RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 MTMR10Q9NXD2 777 aa14.69□□□□□ -0.06
CDH1-204ENST00000562118 TBC1D7Q9P0N9 293 aa14.69□□□□□ -0.06
CDH1-204ENST00000562118 TISP43B9A030 160 aa14.68□□□□□ -0.06
CDH1-204ENST00000562118 OGTO15294 1046 aa14.68□□□□□ -0.06
CDH1-204ENST00000562118 CLDN3O15551 220 aa14.68□□□□□ -0.06
CDH1-204ENST00000562118 PRPF40AO75400 957 aaKnown RBP14.68□□□□□ -0.06
CDH1-204ENST00000562118 GARTP22102 1010 aa14.68□□□□□ -0.06
CDH1-204ENST00000562118 LIG4P49917 911 aa14.68□□□□□ -0.06
CDH1-204ENST00000562118 KYAT1Q16773 422 aa14.68□□□□□ -0.06
CDH1-204ENST00000562118 EPC2Q52LR7 807 aa14.68□□□□□ -0.06
CDH1-204ENST00000562118 SLFN12LQ6IEE8 588 aa14.68□□□□□ -0.06
CDH1-204ENST00000562118 STXBP4Q6ZWJ1 553 aa14.68□□□□□ -0.06
CDH1-204ENST00000562118 TMEM192Q8IY95 271 aa14.68□□□□□ -0.06
CDH1-204ENST00000562118 SNX27Q96L92 541 aa14.68□□□□□ -0.06
CDH1-204ENST00000562118 GUCD1Q96NT3 240 aa14.68□□□□□ -0.06
CDH1-204ENST00000562118 TYW1Q9NV66 732 aaKnown RBP14.68□□□□□ -0.06
CDH1-204ENST00000562118 MIOSQ9NXC5 875 aa14.68□□□□□ -0.06
CDH1-204ENST00000562118 SNTG2Q9NY99 539 aa14.68□□□□□ -0.06
CDH1-204ENST00000562118 CNTN3Q9P232 1028 aa14.68□□□□□ -0.06
CDH1-204ENST00000562118 KANSL3Q9P2N6 904 aa14.68□□□□□ -0.06
CDH1-204ENST00000562118 HCSTQ9UBK5 93 aa14.68□□□□□ -0.06
CDH1-204ENST00000562118 CPSF3Q9UKF6 684 aaKnown RBP14.68□□□□□ -0.06
CDH1-204ENST00000562118 EXOC7Q9UPT5 735 aa14.68□□□□□ -0.06
CDH1-204ENST00000562118 TTC26A0AVF1 554 aa14.67□□□□□ -0.06
CDH1-204ENST00000562118 H3BNC9 293 aa14.67□□□□□ -0.06
CDH1-204ENST00000562118 PRPF6O94906 941 aaKnown RBP14.67□□□□□ -0.06
CDH1-204ENST00000562118 KCNE1P15382 129 aa14.67□□□□□ -0.06
CDH1-204ENST00000562118 LAG3P18627 525 aa14.67□□□□□ -0.06
CDH1-204ENST00000562118 AKAP5P24588 427 aa14.67□□□□□ -0.06
CDH1-204ENST00000562118 MLH1P40692 756 aa14.67□□□□□ -0.06
CDH1-204ENST00000562118 GRIK3Q13003 919 aa14.67□□□□□ -0.06
CDH1-204ENST00000562118 PNOCQ13519 176 aa14.67□□□□□ -0.06
CDH1-204ENST00000562118 GRIN2CQ14957 1233 aa14.67□□□□□ -0.06
CDH1-204ENST00000562118 CRELD2Q6UXH1 353 aaPredicted RBP14.67□□□□□ -0.06
CDH1-204ENST00000562118 COLGALT2Q8IYK4 626 aa14.67□□□□□ -0.06
CDH1-204ENST00000562118 ABI1Q8IZP0 508 aa14.67□□□□□ -0.06
CDH1-204ENST00000562118 COLGALT1Q8NBJ5 622 aa14.67□□□□□ -0.06
CDH1-204ENST00000562118 FBXL18Q96ME1 805 aa14.67□□□□□ -0.06
CDH1-204ENST00000562118 ZFP42Q96MM3 310 aa14.67□□□□□ -0.06
CDH1-204ENST00000562118 PPP1R10Q96QC0 940 aaKnown RBP14.67□□□□□ -0.06
CDH1-204ENST00000562118 GAD1Q99259 594 aa14.67□□□□□ -0.06
CDH1-204ENST00000562118 TMEM175Q9BSA9 504 aa14.67□□□□□ -0.06
CDH1-204ENST00000562118 CXCL16Q9H2A7 254 aa14.67□□□□□ -0.06
CDH1-204ENST00000562118 KCTD10Q9H3F6 313 aa14.67□□□□□ -0.06
CDH1-204ENST00000562118 NRDE2Q9H7Z3 1164 aa14.67□□□□□ -0.06
CDH1-204ENST00000562118 PLEKHA5Q9HAU0 1116 aa14.67□□□□□ -0.06
CDH1-204ENST00000562118 EXOC1Q9NV70 894 aa14.67□□□□□ -0.06
CDH1-204ENST00000562118 CGNQ9P2M7 1197 aaKnown RBP14.67□□□□□ -0.06
CDH1-204ENST00000562118 PLAGL2Q9UPG8 496 aa14.67□□□□□ -0.06
CDH1-204ENST00000562118 MYO9BQ13459 2157 aa14.67□□□□□ -0.06
CDH1-204ENST00000562118 KIAA0391O15091 583 aaKnown RBP14.66□□□□□ -0.06
CDH1-204ENST00000562118 KINO60870 393 aaKnown RBP14.66□□□□□ -0.06
CDH1-204ENST00000562118 DDHD2O94830 711 aa14.66□□□□□ -0.06
CDH1-204ENST00000562118 CLTAP09496 248 aa14.66□□□□□ -0.06
CDH1-204ENST00000562118 MCCD1P59942 119 aaPredicted RBP14.66□□□□□ -0.06
CDH1-204ENST00000562118 PLCB3Q01970 1234 aa14.66□□□□□ -0.06
CDH1-204ENST00000562118 NFIL3Q16649 462 aa14.66□□□□□ -0.06
CDH1-204ENST00000562118 SLC10A6Q3KNW5 377 aa14.66□□□□□ -0.06
CDH1-204ENST00000562118 PAN2Q504Q3 1202 aaKnown RBP14.66□□□□□ -0.06
CDH1-204ENST00000562118 ZCWPW2Q504Y3 356 aa14.66□□□□□ -0.06
CDH1-204ENST00000562118 Q7L0L9 218 aa14.66□□□□□ -0.06
CDH1-204ENST00000562118 ZNF280BQ86YH2 543 aa14.66□□□□□ -0.06
CDH1-204ENST00000562118 RNF168Q8IYW5 571 aaPredicted RBP14.66□□□□□ -0.06
CDH1-204ENST00000562118 GUF1Q8N442 669 aaKnown RBP14.66□□□□□ -0.06
CDH1-204ENST00000562118 DEFB123Q8N688 67 aa14.66□□□□□ -0.06
CDH1-204ENST00000562118 RNF169Q8NCN4 708 aa14.66□□□□□ -0.06
CDH1-204ENST00000562118 URGCPQ8TCY9 931 aa14.66□□□□□ -0.06
CDH1-204ENST00000562118 BICD1Q96G01 975 aa14.66□□□□□ -0.06
CDH1-204ENST00000562118 TSPAN18Q96SJ8 248 aa14.66□□□□□ -0.06
CDH1-204ENST00000562118 CCDC94Q9BW85 323 aaPredicted RBP14.66□□□□□ -0.06
CDH1-204ENST00000562118 GTPBP4Q9BZE4 634 aaKnown RBP14.66□□□□□ -0.06
CDH1-204ENST00000562118 GBP3Q9H0R5 595 aa14.66□□□□□ -0.06
CDH1-204ENST00000562118 SLC39A2Q9NP94 309 aa14.66□□□□□ -0.06
CDH1-204ENST00000562118 ANKFY1Q9P2R3 1169 aa14.66□□□□□ -0.06
CDH1-204ENST00000562118 PCDHA5Q9Y5H7 936 aa14.66□□□□□ -0.06
CDH1-204ENST00000562118 PRUNE2Q8WUY3 3088 aa14.66□□□□□ -0.06
CDH1-204ENST00000562118 XIRP2A4UGR9 3374 aa14.65□□□□□ -0.06
CDH1-204ENST00000562118 SCNN1GP51170 649 aa14.65□□□□□ -0.06
CDH1-204ENST00000562118 ZBTB6Q15916 424 aa14.65□□□□□ -0.06
CDH1-204ENST00000562118 ENOX2Q16206 610 aaKnown RBP14.65□□□□□ -0.06
CDH1-204ENST00000562118 KNOP1Q1ED39 458 aaKnown RBP14.65□□□□□ -0.06
CDH1-204ENST00000562118 ZBTB41Q5SVQ8 909 aa14.65□□□□□ -0.06
CDH1-204ENST00000562118 ZBTB33Q86T24 672 aa14.65□□□□□ -0.06
CDH1-204ENST00000562118 SLC9A9Q8IVB4 645 aa14.65□□□□□ -0.06
CDH1-204ENST00000562118 SLC39A11Q8N1S5 342 aa14.65□□□□□ -0.06
CDH1-204ENST00000562118 ACAP3Q96P50 834 aa14.65□□□□□ -0.06
CDH1-204ENST00000562118 C11orf84Q9BUA3 381 aaPredicted RBP14.65□□□□□ -0.06
CDH1-204ENST00000562118 AGPAT3Q9NRZ7 376 aa14.65□□□□□ -0.06
CDH1-204ENST00000562118 TOPORSQ9NS56 1045 aaPredicted RBP14.65□□□□□ -0.06
CDH1-204ENST00000562118 DMAC2Q9NW81 257 aa14.65□□□□□ -0.06
CDH1-204ENST00000562118 RMND1Q9NWS8 449 aa14.65□□□□□ -0.06
CDH1-204ENST00000562118 LMCD1Q9NZU5 365 aa14.65□□□□□ -0.06
CDH1-204ENST00000562118 HOOK1Q9UJC3 728 aaKnown RBP14.65□□□□□ -0.06
CDH1-204ENST00000562118 LZTS1Q9Y250 596 aa14.65□□□□□ -0.06
CDH1-204ENST00000562118 SMIM28A0A1B0GU29 152 aa14.64□□□□□ -0.07
CDH1-204ENST00000562118 GALTP07902 379 aa14.64□□□□□ -0.07
CDH1-204ENST00000562118 BMP6P22004 513 aa14.64□□□□□ -0.07
CDH1-204ENST00000562118 CTNNB1P35222 781 aa14.64□□□□□ -0.07
CDH1-204ENST00000562118 PPM1AP35813 382 aa14.64□□□□□ -0.07
CDH1-204ENST00000562118 TNFSF9P41273 254 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms