□□□ 0.45
USB1-206ENST00000562534 TISP43B9A030 160 aa17.83■□□□□ 0.44
USB1-206ENST00000562534 CALUO43852 315 aaPredicted RBP17.83■□□□□ 0.44
USB1-206ENST00000562534 POMCP01189 267 aa17.83■□□□□ 0.44
USB1-206ENST00000562534 ALDH2P05091 517 aa17.83■□□□□ 0.44
USB1-206ENST00000562534 RB1P06400 928 aa17.83■□□□□ 0.44
USB1-206ENST00000562534 THP07101 528 aa17.83■□□□□ 0.44
USB1-206ENST00000562534 BMPR1AP36894 532 aa17.83■□□□□ 0.44
USB1-206ENST00000562534 MLH1P40692 756 aa17.83■□□□□ 0.44
USB1-206ENST00000562534 PRCPP42785 496 aa17.83■□□□□ 0.44
USB1-206ENST00000562534 ERVK-21P61565 698 aa17.83■□□□□ 0.44
USB1-206ENST00000562534 MORC3Q14149 939 aa17.83■□□□□ 0.44
USB1-206ENST00000562534 MYBPC2Q14324 1141 aa17.83■□□□□ 0.44
USB1-206ENST00000562534 SLC10A6Q3KNW5 377 aa17.83■□□□□ 0.44
USB1-206ENST00000562534 XKR4Q5GH76 650 aa17.83■□□□□ 0.44
USB1-206ENST00000562534 ISM2Q6H9L7 571 aa17.83■□□□□ 0.44
USB1-206ENST00000562534 C12orf56Q8IXR9 622 aa17.83■□□□□ 0.44
USB1-206ENST00000562534 GSTCDQ8NEC7 633 aa17.83■□□□□ 0.44
USB1-206ENST00000562534 TMEM174Q8WUU8 243 aa17.83■□□□□ 0.44
USB1-206ENST00000562534 LRCH3Q96II8 777 aa17.83■□□□□ 0.44
USB1-206ENST00000562534 ZFP42Q96MM3 310 aa17.83■□□□□ 0.44
USB1-206ENST00000562534 KCTD10Q9H3F6 313 aa17.83■□□□□ 0.44
USB1-206ENST00000562534 AGPAT3Q9NRZ7 376 aa17.83■□□□□ 0.44
USB1-206ENST00000562534 TBC1D13Q9NVG8 400 aa17.83■□□□□ 0.44
USB1-206ENST00000562534 MIOSQ9NXC5 875 aa17.83■□□□□ 0.44
USB1-206ENST00000562534 CPSF3Q9UKF6 684 aaKnown RBP17.83■□□□□ 0.44
USB1-206ENST00000562534 PCDHB12Q9Y5F1 795 aa17.83■□□□□ 0.44
USB1-206ENST00000562534 MRPL42Q9Y6G3 142 aaKnown RBP17.83■□□□□ 0.44
USB1-206ENST00000562534 PTPRSQ13332 1948 aa17.82■□□□□ 0.44
USB1-206ENST00000562534 EXTL3O43909 919 aa17.82■□□□□ 0.44
USB1-206ENST00000562534 FAM189A1O60320 539 aa17.82■□□□□ 0.44
USB1-206ENST00000562534 ADRB2P07550 413 aa17.82■□□□□ 0.44
USB1-206ENST00000562534 LAG3P18627 525 aa17.82■□□□□ 0.44
USB1-206ENST00000562534 ALDH7A1P49419 539 aaKnown RBP17.82■□□□□ 0.44
USB1-206ENST00000562534 ACOT2P49753 483 aa17.82■□□□□ 0.44
USB1-206ENST00000562534 AFF1P51825 1210 aaKnown RBP17.82■□□□□ 0.44
USB1-206ENST00000562534 SEZ6Q53EL9 994 aa17.82■□□□□ 0.44
USB1-206ENST00000562534 ZNF697Q5TEC3 545 aa17.82■□□□□ 0.44
USB1-206ENST00000562534 TMEM192Q8IY95 271 aa17.82■□□□□ 0.44
USB1-206ENST00000562534 GPD1LQ8N335 351 aa17.82■□□□□ 0.44
USB1-206ENST00000562534 DHTKD1Q96HY7 919 aaPredicted RBP17.82■□□□□ 0.44
USB1-206ENST00000562534 CBWD1Q9BRT8 395 aa17.82■□□□□ 0.44
USB1-206ENST00000562534 PLVAPQ9BX97 442 aa17.82■□□□□ 0.44
USB1-206ENST00000562534 PCIF1Q9H4Z3 704 aa17.82■□□□□ 0.44
USB1-206ENST00000562534 CWH43Q9H720 699 aa17.82■□□□□ 0.44
USB1-206ENST00000562534 HSPBP1Q9NZL4 362 aa17.82■□□□□ 0.44
USB1-206ENST00000562534 TRAF3IP3Q9Y228 551 aa17.82■□□□□ 0.44
USB1-206ENST00000562534 TRIOBPQ9H2D6 2365 aa17.82■□□□□ 0.44
USB1-206ENST00000562534 SMIM28A0A1B0GU29 152 aa17.81■□□□□ 0.44
USB1-206ENST00000562534 TTC26A0AVF1 554 aa17.81■□□□□ 0.44
USB1-206ENST00000562534 ZNF233A6NK53 670 aa17.81■□□□□ 0.44
USB1-206ENST00000562534 BIN1O00499 593 aa17.81■□□□□ 0.44
USB1-206ENST00000562534 CLIC2O15247 247 aa17.81■□□□□ 0.44
USB1-206ENST00000562534 KCNE1P15382 129 aa17.81■□□□□ 0.44
USB1-206ENST00000562534 RPL13P26373 211 aaKnown RBP17.81■□□□□ 0.44
USB1-206ENST00000562534 TNFSF9P41273 254 aa17.81■□□□□ 0.44
USB1-206ENST00000562534 SCNN1GP51170 649 aa17.81■□□□□ 0.44
USB1-206ENST00000562534 GRIK3Q13003 919 aa17.81■□□□□ 0.44
USB1-206ENST00000562534 SLC9A9Q8IVB4 645 aa17.81■□□□□ 0.44
USB1-206ENST00000562534 SMYD4Q8IYR2 804 aaPredicted RBP17.81■□□□□ 0.44
USB1-206ENST00000562534 ADSSL1Q8N142 457 aa17.81■□□□□ 0.44
USB1-206ENST00000562534 XXYLT1Q8NBI6 393 aa17.81■□□□□ 0.44
USB1-206ENST00000562534 FAM213AQ9BRX8 229 aa17.81■□□□□ 0.44
USB1-206ENST00000562534 SEMA6BQ9H3T3 888 aa17.81■□□□□ 0.44
USB1-206ENST00000562534 ASB7Q9H672 318 aa17.81■□□□□ 0.44
USB1-206ENST00000562534 NRDE2Q9H7Z3 1164 aa17.81■□□□□ 0.44
USB1-206ENST00000562534 SLC38A7Q9NVC3 462 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms