RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 CCDC170Q8IYT3 715 aa8.36□□□□□ -1.07
LRRC28-211ENST00000558890 DAW1Q8N136 415 aa8.36□□□□□ -1.07
LRRC28-211ENST00000558890 KRT222Q8N1A0 295 aa8.36□□□□□ -1.07
LRRC28-211ENST00000558890 SLC35F6Q8N357 371 aa8.36□□□□□ -1.07
LRRC28-211ENST00000558890 GPR161Q8N6U8 529 aaKnown RBP8.36□□□□□ -1.07
LRRC28-211ENST00000558890 RSPH1Q8WYR4 309 aa8.36□□□□□ -1.07
LRRC28-211ENST00000558890 HERVK_113Q902F9 699 aa8.36□□□□□ -1.07
LRRC28-211ENST00000558890 RABGGTAQ92696 567 aa8.36□□□□□ -1.07
LRRC28-211ENST00000558890 IFT74Q96LB3 600 aa8.36□□□□□ -1.07
LRRC28-211ENST00000558890 CEP63Q96MT8 703 aa8.36□□□□□ -1.07
LRRC28-211ENST00000558890 RUSC1Q9BVN2 902 aa8.36□□□□□ -1.07
LRRC28-211ENST00000558890 SEMA6BQ9H3T3 888 aa8.36□□□□□ -1.07
LRRC28-211ENST00000558890 TMEM134Q9H6X4 195 aa8.36□□□□□ -1.07
LRRC28-211ENST00000558890 CDHR5Q9HBB8 845 aa8.36□□□□□ -1.07
LRRC28-211ENST00000558890 CXXC1Q9P0U4 656 aaPredicted RBP8.36□□□□□ -1.07
LRRC28-211ENST00000558890 ARHGAP28Q9P2N2 729 aa8.36□□□□□ -1.07
LRRC28-211ENST00000558890 PRKAG2Q9UGJ0 569 aa8.36□□□□□ -1.07
LRRC28-211ENST00000558890 CDC23Q9UJX2 597 aa8.36□□□□□ -1.07
LRRC28-211ENST00000558890 SCN5AQ14524 2016 aa8.36□□□□□ -1.07
LRRC28-211ENST00000558890 M0QZ92 97 aa8.35□□□□□ -1.07
LRRC28-211ENST00000558890 KIAA0391O15091 583 aaKnown RBP8.35□□□□□ -1.07
LRRC28-211ENST00000558890 KRT86O43790 486 aa8.35□□□□□ -1.07
LRRC28-211ENST00000558890 HIP1RO75146 1068 aa8.35□□□□□ -1.07
LRRC28-211ENST00000558890 GPR32O75388 356 aa8.35□□□□□ -1.07
LRRC28-211ENST00000558890 PPP1R37O75864 691 aa8.35□□□□□ -1.07
LRRC28-211ENST00000558890 FAM13AO94988 1023 aa8.35□□□□□ -1.07
LRRC28-211ENST00000558890 PIGRP01833 764 aa8.35□□□□□ -1.07
LRRC28-211ENST00000558890 RFC2P35250 354 aa8.35□□□□□ -1.07
LRRC28-211ENST00000558890 ARHGAP25P42331 645 aa8.35□□□□□ -1.07
LRRC28-211ENST00000558890 CBX1P83916 185 aa8.35□□□□□ -1.07
LRRC28-211ENST00000558890 GTF2BQ00403 316 aa8.35□□□□□ -1.07
LRRC28-211ENST00000558890 CDK17Q00537 523 aa8.35□□□□□ -1.07
LRRC28-211ENST00000558890 FKBP3Q00688 224 aaKnown RBP8.35□□□□□ -1.07
LRRC28-211ENST00000558890 POU5F1Q01860 360 aaKnown RBP8.35□□□□□ -1.07
LRRC28-211ENST00000558890 PPIGQ13427 754 aaKnown RBP eCLIP8.35□□□□□ -1.07
LRRC28-211ENST00000558890 DRP2Q13474 957 aa8.35□□□□□ -1.07
LRRC28-211ENST00000558890 BMS1Q14692 1282 aaKnown RBP8.35□□□□□ -1.07
LRRC28-211ENST00000558890 ZNF662Q6ZS27 426 aa8.35□□□□□ -1.07
LRRC28-211ENST00000558890 RTN4RL1Q86UN2 441 aaPredicted RBP8.35□□□□□ -1.07
LRRC28-211ENST00000558890 TDHQ8IZJ6 230 aa8.35□□□□□ -1.07
LRRC28-211ENST00000558890 CRIPAKQ8N1N5 446 aa8.35□□□□□ -1.07
LRRC28-211ENST00000558890 TMEM199Q8N511 208 aa8.35□□□□□ -1.07
LRRC28-211ENST00000558890 LRRN4CLQ8ND94 238 aa8.35□□□□□ -1.07
LRRC28-211ENST00000558890 NEK11Q8NG66 645 aa8.35□□□□□ -1.07
LRRC28-211ENST00000558890 DNAJB3Q8WWF6 145 aa8.35□□□□□ -1.07
LRRC28-211ENST00000558890 JAKMIP2Q96AA8 810 aa8.35□□□□□ -1.07
LRRC28-211ENST00000558890 FIZ1Q96SL8 496 aa8.35□□□□□ -1.07
LRRC28-211ENST00000558890 STRA6Q9BX79 667 aa8.35□□□□□ -1.07
LRRC28-211ENST00000558890 EDEM3Q9BZQ6 932 aa8.35□□□□□ -1.07
LRRC28-211ENST00000558890 UBE2OQ9C0C9 1292 aaKnown RBP8.35□□□□□ -1.07
LRRC28-211ENST00000558890 TTYH3Q9C0H2 523 aa8.35□□□□□ -1.07
LRRC28-211ENST00000558890 ADAMTS10Q9H324 1103 aa8.35□□□□□ -1.07
LRRC28-211ENST00000558890 NDST4Q9H3R1 872 aa8.35□□□□□ -1.07
LRRC28-211ENST00000558890 DEF6Q9H4E7 631 aa8.35□□□□□ -1.07
LRRC28-211ENST00000558890 TMEM206Q9H813 350 aa8.35□□□□□ -1.07
LRRC28-211ENST00000558890 ZMYM2Q9UBW7 1377 aa8.35□□□□□ -1.07
LRRC28-211ENST00000558890 RSPH10B2B2RC85 870 aa8.34□□□□□ -1.07
LRRC28-211ENST00000558890 EIF3CLB5ME19 914 aaKnown RBP8.34□□□□□ -1.07
LRRC28-211ENST00000558890 FANCGO15287 622 aa8.34□□□□□ -1.07
LRRC28-211ENST00000558890 PFKMP08237 780 aa8.34□□□□□ -1.07
LRRC28-211ENST00000558890 RSPH10BP0C881 870 aa8.34□□□□□ -1.07
LRRC28-211ENST00000558890 GLRA2P23416 452 aa8.34□□□□□ -1.07
LRRC28-211ENST00000558890 AXLP30530 894 aa8.34□□□□□ -1.07
LRRC28-211ENST00000558890 THPOP40225 353 aa8.34□□□□□ -1.07
LRRC28-211ENST00000558890 PHKA2P46019 1235 aa8.34□□□□□ -1.07
LRRC28-211ENST00000558890 GPC3P51654 580 aa8.34□□□□□ -1.07
LRRC28-211ENST00000558890 CLCN6P51797 869 aa8.34□□□□□ -1.07
LRRC28-211ENST00000558890 CRYBB1P53674 252 aaPredicted RBP8.34□□□□□ -1.07
LRRC28-211ENST00000558890 PTENP60484 403 aa8.34□□□□□ -1.07
LRRC28-211ENST00000558890 IGBP1P78318 339 aa8.34□□□□□ -1.07
LRRC28-211ENST00000558890 MRPS6P82932 125 aaKnown RBP8.34□□□□□ -1.07
LRRC28-211ENST00000558890 CKAP4Q07065 602 aaKnown RBP8.34□□□□□ -1.07
LRRC28-211ENST00000558890 LAMTOR4Q0VGL1 99 aa8.34□□□□□ -1.07
LRRC28-211ENST00000558890 MYBPC2Q14324 1141 aa8.34□□□□□ -1.07
LRRC28-211ENST00000558890 LPIN1Q14693 890 aa8.34□□□□□ -1.07
LRRC28-211ENST00000558890 NFIL3Q16649 462 aa8.34□□□□□ -1.07
LRRC28-211ENST00000558890 PLEKHG4Q58EX7 1191 aa8.34□□□□□ -1.07
LRRC28-211ENST00000558890 HERC4Q5GLZ8 1057 aaPredicted RBP8.34□□□□□ -1.07
LRRC28-211ENST00000558890 MIIPQ5JXC2 388 aa8.34□□□□□ -1.07
LRRC28-211ENST00000558890 FBXO47Q5MNV8 452 aa8.34□□□□□ -1.07
LRRC28-211ENST00000558890 CCDC122Q5T0U0 273 aa8.34□□□□□ -1.07
LRRC28-211ENST00000558890 FAM109BQ6ICB4 259 aaPredicted RBP8.34□□□□□ -1.07
LRRC28-211ENST00000558890 ZPBP2Q6X784 338 aa8.34□□□□□ -1.07
LRRC28-211ENST00000558890 LRRC55Q6ZSA7 311 aa8.34□□□□□ -1.07
LRRC28-211ENST00000558890 LRRC8DQ7L1W4 858 aa8.34□□□□□ -1.07
LRRC28-211ENST00000558890 EPM2AIP1Q7L775 607 aaPredicted RBP8.34□□□□□ -1.07
LRRC28-211ENST00000558890 CACNA2D4Q7Z3S7 1137 aa8.34□□□□□ -1.07
LRRC28-211ENST00000558890 ZBTB8OSQ8IWT0 167 aa8.34□□□□□ -1.07
LRRC28-211ENST00000558890 FAM178BQ8IXR5 827 aa8.34□□□□□ -1.07
LRRC28-211ENST00000558890 GOLGA5Q8TBA6 731 aa8.34□□□□□ -1.07
LRRC28-211ENST00000558890 UBE2Q2Q8WVN8 375 aa8.34□□□□□ -1.07
LRRC28-211ENST00000558890 TMEM40Q8WWA1 233 aa8.34□□□□□ -1.07
LRRC28-211ENST00000558890 HPS3Q969F9 1004 aa8.34□□□□□ -1.07
LRRC28-211ENST00000558890 KIF12Q96FN5 646 aa8.34□□□□□ -1.07
LRRC28-211ENST00000558890 CCDC42Q96M95 316 aa8.34□□□□□ -1.07
LRRC28-211ENST00000558890 EIF3CQ99613 913 aaKnown RBP8.34□□□□□ -1.07
LRRC28-211ENST00000558890 CHP1Q99653 195 aa8.34□□□□□ -1.07
LRRC28-211ENST00000558890 LBHD1Q9BQE6 289 aaPredicted RBP8.34□□□□□ -1.07
LRRC28-211ENST00000558890 SH2D3AQ9BRG2 576 aa8.34□□□□□ -1.07
LRRC28-211ENST00000558890 TRAIPQ9BWF2 469 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms