RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 FAM160A1Q05DH4 1040 aa22.7■■□□□ 1.22
PSEN1-225ENST00000560005 XKR3Q5GH77 459 aa22.7■■□□□ 1.22
PSEN1-225ENST00000560005 EARS2Q5JPH6 523 aaKnown RBP22.7■■□□□ 1.22
PSEN1-225ENST00000560005 LRCH2Q5VUJ6 765 aa22.7■■□□□ 1.22
PSEN1-225ENST00000560005 NEK8Q86SG6 692 aa22.7■■□□□ 1.22
PSEN1-225ENST00000560005 SLC5A5Q92911 643 aa22.7■■□□□ 1.22
PSEN1-225ENST00000560005 HERC2P3Q9BVR0 1158 aa22.7■■□□□ 1.22
PSEN1-225ENST00000560005 TEKT3Q9BXF9 490 aa22.7■■□□□ 1.22
PSEN1-225ENST00000560005 AGPAT5Q9NUQ2 364 aa22.7■■□□□ 1.22
PSEN1-225ENST00000560005 MARCH5Q9NX47 278 aa22.7■■□□□ 1.22
PSEN1-225ENST00000560005 ACACBO00763 2458 aa22.7■■□□□ 1.22
PSEN1-225ENST00000560005 POTEMA6NI47 508 aa22.69■■□□□ 1.22
PSEN1-225ENST00000560005 EDIL3O43854 480 aa22.69■■□□□ 1.22
PSEN1-225ENST00000560005 KRT37O76014 449 aa22.69■■□□□ 1.22
PSEN1-225ENST00000560005 STBD1O95210 358 aa22.69■■□□□ 1.22
PSEN1-225ENST00000560005 MARCKSP29966 332 aaPredicted RBP22.69■■□□□ 1.22
PSEN1-225ENST00000560005 ZNF174Q15697 407 aa22.69■■□□□ 1.22
PSEN1-225ENST00000560005 RSPO4Q2I0M5 234 aaPredicted RBP22.69■■□□□ 1.22
PSEN1-225ENST00000560005 AXDND1Q5T1B0 1012 aaPredicted RBP22.69■■□□□ 1.22
PSEN1-225ENST00000560005 DCLRE1AQ6PJP8 1040 aa22.69■■□□□ 1.22
PSEN1-225ENST00000560005 POTEGQ6S5H5 508 aa22.69■■□□□ 1.22
PSEN1-225ENST00000560005 FSIP1Q8NA03 581 aa22.69■■□□□ 1.22
PSEN1-225ENST00000560005 ST13P5Q8NFI4 369 aaPredicted RBP22.69■■□□□ 1.22
PSEN1-225ENST00000560005 ZNF707Q96C28 371 aaPredicted RBP22.69■■□□□ 1.22
PSEN1-225ENST00000560005 CNTNAP3BQ96NU0 1288 aa22.69■■□□□ 1.22
PSEN1-225ENST00000560005 CNTNAP3Q9BZ76 1288 aa22.69■■□□□ 1.22
PSEN1-225ENST00000560005 FOXQ1Q9C009 403 aa22.69■■□□□ 1.22
PSEN1-225ENST00000560005 TMEM63CQ9P1W3 806 aa22.69■■□□□ 1.22
PSEN1-225ENST00000560005 KANSL3Q9P2N6 904 aa22.69■■□□□ 1.22
PSEN1-225ENST00000560005 SSX2IPQ9Y2D8 614 aa22.69■■□□□ 1.22
PSEN1-225ENST00000560005 FAM205CA6NFA0 338 aa22.68■■□□□ 1.22
PSEN1-225ENST00000560005 SPATA31D3P0C874 917 aa22.68■■□□□ 1.22
PSEN1-225ENST00000560005 GLULP15104 373 aa22.68■■□□□ 1.22
PSEN1-225ENST00000560005 ZNF445P59923 1031 aa22.68■■□□□ 1.22
PSEN1-225ENST00000560005 ATP2C1P98194 919 aaPredicted RBP22.68■■□□□ 1.22
PSEN1-225ENST00000560005 INF2Q27J81 1249 aa22.68■■□□□ 1.22
PSEN1-225ENST00000560005 SPATA31D4Q6ZUB0 917 aa22.68■■□□□ 1.22
PSEN1-225ENST00000560005 GET4Q7L5D6 327 aaPredicted RBP22.68■■□□□ 1.22
PSEN1-225ENST00000560005 MIER3Q7Z3K6 550 aa22.68■■□□□ 1.22
PSEN1-225ENST00000560005 MRPL10Q7Z7H8 261 aaKnown RBP22.68■■□□□ 1.22
PSEN1-225ENST00000560005 SUMF1Q8NBK3 374 aa22.68■■□□□ 1.22
PSEN1-225ENST00000560005 PIDD1Q9HB75 910 aa22.68■■□□□ 1.22
PSEN1-225ENST00000560005 FAM13BQ9NYF5 915 aa22.68■■□□□ 1.22
PSEN1-225ENST00000560005 CNTNAP2Q9UHC6 1331 aa22.67■■□□□ 1.22
PSEN1-225ENST00000560005 KINO60870 393 aaKnown RBP22.67■■□□□ 1.22
PSEN1-225ENST00000560005 LRRN2O75325 713 aa22.67■■□□□ 1.22
PSEN1-225ENST00000560005 MAFO75444 373 aaPredicted RBP22.67■■□□□ 1.22
PSEN1-225ENST00000560005 LAMP2P13473 410 aa22.67■■□□□ 1.22
PSEN1-225ENST00000560005 GCFC2P16383 781 aaKnown RBP22.67■■□□□ 1.22
PSEN1-225ENST00000560005 GLUD2P49448 558 aa22.67■■□□□ 1.22
PSEN1-225ENST00000560005 PTGDRQ13258 359 aa22.67■■□□□ 1.22
PSEN1-225ENST00000560005 HTR4Q13639 388 aa22.67■■□□□ 1.22
PSEN1-225ENST00000560005 ZSCAN23Q3MJ62 389 aa22.67■■□□□ 1.22
PSEN1-225ENST00000560005 KIAA0319Q5VV43 1072 aa22.67■■□□□ 1.22
PSEN1-225ENST00000560005 PJA1Q8NG27 643 aa22.67■■□□□ 1.22
PSEN1-225ENST00000560005 TBCKQ8TEA7 893 aa22.67■■□□□ 1.22
PSEN1-225ENST00000560005 IFT122Q9HBG6 1241 aa22.67■■□□□ 1.22
PSEN1-225ENST00000560005 RXFP1Q9HBX9 757 aa22.67■■□□□ 1.22
PSEN1-225ENST00000560005 SLC2A4RGQ9NR83 387 aa22.67■■□□□ 1.22
PSEN1-225ENST00000560005 NUMBLQ9Y6R0 609 aa22.67■■□□□ 1.22
PSEN1-225ENST00000560005 FAM237AA0A1B0GTK4 181 aa22.66■■□□□ 1.22
PSEN1-225ENST00000560005 ANHXE9PGG2 379 aa22.66■■□□□ 1.22
PSEN1-225ENST00000560005 PRPHP41219 470 aa22.66■■□□□ 1.22
PSEN1-225ENST00000560005 OR1G1P47890 313 aa22.66■■□□□ 1.22
PSEN1-225ENST00000560005 USP11P51784 963 aa22.66■■□□□ 1.22
PSEN1-225ENST00000560005 MAML2Q8IZL2 1156 aaPredicted RBP22.66■■□□□ 1.22
PSEN1-225ENST00000560005 RDM1Q8NG50 284 aa22.66■■□□□ 1.22
PSEN1-225ENST00000560005 PYM1Q9BRP8 204 aaKnown RBP22.66■■□□□ 1.22
PSEN1-225ENST00000560005 NUP62CLQ9H1M0 184 aa22.66■■□□□ 1.22
PSEN1-225ENST00000560005 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.66■■□□□ 1.22
PSEN1-225ENST00000560005 FBXO2Q9UK22 296 aaPredicted RBP22.66■■□□□ 1.22
PSEN1-225ENST00000560005 PSMD10O75832 226 aa22.65■■□□□ 1.22
PSEN1-225ENST00000560005 LIG1P18858 919 aa22.65■■□□□ 1.22
PSEN1-225ENST00000560005 MCM7P33993 719 aa22.65■■□□□ 1.22
PSEN1-225ENST00000560005 UBXN11Q5T124 520 aa22.65■■□□□ 1.22
PSEN1-225ENST00000560005 RESP18Q5W5W9 173 aa22.65■■□□□ 1.22
PSEN1-225ENST00000560005 PALB2Q86YC2 1186 aa22.65■■□□□ 1.22
PSEN1-225ENST00000560005 COLGALT2Q8IYK4 626 aa22.65■■□□□ 1.22
PSEN1-225ENST00000560005 RNF168Q8IYW5 571 aaPredicted RBP22.65■■□□□ 1.22
PSEN1-225ENST00000560005 CCDC34Q96HJ3 373 aa22.65■■□□□ 1.22
PSEN1-225ENST00000560005 NT5C3AQ9H0P0 336 aa22.65■■□□□ 1.22
PSEN1-225ENST00000560005 F8W810 466 aa22.64■■□□□ 1.21
PSEN1-225ENST00000560005 EFEMP2O95967 443 aa22.64■■□□□ 1.21
PSEN1-225ENST00000560005 PLA2G4FQ68DD2 849 aa22.64■■□□□ 1.21
PSEN1-225ENST00000560005 PPP4R3AQ6IN85 833 aa22.64■■□□□ 1.21
PSEN1-225ENST00000560005 MOXD1Q6UVY6 613 aa22.64■■□□□ 1.21
PSEN1-225ENST00000560005 ENGASEQ8NFI3 743 aa22.64■■□□□ 1.21
PSEN1-225ENST00000560005 HDAC7Q8WUI4 952 aa22.64■■□□□ 1.21
PSEN1-225ENST00000560005 TIGD1Q96MW7 591 aa22.64■■□□□ 1.21
PSEN1-225ENST00000560005 CLSTN2Q9H4D0 955 aa22.64■■□□□ 1.21
PSEN1-225ENST00000560005 PLEKHA4Q9H4M7 779 aa22.64■■□□□ 1.21
PSEN1-225ENST00000560005 COL4A3BPQ9Y5P4 624 aa22.64■■□□□ 1.21
PSEN1-225ENST00000560005 TGM5O43548 720 aa22.63■■□□□ 1.21
PSEN1-225ENST00000560005 GAS2O43903 313 aaKnown RBP22.63■■□□□ 1.21
PSEN1-225ENST00000560005 CCNT1O60563 726 aaKnown RBP22.63■■□□□ 1.21
PSEN1-225ENST00000560005 PAPLNO95428 1278 aa22.63■■□□□ 1.21
PSEN1-225ENST00000560005 HOXA11P31270 313 aaPredicted RBP22.63■■□□□ 1.21
PSEN1-225ENST00000560005 STARD6P59095 220 aa22.63■■□□□ 1.21
PSEN1-225ENST00000560005 DSG1Q02413 1049 aa22.63■■□□□ 1.21
PSEN1-225ENST00000560005 ANO5Q75V66 913 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms