RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 USP11P51784 963 aa10□□□□□ -0.81
RABGGTA-217ENST00000560521 NRLP54845 237 aa10□□□□□ -0.81
RABGGTA-217ENST00000560521 NPEPPSP55786 919 aa10□□□□□ -0.81
RABGGTA-217ENST00000560521 PPM1LQ5SGD2 360 aa10□□□□□ -0.81
RABGGTA-217ENST00000560521 NPAS3Q8IXF0 933 aa10□□□□□ -0.81
RABGGTA-217ENST00000560521 LNX1Q8TBB1 728 aaPredicted RBP10□□□□□ -0.81
RABGGTA-217ENST00000560521 TMEM143Q96AN5 459 aa10□□□□□ -0.81
RABGGTA-217ENST00000560521 CPB2Q96IY4 423 aa10□□□□□ -0.81
RABGGTA-217ENST00000560521 TCEANC2Q96MN5 208 aa10□□□□□ -0.81
RABGGTA-217ENST00000560521 PAAF1Q9BRP4 392 aa10□□□□□ -0.81
RABGGTA-217ENST00000560521 CHRDQ9H2X0 955 aa10□□□□□ -0.81
RABGGTA-217ENST00000560521 SH2B1Q9NRF2 756 aaPredicted RBP10□□□□□ -0.81
RABGGTA-217ENST00000560521 CACNG4Q9UBN1 327 aa10□□□□□ -0.81
RABGGTA-217ENST00000560521 POLIQ9UNA4 740 aa10□□□□□ -0.81
RABGGTA-217ENST00000560521 MRPS17Q9Y2R5 130 aaKnown RBP10□□□□□ -0.81
RABGGTA-217ENST00000560521 CITO14578 2027 aa10□□□□□ -0.81
RABGGTA-217ENST00000560521 WDFY3Q8IZQ1 3526 aa9.99□□□□□ -0.81
RABGGTA-217ENST00000560521 GOLGA8AA7E2F4 631 aa9.99□□□□□ -0.81
RABGGTA-217ENST00000560521 GOLGA8BA8MQT2 603 aa9.99□□□□□ -0.81
RABGGTA-217ENST00000560521 TM4SF5O14894 197 aa9.99□□□□□ -0.81
RABGGTA-217ENST00000560521 ADAM12O43184 909 aa9.99□□□□□ -0.81
RABGGTA-217ENST00000560521 HRO43593 1189 aa9.99□□□□□ -0.81
RABGGTA-217ENST00000560521 TADA2AO75478 443 aa9.99□□□□□ -0.81
RABGGTA-217ENST00000560521 GNA11P29992 359 aa9.99□□□□□ -0.81
RABGGTA-217ENST00000560521 HOXA9P31269 272 aa9.99□□□□□ -0.81
RABGGTA-217ENST00000560521 SHC2P98077 582 aa9.99□□□□□ -0.81
RABGGTA-217ENST00000560521 CREMQ03060 361 aa9.99□□□□□ -0.81
RABGGTA-217ENST00000560521 LAMTOR4Q0VGL1 99 aa9.99□□□□□ -0.81
RABGGTA-217ENST00000560521 SIM2Q14190 667 aaPredicted RBP9.99□□□□□ -0.81
RABGGTA-217ENST00000560521 Q4G0T1 1027 aa9.99□□□□□ -0.81
RABGGTA-217ENST00000560521 TANGO2Q6ICL3 276 aa9.99□□□□□ -0.81
RABGGTA-217ENST00000560521 ING5Q8WYH8 240 aa9.99□□□□□ -0.81
RABGGTA-217ENST00000560521 MCRS1Q96EZ8 462 aa9.99□□□□□ -0.81
RABGGTA-217ENST00000560521 JPH2Q9BR39 696 aaPredicted RBP9.99□□□□□ -0.81
RABGGTA-217ENST00000560521 APOL6Q9BWW8 343 aa9.99□□□□□ -0.81
RABGGTA-217ENST00000560521 DHX33Q9H6R0 707 aaKnown RBP9.99□□□□□ -0.81
RABGGTA-217ENST00000560521 NDRG2Q9UN36 371 aaKnown RBP9.99□□□□□ -0.81
RABGGTA-217ENST00000560521 GIT1Q9Y2X7 761 aa9.99□□□□□ -0.81
RABGGTA-217ENST00000560521 MYO16Q9Y6X6 1858 aa9.99□□□□□ -0.81
RABGGTA-217ENST00000560521 ANK1P16157 1881 aa9.98□□□□□ -0.81
RABGGTA-217ENST00000560521 NUP210Q8TEM1 1887 aaPredicted RBP9.98□□□□□ -0.81
RABGGTA-217ENST00000560521 THADAQ6YHU6 1953 aa9.98□□□□□ -0.81
RABGGTA-217ENST00000560521 EML1O00423 815 aa9.98□□□□□ -0.81
RABGGTA-217ENST00000560521 NRG2O14511 850 aaPredicted RBP9.98□□□□□ -0.81
RABGGTA-217ENST00000560521 TSPAN1O60635 241 aa9.98□□□□□ -0.81
RABGGTA-217ENST00000560521 XYLBO75191 536 aa9.98□□□□□ -0.81
RABGGTA-217ENST00000560521 POU2F2P09086 479 aa9.98□□□□□ -0.81
RABGGTA-217ENST00000560521 KCNA4P22459 653 aa9.98□□□□□ -0.81
RABGGTA-217ENST00000560521 AKAP5P24588 427 aa9.98□□□□□ -0.81
RABGGTA-217ENST00000560521 AXLP30530 894 aa9.98□□□□□ -0.81
RABGGTA-217ENST00000560521 PSMC5P62195 406 aa9.98□□□□□ -0.81
RABGGTA-217ENST00000560521 SATB1Q01826 763 aa9.98□□□□□ -0.81
RABGGTA-217ENST00000560521 DMWDQ09019 674 aa9.98□□□□□ -0.81
RABGGTA-217ENST00000560521 SRSF5Q13243 272 aaKnown RBP9.98□□□□□ -0.81
RABGGTA-217ENST00000560521 PSMD5Q16401 504 aa9.98□□□□□ -0.81
RABGGTA-217ENST00000560521 SLC5A9Q2M3M2 681 aa9.98□□□□□ -0.81
RABGGTA-217ENST00000560521 UVSSAQ2YD98 709 aa9.98□□□□□ -0.81
RABGGTA-217ENST00000560521 PABPC1LQ4VXU2 614 aaKnown RBP9.98□□□□□ -0.81
RABGGTA-217ENST00000560521 AXDND1Q5T1B0 1012 aaPredicted RBP9.98□□□□□ -0.81
RABGGTA-217ENST00000560521 LIN9Q5TKA1 542 aa9.98□□□□□ -0.81
RABGGTA-217ENST00000560521 FERMT3Q86UX7 667 aa9.98□□□□□ -0.81
RABGGTA-217ENST00000560521 RNF149Q8NC42 400 aa9.98□□□□□ -0.81
RABGGTA-217ENST00000560521 SLC7A14Q8TBB6 771 aa9.98□□□□□ -0.81
RABGGTA-217ENST00000560521 CCDC12Q8WUD4 166 aaPredicted RBP9.98□□□□□ -0.81
RABGGTA-217ENST00000560521 PIK3R5Q8WYR1 880 aa9.98□□□□□ -0.81
RABGGTA-217ENST00000560521 DDX1Q92499 740 aaKnown RBP9.98□□□□□ -0.81
RABGGTA-217ENST00000560521 TTPALQ9BTX7 342 aa9.98□□□□□ -0.81
RABGGTA-217ENST00000560521 CSRNP2Q9H175 543 aa9.98□□□□□ -0.81
RABGGTA-217ENST00000560521 NXF3Q9H4D5 531 aaKnown RBP9.98□□□□□ -0.81
RABGGTA-217ENST00000560521 LMAN1LQ9HAT1 526 aa9.98□□□□□ -0.81
RABGGTA-217ENST00000560521 BMP2KQ9NSY1 1161 aaPredicted RBP9.98□□□□□ -0.81
RABGGTA-217ENST00000560521 KCNH3Q9ULD8 1083 aa9.98□□□□□ -0.81
RABGGTA-217ENST00000560521 LAMA1P25391 3075 aa9.97□□□□□ -0.81
RABGGTA-217ENST00000560521 KLF18A0A0U1RQI7 1052 aa9.97□□□□□ -0.81
RABGGTA-217ENST00000560521 CHURC1-FNTBB4DL54 471 aa9.97□□□□□ -0.81
RABGGTA-217ENST00000560521 MAN2B1O00754 1011 aa9.97□□□□□ -0.81
RABGGTA-217ENST00000560521 ASAP2O43150 1006 aa9.97□□□□□ -0.81
RABGGTA-217ENST00000560521 PRPF3O43395 683 aaKnown RBP9.97□□□□□ -0.81
RABGGTA-217ENST00000560521 ERLIN2O94905 339 aa9.97□□□□□ -0.81
RABGGTA-217ENST00000560521 PROS1P07225 676 aa9.97□□□□□ -0.81
RABGGTA-217ENST00000560521 FNTBP49356 437 aa9.97□□□□□ -0.81
RABGGTA-217ENST00000560521 CCR3P51677 355 aa9.97□□□□□ -0.81
RABGGTA-217ENST00000560521 PTENP60484 403 aa9.97□□□□□ -0.81
RABGGTA-217ENST00000560521 GRIK3Q13003 919 aa9.97□□□□□ -0.81
RABGGTA-217ENST00000560521 GAS6Q14393 721 aa9.97□□□□□ -0.81
RABGGTA-217ENST00000560521 HSP90AA2PQ14568 343 aaPredicted RBP9.97□□□□□ -0.81
RABGGTA-217ENST00000560521 PPP2R5DQ14738 602 aa9.97□□□□□ -0.81
RABGGTA-217ENST00000560521 FAM171A1Q5VUB5 890 aa9.97□□□□□ -0.81
RABGGTA-217ENST00000560521 NOTUMQ6P988 496 aa9.97□□□□□ -0.81
RABGGTA-217ENST00000560521 CEP57Q86XR8 500 aa9.97□□□□□ -0.81
RABGGTA-217ENST00000560521 HASPINQ8TF76 798 aa9.97□□□□□ -0.81
RABGGTA-217ENST00000560521 PSPC1Q8WXF1 523 aaKnown RBP9.97□□□□□ -0.81
RABGGTA-217ENST00000560521 SLC7A3Q8WY07 619 aa9.97□□□□□ -0.81
RABGGTA-217ENST00000560521 DNASE1L2Q92874 299 aa9.97□□□□□ -0.81
RABGGTA-217ENST00000560521 ELSPBP1Q96BH3 223 aa9.97□□□□□ -0.81
RABGGTA-217ENST00000560521 CEP170P1Q96L14 293 aa9.97□□□□□ -0.81
RABGGTA-217ENST00000560521 GDE1Q9NZC3 331 aa9.97□□□□□ -0.81
RABGGTA-217ENST00000560521 KLK14Q9P0G3 267 aa9.97□□□□□ -0.81
RABGGTA-217ENST00000560521 WRAP73Q9P2S5 460 aaPredicted RBP9.97□□□□□ -0.81
RABGGTA-217ENST00000560521 MRPS23Q9Y3D9 190 aaKnown RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms