RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 ACLYP53396 1101 aa15.49■□□□□ 0.07
COMMD4-205ENST00000562310 CRYBB1P53674 252 aaPredicted RBP15.49■□□□□ 0.07
COMMD4-205ENST00000562310 DLG4P78352 724 aa15.49■□□□□ 0.07
COMMD4-205ENST00000562310 PPP3CAQ08209 521 aa15.49■□□□□ 0.07
COMMD4-205ENST00000562310 DCAF4L1Q3SXM0 396 aa15.49■□□□□ 0.07
COMMD4-205ENST00000562310 EPC2Q52LR7 807 aa15.49■□□□□ 0.07
COMMD4-205ENST00000562310 FAM47CQ5HY64 1035 aa15.49■□□□□ 0.07
COMMD4-205ENST00000562310 KLHDC7AQ5VTJ3 777 aa15.49■□□□□ 0.07
COMMD4-205ENST00000562310 PDXDC1Q6P996 788 aa15.49■□□□□ 0.07
COMMD4-205ENST00000562310 CRELD2Q6UXH1 353 aaPredicted RBP15.49■□□□□ 0.07
COMMD4-205ENST00000562310 ZBTB33Q86T24 672 aa15.49■□□□□ 0.07
COMMD4-205ENST00000562310 RPAINQ86UA6 219 aa15.49■□□□□ 0.07
COMMD4-205ENST00000562310 ARRDC4Q8NCT1 418 aa15.49■□□□□ 0.07
COMMD4-205ENST00000562310 BAP1Q92560 729 aa15.49■□□□□ 0.07
COMMD4-205ENST00000562310 PPP1R16BQ96T49 567 aa15.49■□□□□ 0.07
COMMD4-205ENST00000562310 CGRRF1Q99675 332 aa15.49■□□□□ 0.07
COMMD4-205ENST00000562310 ADPGKQ9BRR6 497 aa15.49■□□□□ 0.07
COMMD4-205ENST00000562310 SEZ6LQ9BYH1 1024 aa15.49■□□□□ 0.07
COMMD4-205ENST00000562310 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.49■□□□□ 0.07
COMMD4-205ENST00000562310 CDT1Q9H211 546 aa15.49■□□□□ 0.07
COMMD4-205ENST00000562310 PDZD7Q9H5P4 517 aa15.49■□□□□ 0.07
COMMD4-205ENST00000562310 AGPAT5Q9NUQ2 364 aa15.49■□□□□ 0.07
COMMD4-205ENST00000562310 PTPN22Q9Y2R2 807 aa15.49■□□□□ 0.07
COMMD4-205ENST00000562310 COQ4Q9Y3A0 265 aa15.49■□□□□ 0.07
COMMD4-205ENST00000562310 RNF225M0QZC1 329 aaPredicted RBP15.48■□□□□ 0.07
COMMD4-205ENST00000562310 IL18RAPO95256 599 aa15.48■□□□□ 0.07
COMMD4-205ENST00000562310 MYCNP04198 464 aaPredicted RBP15.48■□□□□ 0.07
COMMD4-205ENST00000562310 IQCF3P0C7M6 154 aa15.48■□□□□ 0.07
COMMD4-205ENST00000562310 DLATP10515 647 aaKnown RBP15.48■□□□□ 0.07
COMMD4-205ENST00000562310 UCHL3P15374 230 aa15.48■□□□□ 0.07
COMMD4-205ENST00000562310 ARF4P18085 180 aaPredicted RBP15.48■□□□□ 0.07
COMMD4-205ENST00000562310 SLC9A1P19634 815 aa15.48■□□□□ 0.07
COMMD4-205ENST00000562310 EIF4BP23588 611 aaKnown RBP15.48■□□□□ 0.07
COMMD4-205ENST00000562310 ACOT2P49753 483 aa15.48■□□□□ 0.07
COMMD4-205ENST00000562310 POLR2FP61218 127 aaKnown RBP15.48■□□□□ 0.07
COMMD4-205ENST00000562310 MRPS6P82932 125 aaKnown RBP15.48■□□□□ 0.07
COMMD4-205ENST00000562310 EEF1DP3Q658K8 133 aa15.48■□□□□ 0.07
COMMD4-205ENST00000562310 GDF6Q6KF10 455 aaPredicted RBP15.48■□□□□ 0.07
COMMD4-205ENST00000562310 CATSPER4Q7RTX7 472 aa15.48■□□□□ 0.07
COMMD4-205ENST00000562310 SERINC5Q86VE9 423 aa15.48■□□□□ 0.07
COMMD4-205ENST00000562310 EHBP1Q8NDI1 1231 aa15.48■□□□□ 0.07
COMMD4-205ENST00000562310 GLT1D1Q96MS3 346 aa15.48■□□□□ 0.07
COMMD4-205ENST00000562310 TMEM117Q9H0C3 514 aa15.48■□□□□ 0.07
COMMD4-205ENST00000562310 SIX2Q9NPC8 291 aa15.48■□□□□ 0.07
COMMD4-205ENST00000562310 TSKSQ9UJT2 592 aa15.48■□□□□ 0.07
COMMD4-205ENST00000562310 CPSF3Q9UKF6 684 aaKnown RBP15.48■□□□□ 0.07
COMMD4-205ENST00000562310 PLAGL2Q9UPG8 496 aa15.48■□□□□ 0.07
COMMD4-205ENST00000562310 TRPV2Q9Y5S1 764 aa15.48■□□□□ 0.07
COMMD4-205ENST00000562310 LRRC53A6NM62 1247 aa15.47■□□□□ 0.07
COMMD4-205ENST00000562310 ZC3H11AO75152 810 aaKnown RBP eCLIP15.47■□□□□ 0.07
COMMD4-205ENST00000562310 CLTAP09496 248 aa15.47■□□□□ 0.07
COMMD4-205ENST00000562310 ZNF200P98182 395 aaPredicted RBP15.47■□□□□ 0.07
COMMD4-205ENST00000562310 SNX17Q15036 470 aa15.47■□□□□ 0.07
COMMD4-205ENST00000562310 SFMBT2Q5VUG0 894 aa15.47■□□□□ 0.07
COMMD4-205ENST00000562310 LHX8Q68G74 356 aa15.47■□□□□ 0.07
COMMD4-205ENST00000562310 DPY19L2P1Q6NXN4 242 aa15.47■□□□□ 0.07
COMMD4-205ENST00000562310 RRAGAQ7L523 313 aa15.47■□□□□ 0.07
COMMD4-205ENST00000562310 WDR49Q8IV35 697 aa15.47■□□□□ 0.07
COMMD4-205ENST00000562310 FBXL13Q8NEE6 735 aa15.47■□□□□ 0.07
COMMD4-205ENST00000562310 FAM81BQ96LP2 452 aa15.47■□□□□ 0.07
COMMD4-205ENST00000562310 SPAG5Q96R06 1193 aa15.47■□□□□ 0.07
COMMD4-205ENST00000562310 OSMRQ99650 979 aa15.47■□□□□ 0.07
COMMD4-205ENST00000562310 SPTLC3Q9NUV7 552 aa15.47■□□□□ 0.07
COMMD4-205ENST00000562310 APEX2Q9UBZ4 518 aa15.47■□□□□ 0.07
COMMD4-205ENST00000562310 CITO14578 2027 aa15.46■□□□□ 0.07
COMMD4-205ENST00000562310 A0A1B0GUA9 196 aa15.46■□□□□ 0.07
COMMD4-205ENST00000562310 KBTBD13C9JR72 458 aa15.46■□□□□ 0.07
COMMD4-205ENST00000562310 ZSCAN12O43309 604 aa15.46■□□□□ 0.07
COMMD4-205ENST00000562310 CAND2O75155 1236 aa15.46■□□□□ 0.07
COMMD4-205ENST00000562310 ACTN1P12814 892 aa15.46■□□□□ 0.07
COMMD4-205ENST00000562310 TNNI1P19237 187 aa15.46■□□□□ 0.07
COMMD4-205ENST00000562310 TMEM62Q0P6H9 643 aa15.46■□□□□ 0.07
COMMD4-205ENST00000562310 ITGA7Q13683 1181 aa15.46■□□□□ 0.07
COMMD4-205ENST00000562310 ZBTB41Q5SVQ8 909 aa15.46■□□□□ 0.07
COMMD4-205ENST00000562310 NOTUMQ6P988 496 aa15.46■□□□□ 0.07
COMMD4-205ENST00000562310 C15orf39Q6ZRI6 1047 aa15.46■□□□□ 0.07
COMMD4-205ENST00000562310 CCDC170Q8IYT3 715 aa15.46■□□□□ 0.07
COMMD4-205ENST00000562310 LMO3Q8TAP4 145 aa15.46■□□□□ 0.07
COMMD4-205ENST00000562310 PPP1R13LQ8WUF5 828 aa15.46■□□□□ 0.07
COMMD4-205ENST00000562310 CELF4Q9BZC1 486 aaKnown RBP15.46■□□□□ 0.07
COMMD4-205ENST00000562310 RPF1Q9H9Y2 349 aaKnown RBP15.46■□□□□ 0.07
COMMD4-205ENST00000562310 PDE11AQ9HCR9 933 aa15.46■□□□□ 0.07
COMMD4-205ENST00000562310 NLRC4Q9NPP4 1024 aa15.46■□□□□ 0.07
COMMD4-205ENST00000562310 PHF24Q9UPV7 400 aa15.46■□□□□ 0.07
COMMD4-205ENST00000562310 GINS2Q9Y248 185 aa15.46■□□□□ 0.07
COMMD4-205ENST00000562310 FHOD1Q9Y613 1164 aa15.46■□□□□ 0.07
COMMD4-205ENST00000562310 A0A0U1RQG5 324 aaPredicted RBP15.45■□□□□ 0.06
COMMD4-205ENST00000562310 GOLGA6L9A6NEM1 432 aa15.45■□□□□ 0.06
COMMD4-205ENST00000562310 SOWAHDA6NJG2 315 aa15.45■□□□□ 0.06
COMMD4-205ENST00000562310 CYLC1P35663 651 aaPredicted RBP15.45■□□□□ 0.06
COMMD4-205ENST00000562310 JAM2P57087 298 aa15.45■□□□□ 0.06
COMMD4-205ENST00000562310 PTK7Q13308 1070 aa15.45■□□□□ 0.06
COMMD4-205ENST00000562310 RAPGEF1Q13905 1077 aa15.45■□□□□ 0.06
COMMD4-205ENST00000562310 ASIC2Q16515 512 aa15.45■□□□□ 0.06
COMMD4-205ENST00000562310 PTGISQ16647 500 aa15.45■□□□□ 0.06
COMMD4-205ENST00000562310 ZACNQ401N2 412 aa15.45■□□□□ 0.06
COMMD4-205ENST00000562310 SLC9C1Q4G0N8 1177 aa15.45■□□□□ 0.06
COMMD4-205ENST00000562310 SLC27A1Q6PCB7 646 aa15.45■□□□□ 0.06
COMMD4-205ENST00000562310 SV2AQ7L0J3 742 aa15.45■□□□□ 0.06
COMMD4-205ENST00000562310 THNSL1Q8IYQ7 743 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms