RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 THAP9Q9H5L6 903 aa10.24□□□□□ -0.77
HERC1-206ENST00000559996 CHST12Q9NRB3 414 aa10.24□□□□□ -0.77
HERC1-206ENST00000559996 CPSF3Q9UKF6 684 aaKnown RBP10.24□□□□□ -0.77
HERC1-206ENST00000559996 AGO2Q9UKV8 859 aaKnown RBP10.24□□□□□ -0.77
HERC1-206ENST00000559996 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.23□□□□□ -0.77
HERC1-206ENST00000559996 MEIS3P2A8K0S8 358 aa10.23□□□□□ -0.77
HERC1-206ENST00000559996 C9IYK1 514 aa10.23□□□□□ -0.77
HERC1-206ENST00000559996 ENPP3O14638 875 aa10.23□□□□□ -0.77
HERC1-206ENST00000559996 N4BP3O15049 544 aa10.23□□□□□ -0.77
HERC1-206ENST00000559996 MAPK13O15264 365 aa10.23□□□□□ -0.77
HERC1-206ENST00000559996 OGTO15294 1046 aa10.23□□□□□ -0.77
HERC1-206ENST00000559996 CLDN3O15551 220 aa10.23□□□□□ -0.77
HERC1-206ENST00000559996 EXTL3O43909 919 aa10.23□□□□□ -0.77
HERC1-206ENST00000559996 ZNF623O75123 536 aa10.23□□□□□ -0.77
HERC1-206ENST00000559996 ERLIN2O94905 339 aa10.23□□□□□ -0.77
HERC1-206ENST00000559996 MCF2P10911 925 aa10.23□□□□□ -0.77
HERC1-206ENST00000559996 ATF7P17544 494 aaPredicted RBP10.23□□□□□ -0.77
HERC1-206ENST00000559996 ACOT2P49753 483 aa10.23□□□□□ -0.77
HERC1-206ENST00000559996 CYP2J2P51589 502 aa10.23□□□□□ -0.77
HERC1-206ENST00000559996 SLC10A6Q3KNW5 377 aa10.23□□□□□ -0.77
HERC1-206ENST00000559996 HSP90AA4PQ58FG1 418 aa10.23□□□□□ -0.77
HERC1-206ENST00000559996 MIIPQ5JXC2 388 aa10.23□□□□□ -0.77
HERC1-206ENST00000559996 MFSD5Q6N075 450 aa10.23□□□□□ -0.77
HERC1-206ENST00000559996 SLC27A1Q6PCB7 646 aa10.23□□□□□ -0.77
HERC1-206ENST00000559996 ALKAL1Q6UXT8 129 aa10.23□□□□□ -0.77
HERC1-206ENST00000559996 HS2ST1Q7LGA3 356 aa10.23□□□□□ -0.77
HERC1-206ENST00000559996 MRPL10Q7Z7H8 261 aaKnown RBP10.23□□□□□ -0.77
HERC1-206ENST00000559996 ZNF598Q86UK7 904 aaKnown RBP10.23□□□□□ -0.77
HERC1-206ENST00000559996 TNS4Q8IZW8 715 aa10.23□□□□□ -0.77
HERC1-206ENST00000559996 GPD1LQ8N335 351 aa10.23□□□□□ -0.77
HERC1-206ENST00000559996 CCDC155Q8N6L0 562 aa10.23□□□□□ -0.77
HERC1-206ENST00000559996 XXYLT1Q8NBI6 393 aa10.23□□□□□ -0.77
HERC1-206ENST00000559996 RDH13Q8NBN7 331 aa10.23□□□□□ -0.77
HERC1-206ENST00000559996 GOLGA5Q8TBA6 731 aa10.23□□□□□ -0.77
HERC1-206ENST00000559996 POMGNT1Q8WZA1 660 aa10.23□□□□□ -0.77
HERC1-206ENST00000559996 ZNF516Q92618 1163 aa10.23□□□□□ -0.77
HERC1-206ENST00000559996 BICD1Q96G01 975 aa10.23□□□□□ -0.77
HERC1-206ENST00000559996 NAP1L5Q96NT1 182 aaPredicted RBP10.23□□□□□ -0.77
HERC1-206ENST00000559996 TSG101Q99816 390 aa10.23□□□□□ -0.77
HERC1-206ENST00000559996 MKNK1Q9BUB5 465 aa10.23□□□□□ -0.77
HERC1-206ENST00000559996 RGS18Q9NS28 235 aa10.23□□□□□ -0.77
HERC1-206ENST00000559996 LIMA1Q9UHB6 759 aaKnown RBP10.23□□□□□ -0.77
HERC1-206ENST00000559996 TANC1Q9C0D5 1861 aa10.23□□□□□ -0.77
HERC1-206ENST00000559996 A0A0U1RQF3 1178 aa10.22□□□□□ -0.77
HERC1-206ENST00000559996 KIAA0391O15091 583 aaKnown RBP10.22□□□□□ -0.77
HERC1-206ENST00000559996 CETN3O15182 167 aa10.22□□□□□ -0.77
HERC1-206ENST00000559996 PARNO95453 639 aaKnown RBP10.22□□□□□ -0.77
HERC1-206ENST00000559996 NPTXRO95502 500 aa10.22□□□□□ -0.77
HERC1-206ENST00000559996 STAG3L1P0CL83 205 aa10.22□□□□□ -0.77
HERC1-206ENST00000559996 CSF2RAP15509 400 aa10.22□□□□□ -0.77
HERC1-206ENST00000559996 RPL13P26373 211 aaKnown RBP10.22□□□□□ -0.77
HERC1-206ENST00000559996 GRM5P41594 1212 aa10.22□□□□□ -0.77
HERC1-206ENST00000559996 DLG4P78352 724 aa10.22□□□□□ -0.77
HERC1-206ENST00000559996 CLDN10P78369 228 aa10.22□□□□□ -0.77
HERC1-206ENST00000559996 POU5F1Q01860 360 aaKnown RBP10.22□□□□□ -0.77
HERC1-206ENST00000559996 PAK2Q13177 524 aa10.22□□□□□ -0.77
HERC1-206ENST00000559996 NOLC1Q14978 699 aaKnown RBP eCLIP10.22□□□□□ -0.77
HERC1-206ENST00000559996 ENOX2Q16206 610 aaKnown RBP10.22□□□□□ -0.77
HERC1-206ENST00000559996 XKR4Q5GH76 650 aa10.22□□□□□ -0.77
HERC1-206ENST00000559996 TCP11X2Q5H9J9 407 aa10.22□□□□□ -0.77
HERC1-206ENST00000559996 NOTUMQ6P988 496 aa10.22□□□□□ -0.77
HERC1-206ENST00000559996 FRMD5Q7Z6J6 570 aa10.22□□□□□ -0.77
HERC1-206ENST00000559996 TRIM59Q8IWR1 403 aa10.22□□□□□ -0.77
HERC1-206ENST00000559996 THNSL1Q8IYQ7 743 aa10.22□□□□□ -0.77
HERC1-206ENST00000559996 TMEM130Q8N3G9 435 aa10.22□□□□□ -0.77
HERC1-206ENST00000559996 GSTCDQ8NEC7 633 aa10.22□□□□□ -0.77
HERC1-206ENST00000559996 TMC2Q8TDI7 906 aa10.22□□□□□ -0.77
HERC1-206ENST00000559996 PARD3BQ8TEW8 1205 aa10.22□□□□□ -0.77
HERC1-206ENST00000559996 NOC3LQ8WTT2 800 aaKnown RBP10.22□□□□□ -0.77
HERC1-206ENST00000559996 ADAM2Q99965 735 aa10.22□□□□□ -0.77
HERC1-206ENST00000559996 FAM213AQ9BRX8 229 aa10.22□□□□□ -0.77
HERC1-206ENST00000559996 MSTO1Q9BUK6 570 aa10.22□□□□□ -0.77
HERC1-206ENST00000559996 IFIH1Q9BYX4 1025 aaKnown RBP10.22□□□□□ -0.77
HERC1-206ENST00000559996 RNF19AQ9NV58 838 aa10.22□□□□□ -0.77
HERC1-206ENST00000559996 INTS13Q9NVM9 706 aa10.22□□□□□ -0.77
HERC1-206ENST00000559996 ANKFY1Q9P2R3 1169 aa10.22□□□□□ -0.77
HERC1-206ENST00000559996 PIN4Q9Y237 131 aaKnown RBP10.22□□□□□ -0.77
HERC1-206ENST00000559996 HES2Q9Y543 173 aa10.22□□□□□ -0.77
HERC1-206ENST00000559996 IPPQ9Y573 584 aa10.22□□□□□ -0.77
HERC1-206ENST00000559996 ANK1P16157 1881 aa10.21□□□□□ -0.77
HERC1-206ENST00000559996 TTC26A0AVF1 554 aa10.21□□□□□ -0.77
HERC1-206ENST00000559996 BECN2A8MW95 431 aa10.21□□□□□ -0.77
HERC1-206ENST00000559996 KCNJ18B7U540 433 aa10.21□□□□□ -0.77
HERC1-206ENST00000559996 SLC16A3O15427 465 aaKnown RBP10.21□□□□□ -0.77
HERC1-206ENST00000559996 EXOC3O60645 756 aa10.21□□□□□ -0.77
HERC1-206ENST00000559996 LDHAP00338 332 aaKnown RBP10.21□□□□□ -0.77
HERC1-206ENST00000559996 PSMC2P35998 433 aaKnown RBP10.21□□□□□ -0.77
HERC1-206ENST00000559996 AFF1P51825 1210 aaKnown RBP10.21□□□□□ -0.77
HERC1-206ENST00000559996 EPHB4P54760 987 aa10.21□□□□□ -0.77
HERC1-206ENST00000559996 CYP24A1Q07973 514 aa10.21□□□□□ -0.77
HERC1-206ENST00000559996 KCNJ12Q14500 433 aa10.21□□□□□ -0.77
HERC1-206ENST00000559996 KRT31Q15323 416 aa10.21□□□□□ -0.77
HERC1-206ENST00000559996 SNRNP35Q16560 246 aaKnown RBP10.21□□□□□ -0.77
HERC1-206ENST00000559996 UVSSAQ2YD98 709 aa10.21□□□□□ -0.77
HERC1-206ENST00000559996 ZNF568Q3ZCX4 644 aa10.21□□□□□ -0.77
HERC1-206ENST00000559996 CEP135Q66GS9 1140 aa10.21□□□□□ -0.77
HERC1-206ENST00000559996 DPY19L2P1Q6NXN4 242 aa10.21□□□□□ -0.77
HERC1-206ENST00000559996 AGMOQ6ZNB7 445 aa10.21□□□□□ -0.77
HERC1-206ENST00000559996 CXorf38Q8TB03 319 aa10.21□□□□□ -0.77
HERC1-206ENST00000559996 SLC35C1Q96A29 364 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms