RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 EYA4O95677 639 aa13.94□□□□□ -0.18
CSPG4P11-201ENST00000560634 CYP2C19P33261 490 aa13.94□□□□□ -0.18
CSPG4P11-201ENST00000560634 CCDC92Q53HC0 331 aaPredicted RBP13.94□□□□□ -0.18
CSPG4P11-201ENST00000560634 HAUS6Q7Z4H7 955 aa13.94□□□□□ -0.18
CSPG4P11-201ENST00000560634 DDIASQ8IXT1 998 aa13.94□□□□□ -0.18
CSPG4P11-201ENST00000560634 MASTLQ96GX5 879 aa13.94□□□□□ -0.18
CSPG4P11-201ENST00000560634 POTEFA5A3E0 1075 aa13.94□□□□□ -0.18
CSPG4P11-201ENST00000560634 TCP11X1B4DZS4 312 aa13.94□□□□□ -0.18
CSPG4P11-201ENST00000560634 NEMP1O14524 444 aa13.94□□□□□ -0.18
CSPG4P11-201ENST00000560634 ORC4O43929 436 aa13.94□□□□□ -0.18
CSPG4P11-201ENST00000560634 POTEIP0CG38 1075 aa13.94□□□□□ -0.18
CSPG4P11-201ENST00000560634 CRKP46108 304 aa13.94□□□□□ -0.18
CSPG4P11-201ENST00000560634 GUCY1A3Q02108 690 aa13.94□□□□□ -0.18
CSPG4P11-201ENST00000560634 POTEGQ6S5H5 508 aa13.94□□□□□ -0.18
CSPG4P11-201ENST00000560634 SHC4Q6S5L8 630 aa13.94□□□□□ -0.18
CSPG4P11-201ENST00000560634 POTEEQ6S8J3 1075 aa13.94□□□□□ -0.18
CSPG4P11-201ENST00000560634 TEKT4Q8WW24 435 aa13.94□□□□□ -0.18
CSPG4P11-201ENST00000560634 CMTM5Q96DZ9 223 aa13.94□□□□□ -0.18
CSPG4P11-201ENST00000560634 TNIP3Q96KP6 325 aa13.94□□□□□ -0.18
CSPG4P11-201ENST00000560634 CASS4Q9NQ75 786 aa13.94□□□□□ -0.18
CSPG4P11-201ENST00000560634 RNF146Q9NTX7 359 aa13.94□□□□□ -0.18
CSPG4P11-201ENST00000560634 CDK12Q9NYV4 1490 aaPredicted RBP13.94□□□□□ -0.18
CSPG4P11-201ENST00000560634 USP27XA6NNY8 438 aa13.94□□□□□ -0.18
CSPG4P11-201ENST00000560634 USP17L10C9JJH3 530 aa13.94□□□□□ -0.18
CSPG4P11-201ENST00000560634 SLC26A4O43511 780 aa13.94□□□□□ -0.18
CSPG4P11-201ENST00000560634 SPAG6O75602 509 aa13.94□□□□□ -0.18
CSPG4P11-201ENST00000560634 CYP2D6P10635 497 aa13.94□□□□□ -0.18
CSPG4P11-201ENST00000560634 EIF3EP60228 445 aaKnown RBP13.94□□□□□ -0.18
CSPG4P11-201ENST00000560634 KLC1Q07866 573 aa13.94□□□□□ -0.18
CSPG4P11-201ENST00000560634 AGBL2Q5U5Z8 902 aa13.94□□□□□ -0.18
CSPG4P11-201ENST00000560634 RHPN2Q8IUC4 686 aa13.94□□□□□ -0.18
CSPG4P11-201ENST00000560634 RMDN2Q96LZ7 410 aa13.94□□□□□ -0.18
CSPG4P11-201ENST00000560634 CCT8L2Q96SF2 557 aa13.94□□□□□ -0.18
CSPG4P11-201ENST00000560634 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.94□□□□□ -0.18
CSPG4P11-201ENST00000560634 GABBR1Q9UBS5 961 aa13.94□□□□□ -0.18
CSPG4P11-201ENST00000560634 AGO2Q9UKV8 859 aaKnown RBP13.94□□□□□ -0.18
CSPG4P11-201ENST00000560634 ITIH6Q6UXX5 1313 aa13.94□□□□□ -0.18
CSPG4P11-201ENST00000560634 CDHR2Q9BYE9 1310 aa13.94□□□□□ -0.18
CSPG4P11-201ENST00000560634 SYNMO15061 1565 aa13.93□□□□□ -0.18
CSPG4P11-201ENST00000560634 CDK17Q00537 523 aa13.93□□□□□ -0.18
CSPG4P11-201ENST00000560634 POTEAQ6S8J7 498 aa13.93□□□□□ -0.18
CSPG4P11-201ENST00000560634 SRLQ86TD4 932 aa13.93□□□□□ -0.18
CSPG4P11-201ENST00000560634 SH3TC2Q8TF17 1288 aa13.93□□□□□ -0.18
CSPG4P11-201ENST00000560634 CEP95Q96GE4 821 aa13.93□□□□□ -0.18
CSPG4P11-201ENST00000560634 LRRC1Q9BTT6 524 aa13.93□□□□□ -0.18
CSPG4P11-201ENST00000560634 NCAPD2Q15021 1401 aa13.93□□□□□ -0.18
CSPG4P11-201ENST00000560634 A8MXQ7 604 aa13.93□□□□□ -0.18
CSPG4P11-201ENST00000560634 HNRNPCP07910 306 aaKnown RBP eCLIP13.93□□□□□ -0.18
CSPG4P11-201ENST00000560634 SNAP25P60880 206 aa13.93□□□□□ -0.18
CSPG4P11-201ENST00000560634 IRX1P78414 480 aaPredicted RBP13.93□□□□□ -0.18
CSPG4P11-201ENST00000560634 TTLL4Q14679 1199 aa13.93□□□□□ -0.18
CSPG4P11-201ENST00000560634 NEDD1Q8NHV4 660 aa13.93□□□□□ -0.18
CSPG4P11-201ENST00000560634 LXNQ9BS40 222 aa13.93□□□□□ -0.18
CSPG4P11-201ENST00000560634 STK33Q9BYT3 514 aa13.93□□□□□ -0.18
CSPG4P11-201ENST00000560634 CCDC134Q9H6E4 229 aa13.93□□□□□ -0.18
CSPG4P11-201ENST00000560634 TUFT1Q9NNX1 390 aa13.93□□□□□ -0.18
CSPG4P11-201ENST00000560634 DDX28Q9NUL7 540 aaKnown RBP13.93□□□□□ -0.18
CSPG4P11-201ENST00000560634 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.93□□□□□ -0.18
CSPG4P11-201ENST00000560634 A0A1B0GTH6 734 aa13.93□□□□□ -0.18
CSPG4P11-201ENST00000560634 ZSCAN9O15535 394 aaPredicted RBP13.93□□□□□ -0.18
CSPG4P11-201ENST00000560634 PRDX5P30044 214 aa13.93□□□□□ -0.18
CSPG4P11-201ENST00000560634 LAMB3Q13751 1172 aa13.93□□□□□ -0.18
CSPG4P11-201ENST00000560634 KRT72Q14CN4 511 aa13.93□□□□□ -0.18
CSPG4P11-201ENST00000560634 QRICH1Q2TAL8 776 aa13.93□□□□□ -0.18
CSPG4P11-201ENST00000560634 PIGBQ92521 554 aa13.93□□□□□ -0.18
CSPG4P11-201ENST00000560634 WDR24Q96S15 920 aa13.93□□□□□ -0.18
CSPG4P11-201ENST00000560634 STXBP3O00186 592 aa13.93□□□□□ -0.18
CSPG4P11-201ENST00000560634 KLHL2O95198 593 aa13.93□□□□□ -0.18
CSPG4P11-201ENST00000560634 STX3Q13277 289 aa13.93□□□□□ -0.18
CSPG4P11-201ENST00000560634 SNRNP48Q6IEG0 339 aaKnown RBP13.93□□□□□ -0.18
CSPG4P11-201ENST00000560634 ROPN1BQ9BZX4 212 aaPredicted RBP13.93□□□□□ -0.18
CSPG4P11-201ENST00000560634 ROPN1Q9HAT0 212 aaPredicted RBP13.93□□□□□ -0.18
CSPG4P11-201ENST00000560634 FAM217BQ9NTX9 383 aaPredicted RBP13.93□□□□□ -0.18
CSPG4P11-201ENST00000560634 UBA6A0AVT1 1052 aaPredicted RBP13.92□□□□□ -0.18
CSPG4P11-201ENST00000560634 EIF3HO15372 352 aaKnown RBP eCLIP13.92□□□□□ -0.18
CSPG4P11-201ENST00000560634 COPB2P35606 906 aa13.92□□□□□ -0.18
CSPG4P11-201ENST00000560634 SWSAP1Q6NVH7 229 aa13.92□□□□□ -0.18
CSPG4P11-201ENST00000560634 CATSPER3Q86XQ3 398 aa13.92□□□□□ -0.18
CSPG4P11-201ENST00000560634 ELMOD1Q8N336 334 aa13.92□□□□□ -0.18
CSPG4P11-201ENST00000560634 TTLL6Q8N841 843 aa13.92□□□□□ -0.18
CSPG4P11-201ENST00000560634 TSPAN17Q96FV3 270 aa13.92□□□□□ -0.18
CSPG4P11-201ENST00000560634 POLR3FQ9H1D9 316 aaPredicted RBP13.92□□□□□ -0.18
CSPG4P11-201ENST00000560634 PCDHA10Q9Y5I2 948 aa13.92□□□□□ -0.18
CSPG4P11-201ENST00000560634 GCC2Q8IWJ2 1684 aa13.92□□□□□ -0.18
CSPG4P11-201ENST00000560634 F5H6K3 240 aa13.92□□□□□ -0.18
CSPG4P11-201ENST00000560634 PHF2O75151 1096 aa13.92□□□□□ -0.18
CSPG4P11-201ENST00000560634 RPS6KA4O75676 772 aa13.92□□□□□ -0.18
CSPG4P11-201ENST00000560634 IGKV5-2P06315 115 aa13.92□□□□□ -0.18
CSPG4P11-201ENST00000560634 TRIM49P0CI25 452 aa13.92□□□□□ -0.18
CSPG4P11-201ENST00000560634 TRIM49CP0CI26 452 aa13.92□□□□□ -0.18
CSPG4P11-201ENST00000560634 KLRC3Q07444 240 aa13.92□□□□□ -0.18
CSPG4P11-201ENST00000560634 ZNF235Q14590 738 aa13.92□□□□□ -0.18
CSPG4P11-201ENST00000560634 CCNI2Q6ZMN8 369 aaPredicted RBP13.92□□□□□ -0.18
CSPG4P11-201ENST00000560634 RASGRP2Q7LDG7 609 aa13.92□□□□□ -0.18
CSPG4P11-201ENST00000560634 ZNF473Q8WTR7 871 aaKnown RBP13.92□□□□□ -0.18
CSPG4P11-201ENST00000560634 KRT35Q92764 455 aa13.92□□□□□ -0.18
CSPG4P11-201ENST00000560634 C18orf8Q96DM3 657 aa13.92□□□□□ -0.18
CSPG4P11-201ENST00000560634 EIF2AK1Q9BQI3 630 aaKnown RBP13.92□□□□□ -0.18
CSPG4P11-201ENST00000560634 SPON2Q9BUD6 331 aa13.92□□□□□ -0.18
CSPG4P11-201ENST00000560634 TSSK1BQ9BXA7 367 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms