RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 HACE1Q8IYU2 909 aa10.35□□□□□ -0.75
SMAD3-215ENST00000560424 B3GALT6Q96L58 329 aa10.35□□□□□ -0.75
SMAD3-215ENST00000560424 TCEANC2Q96MN5 208 aa10.35□□□□□ -0.75
SMAD3-215ENST00000560424 CHRDQ9H2X0 955 aa10.35□□□□□ -0.75
SMAD3-215ENST00000560424 RBM28Q9NW13 759 aaKnown RBP10.35□□□□□ -0.75
SMAD3-215ENST00000560424 FBXW11Q9UKB1 542 aa10.35□□□□□ -0.75
SMAD3-215ENST00000560424 TADA2AO75478 443 aa10.34□□□□□ -0.75
SMAD3-215ENST00000560424 ECI2O75521 394 aa10.34□□□□□ -0.75
SMAD3-215ENST00000560424 NCLP19338 710 aaKnown RBP10.34□□□□□ -0.75
SMAD3-215ENST00000560424 MLH1P40692 756 aa10.34□□□□□ -0.75
SMAD3-215ENST00000560424 CXCL12P48061 93 aa10.34□□□□□ -0.75
SMAD3-215ENST00000560424 CLK2P49760 499 aaKnown RBP10.34□□□□□ -0.75
SMAD3-215ENST00000560424 NCBP1Q09161 790 aaKnown RBP10.34□□□□□ -0.75
SMAD3-215ENST00000560424 XKR3Q5GH77 459 aa10.34□□□□□ -0.75
SMAD3-215ENST00000560424 TYW1BQ6NUM6 668 aa10.34□□□□□ -0.75
SMAD3-215ENST00000560424 LILRA6Q6PI73 481 aa10.34□□□□□ -0.75
SMAD3-215ENST00000560424 MRPL10Q7Z7H8 261 aaKnown RBP10.34□□□□□ -0.75
SMAD3-215ENST00000560424 KSR1Q8IVT5 923 aa10.34□□□□□ -0.75
SMAD3-215ENST00000560424 GPR65Q8IYL9 337 aa10.34□□□□□ -0.75
SMAD3-215ENST00000560424 RNF168Q8IYW5 571 aaPredicted RBP10.34□□□□□ -0.75
SMAD3-215ENST00000560424 ITFG1Q8TB96 612 aa10.34□□□□□ -0.75
SMAD3-215ENST00000560424 ING5Q8WYH8 240 aa10.34□□□□□ -0.75
SMAD3-215ENST00000560424 DNASE1L2Q92874 299 aa10.34□□□□□ -0.75
SMAD3-215ENST00000560424 APOL6Q9BWW8 343 aa10.34□□□□□ -0.75
SMAD3-215ENST00000560424 TEKT3Q9BXF9 490 aa10.34□□□□□ -0.75
SMAD3-215ENST00000560424 TRIM6Q9C030 488 aaPredicted RBP10.34□□□□□ -0.75
SMAD3-215ENST00000560424 BRD9Q9H8M2 597 aa10.34□□□□□ -0.75
SMAD3-215ENST00000560424 CHST7Q9NS84 486 aa10.34□□□□□ -0.75
SMAD3-215ENST00000560424 BARHL2Q9NY43 387 aa10.34□□□□□ -0.75
SMAD3-215ENST00000560424 ADAM28Q9UKQ2 775 aa10.34□□□□□ -0.75
SMAD3-215ENST00000560424 MRPS23Q9Y3D9 190 aaKnown RBP10.34□□□□□ -0.75
SMAD3-215ENST00000560424 SF3B1O75533 1304 aaKnown RBP eCLIP10.33□□□□□ -0.76
SMAD3-215ENST00000560424 CNTNAP5Q8WYK1 1306 aa10.33□□□□□ -0.76
SMAD3-215ENST00000560424 ARL5CA6NH57 179 aa10.33□□□□□ -0.76
SMAD3-215ENST00000560424 SOBPA7XYQ1 873 aa10.33□□□□□ -0.76
SMAD3-215ENST00000560424 PDCP20941 246 aa10.33□□□□□ -0.76
SMAD3-215ENST00000560424 HOXA9P31269 272 aa10.33□□□□□ -0.76
SMAD3-215ENST00000560424 SCNN1GP51170 649 aa10.33□□□□□ -0.76
SMAD3-215ENST00000560424 LIMK1P53667 647 aa10.33□□□□□ -0.76
SMAD3-215ENST00000560424 HMGN5P82970 282 aaKnown RBP10.33□□□□□ -0.76
SMAD3-215ENST00000560424 SCRN1Q12765 414 aa10.33□□□□□ -0.76
SMAD3-215ENST00000560424 TARBP2Q15633 366 aaKnown RBP10.33□□□□□ -0.76
SMAD3-215ENST00000560424 UGCGQ16739 394 aa10.33□□□□□ -0.76
SMAD3-215ENST00000560424 LRCH2Q5VUJ6 765 aa10.33□□□□□ -0.76
SMAD3-215ENST00000560424 APOA5Q6Q788 366 aa10.33□□□□□ -0.76
SMAD3-215ENST00000560424 MIER3Q7Z3K6 550 aa10.33□□□□□ -0.76
SMAD3-215ENST00000560424 SRGAP1Q7Z6B7 1085 aa10.33□□□□□ -0.76
SMAD3-215ENST00000560424 CEP57Q86XR8 500 aa10.33□□□□□ -0.76
SMAD3-215ENST00000560424 CCDC83Q8IWF9 413 aa10.33□□□□□ -0.76
SMAD3-215ENST00000560424 NPAS3Q8IXF0 933 aa10.33□□□□□ -0.76
SMAD3-215ENST00000560424 REXO1Q8N1G1 1221 aaKnown RBP10.33□□□□□ -0.76
SMAD3-215ENST00000560424 CCDC12Q8WUD4 166 aaPredicted RBP10.33□□□□□ -0.76
SMAD3-215ENST00000560424 SLC7A3Q8WY07 619 aa10.33□□□□□ -0.76
SMAD3-215ENST00000560424 FAM3CQ92520 227 aa10.33□□□□□ -0.76
SMAD3-215ENST00000560424 COL26A1Q96A83 441 aa10.33□□□□□ -0.76
SMAD3-215ENST00000560424 MCRS1Q96EZ8 462 aa10.33□□□□□ -0.76
SMAD3-215ENST00000560424 MBOAT7Q96N66 472 aa10.33□□□□□ -0.76
SMAD3-215ENST00000560424 GAD1Q99259 594 aa10.33□□□□□ -0.76
SMAD3-215ENST00000560424 SH2D3AQ9BRG2 576 aa10.33□□□□□ -0.76
SMAD3-215ENST00000560424 LRRC2Q9BYS8 371 aa10.33□□□□□ -0.76
SMAD3-215ENST00000560424 GPR62Q9BZJ7 368 aa10.33□□□□□ -0.76
SMAD3-215ENST00000560424 LMAN1LQ9HAT1 526 aa10.33□□□□□ -0.76
SMAD3-215ENST00000560424 C6orf50Q9HD87 102 aa10.33□□□□□ -0.76
SMAD3-215ENST00000560424 BRPF3Q9ULD4 1205 aa10.33□□□□□ -0.76
SMAD3-215ENST00000560424 KCNH3Q9ULD8 1083 aa10.33□□□□□ -0.76
SMAD3-215ENST00000560424 SMC3Q9UQE7 1217 aa10.33□□□□□ -0.76
SMAD3-215ENST00000560424 COL4A3BPQ9Y5P4 624 aa10.33□□□□□ -0.76
SMAD3-215ENST00000560424 V9GY48 417 aaPredicted RBP10.33□□□□□ -0.76
SMAD3-215ENST00000560424 KLF18A0A0U1RQI7 1052 aa10.32□□□□□ -0.76
SMAD3-215ENST00000560424 DDX11L8A8MPP1 907 aa10.32□□□□□ -0.76
SMAD3-215ENST00000560424 C1QTNF9BB2RNN3 333 aa10.32□□□□□ -0.76
SMAD3-215ENST00000560424 CHURC1-FNTBB4DL54 471 aa10.32□□□□□ -0.76
SMAD3-215ENST00000560424 F8W810 466 aa10.32□□□□□ -0.76
SMAD3-215ENST00000560424 C1QTNF9P0C862 333 aa10.32□□□□□ -0.76
SMAD3-215ENST00000560424 SRGAP2CP0DJJ0 459 aa10.32□□□□□ -0.76
SMAD3-215ENST00000560424 FNTBP49356 437 aa10.32□□□□□ -0.76
SMAD3-215ENST00000560424 DSC1Q08554 894 aa10.32□□□□□ -0.76
SMAD3-215ENST00000560424 PSMD5Q16401 504 aa10.32□□□□□ -0.76
SMAD3-215ENST00000560424 HEATR6Q6AI08 1181 aaKnown RBP10.32□□□□□ -0.76
SMAD3-215ENST00000560424 PRSS55Q6UWB4 352 aaPredicted RBP10.32□□□□□ -0.76
SMAD3-215ENST00000560424 MAMSTRQ6ZN01 415 aa10.32□□□□□ -0.76
SMAD3-215ENST00000560424 LONP2Q86WA8 852 aa10.32□□□□□ -0.76
SMAD3-215ENST00000560424 EXOC8Q8IYI6 725 aa10.32□□□□□ -0.76
SMAD3-215ENST00000560424 SPRYD3Q8NCJ5 442 aa10.32□□□□□ -0.76
SMAD3-215ENST00000560424 SLC7A14Q8TBB6 771 aa10.32□□□□□ -0.76
SMAD3-215ENST00000560424 IRF7Q92985 503 aa10.32□□□□□ -0.76
SMAD3-215ENST00000560424 TTPALQ9BTX7 342 aa10.32□□□□□ -0.76
SMAD3-215ENST00000560424 NIFKQ9BYG3 293 aaKnown RBP10.32□□□□□ -0.76
SMAD3-215ENST00000560424 GDE1Q9NZC3 331 aa10.32□□□□□ -0.76
SMAD3-215ENST00000560424 KIF3AQ9Y496 699 aa10.32□□□□□ -0.76
SMAD3-215ENST00000560424 IPPQ9Y573 584 aa10.32□□□□□ -0.76
SMAD3-215ENST00000560424 TDRD15B5MCY1 1934 aaKnown RBP10.32□□□□□ -0.76
SMAD3-215ENST00000560424 WDR81Q562E7 1941 aa10.32□□□□□ -0.76
SMAD3-215ENST00000560424 ASPMQ8IZT6 3477 aa10.31□□□□□ -0.76
SMAD3-215ENST00000560424 IGKV6-21A0A0C4DH24 114 aa10.31□□□□□ -0.76
SMAD3-215ENST00000560424 CCDC196A0A1B0GTZ2 297 aa10.31□□□□□ -0.76
SMAD3-215ENST00000560424 TMEM150BA6NC51 233 aa10.31□□□□□ -0.76
SMAD3-215ENST00000560424 TMEM8BA6NDV4 472 aa10.31□□□□□ -0.76
SMAD3-215ENST00000560424 GOLGA8BA8MQT2 603 aa10.31□□□□□ -0.76
SMAD3-215ENST00000560424 AXIN1O15169 862 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms