RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 INTUQ9ULD6 942 aa8.08□□□□□ -1.12
SMG1-204ENST00000561940 CCDC178Q5BJE1 867 aa8.07□□□□□ -1.12
SMG1-204ENST00000561940 SPDYAQ5MJ70 313 aa8.07□□□□□ -1.12
SMG1-204ENST00000561940 PRR18Q8N4B5 295 aa8.07□□□□□ -1.12
SMG1-204ENST00000561940 PPP1R14CQ8TAE6 165 aa8.07□□□□□ -1.12
SMG1-204ENST00000561940 PPP1R35Q8TAP8 253 aa8.07□□□□□ -1.12
SMG1-204ENST00000561940 KAT5Q92993 513 aa8.07□□□□□ -1.12
SMG1-204ENST00000561940 GREM2Q9H772 168 aa8.07□□□□□ -1.12
SMG1-204ENST00000561940 C14orf93Q9H972 538 aaKnown RBP8.07□□□□□ -1.12
SMG1-204ENST00000561940 TSC22D4Q9Y3Q8 395 aa8.07□□□□□ -1.12
SMG1-204ENST00000561940 FRMPD2Q68DX3 1309 aaPredicted RBP8.06□□□□□ -1.12
SMG1-204ENST00000561940 ERC2O15083 957 aa8.06□□□□□ -1.12
SMG1-204ENST00000561940 NRP2O60462 931 aa8.06□□□□□ -1.12
SMG1-204ENST00000561940 PEX14O75381 377 aa8.06□□□□□ -1.12
SMG1-204ENST00000561940 JUNP05412 331 aaKnown RBP8.06□□□□□ -1.12
SMG1-204ENST00000561940 IL10RAQ13651 578 aa8.06□□□□□ -1.12
SMG1-204ENST00000561940 R3HDM1Q15032 1099 aaKnown RBP8.06□□□□□ -1.12
SMG1-204ENST00000561940 PRKD1Q15139 912 aaPredicted RBP8.06□□□□□ -1.12
SMG1-204ENST00000561940 LMBR1LQ6UX01 489 aa8.06□□□□□ -1.12
SMG1-204ENST00000561940 RIN2Q8WYP3 895 aaPredicted RBP8.06□□□□□ -1.12
SMG1-204ENST00000561940 MVB12AQ96EY5 273 aa8.06□□□□□ -1.12
SMG1-204ENST00000561940 CDK5RAP1Q96SZ6 601 aaKnown RBP8.06□□□□□ -1.12
SMG1-204ENST00000561940 TCF25Q9BQ70 676 aa8.06□□□□□ -1.12
SMG1-204ENST00000561940 ADI1Q9BV57 179 aa8.06□□□□□ -1.12
SMG1-204ENST00000561940 KRTAP9-3Q9BYQ3 159 aa8.06□□□□□ -1.12
SMG1-204ENST00000561940 IL23AQ9NPF7 189 aa8.06□□□□□ -1.12
SMG1-204ENST00000561940 TLR9Q9NR96 1032 aa8.06□□□□□ -1.12
SMG1-204ENST00000561940 SH3BP1Q9Y3L3 701 aa8.06□□□□□ -1.12
SMG1-204ENST00000561940 CTNND1O60716 968 aaKnown RBP8.05□□□□□ -1.12
SMG1-204ENST00000561940 ALDH1A2O94788 518 aa8.05□□□□□ -1.12
SMG1-204ENST00000561940 MYL1P05976 194 aa8.05□□□□□ -1.12
SMG1-204ENST00000561940 GSPT1P15170 499 aaKnown RBP8.05□□□□□ -1.12
SMG1-204ENST00000561940 HIBADHP31937 336 aaKnown RBP8.05□□□□□ -1.12
SMG1-204ENST00000561940 NRG3P56975 720 aa8.05□□□□□ -1.12
SMG1-204ENST00000561940 SEPT2Q15019 361 aa8.05□□□□□ -1.12
SMG1-204ENST00000561940 FAM111BQ6SJ93 734 aa8.05□□□□□ -1.12
SMG1-204ENST00000561940 ABHD15Q6UXT9 468 aa8.05□□□□□ -1.12
SMG1-204ENST00000561940 MAP3K14Q99558 947 aa8.05□□□□□ -1.12
SMG1-204ENST00000561940 A0A1W2PR48 441 aa8.04□□□□□ -1.12
SMG1-204ENST00000561940 PMS2P1A4D2B8 440 aa8.04□□□□□ -1.12
SMG1-204ENST00000561940 NOMO1Q15155 1222 aa8.04□□□□□ -1.12
SMG1-204ENST00000561940 PGS1Q32NB8 556 aa8.04□□□□□ -1.12
SMG1-204ENST00000561940 GAGE13Q4V321 117 aa8.04□□□□□ -1.12
SMG1-204ENST00000561940 MAMDC4Q6UXC1 1216 aa8.04□□□□□ -1.12
SMG1-204ENST00000561940 OVCH2Q7RTZ1 564 aa8.04□□□□□ -1.12
SMG1-204ENST00000561940 CCAR1Q8IX12 1150 aaKnown RBP8.04□□□□□ -1.12
SMG1-204ENST00000561940 CMTM4Q8IZR5 234 aa8.04□□□□□ -1.12
SMG1-204ENST00000561940 MSL3Q8N5Y2 521 aaKnown RBP8.04□□□□□ -1.12
SMG1-204ENST00000561940 RAB24Q969Q5 203 aa8.04□□□□□ -1.12
SMG1-204ENST00000561940 ARL8AQ96BM9 186 aa8.04□□□□□ -1.12
SMG1-204ENST00000561940 FAM89AQ96GI7 184 aa8.04□□□□□ -1.12
SMG1-204ENST00000561940 HECAQ9UBI9 543 aaPredicted RBP8.04□□□□□ -1.12
SMG1-204ENST00000561940 CAPN14A8MX76 684 aa8.03□□□□□ -1.12
SMG1-204ENST00000561940 STC2O76061 302 aa8.03□□□□□ -1.12
SMG1-204ENST00000561940 CTSSP25774 331 aa8.03□□□□□ -1.12
SMG1-204ENST00000561940 HHEXQ03014 270 aa8.03□□□□□ -1.12
SMG1-204ENST00000561940 MGAT2Q10469 447 aa8.03□□□□□ -1.12
SMG1-204ENST00000561940 UBE3CQ15386 1083 aa8.03□□□□□ -1.12
SMG1-204ENST00000561940 SYCP2LQ5T4T6 812 aa8.03□□□□□ -1.12
SMG1-204ENST00000561940 SPTY2D1Q68D10 685 aaPredicted RBP8.03□□□□□ -1.12
SMG1-204ENST00000561940 CYB5RLQ6IPT4 315 aa8.03□□□□□ -1.12
SMG1-204ENST00000561940 UNC5BQ8IZJ1 945 aa8.03□□□□□ -1.12
SMG1-204ENST00000561940 OR5M3Q8NGP4 307 aa8.03□□□□□ -1.12
SMG1-204ENST00000561940 HOXB13Q92826 284 aaPredicted RBP8.03□□□□□ -1.12
SMG1-204ENST00000561940 EDAQ92838 391 aa8.03□□□□□ -1.12
SMG1-204ENST00000561940 EXTL1Q92935 676 aa8.03□□□□□ -1.12
SMG1-204ENST00000561940 KRTAP4-5Q9BYR2 181 aa8.03□□□□□ -1.12
SMG1-204ENST00000561940 C1orf112Q9NSG2 853 aa8.03□□□□□ -1.12
SMG1-204ENST00000561940 RBM12Q9NTZ6 932 aaKnown RBP8.03□□□□□ -1.12
SMG1-204ENST00000561940 FAM50BQ9Y247 325 aa8.03□□□□□ -1.12
SMG1-204ENST00000561940 PCDHA13Q9Y5I0 950 aa8.03□□□□□ -1.12
SMG1-204ENST00000561940 PLSCR1O15162 318 aa8.02□□□□□ -1.13
SMG1-204ENST00000561940 PRAMEF4O60810 478 aa8.02□□□□□ -1.13
SMG1-204ENST00000561940 ALDH2P05091 517 aa8.02□□□□□ -1.13
SMG1-204ENST00000561940 ADSLP30566 484 aaPredicted RBP8.02□□□□□ -1.13
SMG1-204ENST00000561940 CASRP41180 1078 aa8.02□□□□□ -1.13
SMG1-204ENST00000561940 WASP42768 502 aa8.02□□□□□ -1.13
SMG1-204ENST00000561940 USP14P54578 494 aa8.02□□□□□ -1.13
SMG1-204ENST00000561940 NPEPPSP55786 919 aa8.02□□□□□ -1.13
SMG1-204ENST00000561940 RHBDL3P58872 404 aa8.02□□□□□ -1.13
SMG1-204ENST00000561940 HLTFQ14527 1009 aaKnown RBP eCLIP8.02□□□□□ -1.13
SMG1-204ENST00000561940 LLGL1Q15334 1064 aa8.02□□□□□ -1.13
SMG1-204ENST00000561940 FAM214AQ32MH5 1076 aa8.02□□□□□ -1.13
SMG1-204ENST00000561940 NRN1LQ496H8 165 aa8.02□□□□□ -1.13
SMG1-204ENST00000561940 USP39Q53GS9 565 aaKnown RBP8.02□□□□□ -1.13
SMG1-204ENST00000561940 PPP4R4Q6NUP7 873 aa8.02□□□□□ -1.13
SMG1-204ENST00000561940 DBX2Q6ZNG2 339 aa8.02□□□□□ -1.13
SMG1-204ENST00000561940 CAMKK1Q8N5S9 505 aa8.02□□□□□ -1.13
SMG1-204ENST00000561940 EPC1Q9H2F5 836 aa8.02□□□□□ -1.13
SMG1-204ENST00000561940 AKR1B10O60218 316 aa8.01□□□□□ -1.13
SMG1-204ENST00000561940 DTNBO60941 627 aa8.01□□□□□ -1.13
SMG1-204ENST00000561940 UBE4AQ14139 1066 aa8.01□□□□□ -1.13
SMG1-204ENST00000561940 ELAVL1Q15717 326 aaKnown RBP8.01□□□□□ -1.13
SMG1-204ENST00000561940 FKBP15Q5T1M5 1219 aa8.01□□□□□ -1.13
SMG1-204ENST00000561940 Q6ZVL8 140 aa8.01□□□□□ -1.13
SMG1-204ENST00000561940 MIGA2Q7L4E1 593 aa8.01□□□□□ -1.13
SMG1-204ENST00000561940 TAS1R1Q7RTX1 841 aa8.01□□□□□ -1.13
SMG1-204ENST00000561940 ELOA2Q8IYF1 753 aaPredicted RBP8.01□□□□□ -1.13
SMG1-204ENST00000561940 GPR156Q8NFN8 814 aa8.01□□□□□ -1.13
SMG1-204ENST00000561940 SARGQ9BW04 601 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms