RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 TIMMDC1Q9NPL8 285 aa20.41■□□□□ 0.86
SEMA4B-215ENST00000560089 MTRF1LQ9UGC7 380 aaKnown RBP20.41■□□□□ 0.86
SEMA4B-215ENST00000560089 ANGPTL2Q9UKU9 493 aa20.41■□□□□ 0.86
SEMA4B-215ENST00000560089 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.41■□□□□ 0.86
SEMA4B-215ENST00000560089 UQCRFS1P1P0C7P4 283 aa20.41■□□□□ 0.86
SEMA4B-215ENST00000560089 ZBTB48P10074 688 aaPredicted RBP20.41■□□□□ 0.86
SEMA4B-215ENST00000560089 GRAPQ13588 217 aa20.41■□□□□ 0.86
SEMA4B-215ENST00000560089 KIAA1755Q5JYT7 1200 aa20.41■□□□□ 0.86
SEMA4B-215ENST00000560089 TREML1Q86YW5 311 aa20.41■□□□□ 0.86
SEMA4B-215ENST00000560089 LRRC57Q8N9N7 239 aa20.41■□□□□ 0.86
SEMA4B-215ENST00000560089 GRAPLQ8TC17 118 aaPredicted RBP20.41■□□□□ 0.86
SEMA4B-215ENST00000560089 GLG1Q92896 1179 aa20.41■□□□□ 0.86
SEMA4B-215ENST00000560089 FAM84BQ96KN1 310 aaPredicted RBP20.41■□□□□ 0.86
SEMA4B-215ENST00000560089 EDEM3Q9BZQ6 932 aa20.41■□□□□ 0.86
SEMA4B-215ENST00000560089 ROPN1BQ9BZX4 212 aaPredicted RBP20.41■□□□□ 0.86
SEMA4B-215ENST00000560089 ROPN1Q9HAT0 212 aaPredicted RBP20.41■□□□□ 0.86
SEMA4B-215ENST00000560089 DISC1Q9NRI5 854 aa20.41■□□□□ 0.86
SEMA4B-215ENST00000560089 NKIRAS1Q9NYS0 192 aa20.41■□□□□ 0.86
SEMA4B-215ENST00000560089 SPDYE16A6NNV3 312 aaPredicted RBP20.4■□□□□ 0.86
SEMA4B-215ENST00000560089 FOXO6A8MYZ6 492 aa20.4■□□□□ 0.86
SEMA4B-215ENST00000560089 STRN3Q13033 797 aa20.4■□□□□ 0.86
SEMA4B-215ENST00000560089 ZNF362Q5T0B9 420 aaPredicted RBP20.4■□□□□ 0.86
SEMA4B-215ENST00000560089 UNC13DQ70J99 1090 aa20.4■□□□□ 0.86
SEMA4B-215ENST00000560089 SRPK1Q96SB4 655 aaKnown RBP20.4■□□□□ 0.86
SEMA4B-215ENST00000560089 STARD13Q9Y3M8 1113 aa20.4■□□□□ 0.86
SEMA4B-215ENST00000560089 NR2E1Q9Y466 385 aa20.4■□□□□ 0.86
SEMA4B-215ENST00000560089 WDR46O15213 610 aaKnown RBP20.4■□□□□ 0.86
SEMA4B-215ENST00000560089 MCM7P33993 719 aa20.4■□□□□ 0.86
SEMA4B-215ENST00000560089 VPS41P49754 854 aa20.4■□□□□ 0.86
SEMA4B-215ENST00000560089 SERPINB8P50452 374 aa20.4■□□□□ 0.86
SEMA4B-215ENST00000560089 ARFIP2P53365 341 aa20.4■□□□□ 0.86
SEMA4B-215ENST00000560089 KLHL35Q6PF15 583 aa20.4■□□□□ 0.86
SEMA4B-215ENST00000560089 MAGEB6Q8N7X4 407 aa20.4■□□□□ 0.86
SEMA4B-215ENST00000560089 FNDC8Q8TC99 324 aa20.4■□□□□ 0.86
SEMA4B-215ENST00000560089 FNBP1Q96RU3 617 aa20.4■□□□□ 0.86
SEMA4B-215ENST00000560089 TAOK3Q9H2K8 898 aa20.4■□□□□ 0.86
SEMA4B-215ENST00000560089 ZSWIM5Q9P217 1185 aa20.4■□□□□ 0.86
SEMA4B-215ENST00000560089 ZNF532Q9HCE3 1301 aa20.4■□□□□ 0.86
SEMA4B-215ENST00000560089 CCDC160A6NGH7 325 aa20.4■□□□□ 0.86
SEMA4B-215ENST00000560089 NFKBIAP25963 317 aa20.4■□□□□ 0.86
SEMA4B-215ENST00000560089 FOXN2P32314 431 aa20.4■□□□□ 0.86
SEMA4B-215ENST00000560089 COPB2P35606 906 aa20.4■□□□□ 0.86
SEMA4B-215ENST00000560089 PTENP60484 403 aa20.4■□□□□ 0.86
SEMA4B-215ENST00000560089 PDE4DQ08499 809 aa20.4■□□□□ 0.86
SEMA4B-215ENST00000560089 ADAT2Q7Z6V5 191 aaKnown RBP20.4■□□□□ 0.86
SEMA4B-215ENST00000560089 NLGN1Q8N2Q7 840 aa20.4■□□□□ 0.86
SEMA4B-215ENST00000560089 ZFP69BQ9UJL9 534 aa20.4■□□□□ 0.86
SEMA4B-215ENST00000560089 MAP3K10Q02779 954 aa20.39■□□□□ 0.85
SEMA4B-215ENST00000560089 MCUR1Q96AQ8 359 aa20.39■□□□□ 0.85
SEMA4B-215ENST00000560089 SNX27Q96L92 541 aa20.39■□□□□ 0.85
SEMA4B-215ENST00000560089 PLIN2Q99541 437 aa20.39■□□□□ 0.85
SEMA4B-215ENST00000560089 TANGO6Q9C0B7 1094 aa20.39■□□□□ 0.85
SEMA4B-215ENST00000560089 KIAA0391O15091 583 aaKnown RBP20.39■□□□□ 0.85
SEMA4B-215ENST00000560089 EXOC3O60645 756 aa20.39■□□□□ 0.85
SEMA4B-215ENST00000560089 HNRNPCL1O60812 293 aaKnown RBP20.39■□□□□ 0.85
SEMA4B-215ENST00000560089 PRDM1O75626 825 aa20.39■□□□□ 0.85
SEMA4B-215ENST00000560089 UBE4AQ14139 1066 aa20.39■□□□□ 0.85
SEMA4B-215ENST00000560089 MYBPC2Q14324 1141 aa20.39■□□□□ 0.85
SEMA4B-215ENST00000560089 PHF20Q9BVI0 1012 aa20.39■□□□□ 0.85
SEMA4B-215ENST00000560089 SUGT1Q9Y2Z0 365 aa20.39■□□□□ 0.85
SEMA4B-215ENST00000560089 FAM187AA6NFU0 413 aa20.38■□□□□ 0.85
SEMA4B-215ENST00000560089 BTNL10A8MVZ5 291 aa20.38■□□□□ 0.85
SEMA4B-215ENST00000560089 PDE6AP16499 860 aa20.38■□□□□ 0.85
SEMA4B-215ENST00000560089 KLHL30Q0D2K2 578 aa20.38■□□□□ 0.85
SEMA4B-215ENST00000560089 SLC15A2Q16348 729 aa20.38■□□□□ 0.85
SEMA4B-215ENST00000560089 NAALADL2Q58DX5 795 aa20.38■□□□□ 0.85
SEMA4B-215ENST00000560089 CAVIN4Q5BKX8 364 aa20.38■□□□□ 0.85
SEMA4B-215ENST00000560089 SLC2A7Q6PXP3 512 aa20.38■□□□□ 0.85
SEMA4B-215ENST00000560089 ACAD11Q709F0 780 aa20.38■□□□□ 0.85
SEMA4B-215ENST00000560089 JAMLQ86YT9 394 aa20.38■□□□□ 0.85
SEMA4B-215ENST00000560089 MYOCDQ8IZQ8 938 aa20.38■□□□□ 0.85
SEMA4B-215ENST00000560089 EPB41L1Q9H4G0 881 aa20.38■□□□□ 0.85
SEMA4B-215ENST00000560089 CEP72Q9P209 647 aa20.38■□□□□ 0.85
SEMA4B-215ENST00000560089 PHTF1Q9UMS5 762 aa20.38■□□□□ 0.85
SEMA4B-215ENST00000560089 ZNF804BA4D1E1 1349 aa20.38■□□□□ 0.85
SEMA4B-215ENST00000560089 CCDC22O60826 627 aa20.38■□□□□ 0.85
SEMA4B-215ENST00000560089 ALDH2P05091 517 aa20.38■□□□□ 0.85
SEMA4B-215ENST00000560089 ADD2P35612 726 aa20.38■□□□□ 0.85
SEMA4B-215ENST00000560089 STK4Q13043 487 aa20.38■□□□□ 0.85
SEMA4B-215ENST00000560089 THOC5Q13769 683 aaKnown RBP20.38■□□□□ 0.85
SEMA4B-215ENST00000560089 RAPGEF1Q13905 1077 aa20.38■□□□□ 0.85
SEMA4B-215ENST00000560089 RBM44Q6ZP01 1051 aaKnown RBP20.38■□□□□ 0.85
SEMA4B-215ENST00000560089 SYN2Q92777 582 aaPredicted RBP20.38■□□□□ 0.85
SEMA4B-215ENST00000560089 ZNF512BQ96KM6 892 aaPredicted RBP20.38■□□□□ 0.85
SEMA4B-215ENST00000560089 LRP2BPQ9P2M1 347 aa20.38■□□□□ 0.85
SEMA4B-215ENST00000560089 ARMCX3Q9UH62 379 aaPredicted RBP20.38■□□□□ 0.85
SEMA4B-215ENST00000560089 PFASO15067 1338 aa20.38■□□□□ 0.85
SEMA4B-215ENST00000560089 IPO5O00410 1097 aaKnown RBP20.37■□□□□ 0.85
SEMA4B-215ENST00000560089 GTF2H1P32780 548 aa20.37■□□□□ 0.85
SEMA4B-215ENST00000560089 CLCN2P51788 898 aa20.37■□□□□ 0.85
SEMA4B-215ENST00000560089 FAM83BQ5T0W9 1011 aa20.37■□□□□ 0.85
SEMA4B-215ENST00000560089 SCYL3Q8IZE3 742 aa20.37■□□□□ 0.85
SEMA4B-215ENST00000560089 MIGA1Q8NAN2 632 aa20.37■□□□□ 0.85
SEMA4B-215ENST00000560089 GFM2Q969S9 779 aaKnown RBP20.37■□□□□ 0.85
SEMA4B-215ENST00000560089 BTBD10Q9BSF8 475 aa20.37■□□□□ 0.85
SEMA4B-215ENST00000560089 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.37■□□□□ 0.859e-8■■■□□ 17.1
SEMA4B-215ENST00000560089 COL1A1P02452 1464 aaPredicted RBP20.37■□□□□ 0.85
SEMA4B-215ENST00000560089 NID2Q14112 1375 aa20.37■□□□□ 0.85
SEMA4B-215ENST00000560089 TMEM110-MUSTN1A8MSY1 372 aa20.37■□□□□ 0.85
SEMA4B-215ENST00000560089 GSC2O15499 205 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms