RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 PBX3P40426 434 aa10.95□□□□□ -0.66
SPG11-212ENST00000558790 KCNC3Q14003 757 aa10.95□□□□□ -0.66
SPG11-212ENST00000558790 LCE2CQ5TA81 110 aa10.95□□□□□ -0.66
SPG11-212ENST00000558790 FAM160B1Q5W0V3 765 aa10.95□□□□□ -0.66
SPG11-212ENST00000558790 CREB3L3Q68CJ9 461 aa10.95□□□□□ -0.66
SPG11-212ENST00000558790 LLGL2Q6P1M3 1020 aa10.95□□□□□ -0.66
SPG11-212ENST00000558790 APOA5Q6Q788 366 aa10.95□□□□□ -0.66
SPG11-212ENST00000558790 ABHD15Q6UXT9 468 aa10.95□□□□□ -0.66
SPG11-212ENST00000558790 SLC24A5Q71RS6 500 aa10.95□□□□□ -0.66
SPG11-212ENST00000558790 TCF25Q9BQ70 676 aa10.95□□□□□ -0.66
SPG11-212ENST00000558790 APOL5Q9BWW9 433 aa10.95□□□□□ -0.66
SPG11-212ENST00000558790 ENTPD7Q9NQZ7 604 aa10.95□□□□□ -0.66
SPG11-212ENST00000558790 ZNF302Q9NR11 478 aa10.95□□□□□ -0.66
SPG11-212ENST00000558790 RNF19AQ9NV58 838 aa10.95□□□□□ -0.66
SPG11-212ENST00000558790 CDH22Q9UJ99 828 aa10.95□□□□□ -0.66
SPG11-212ENST00000558790 DOCK8Q8NF50 2099 aa10.94□□□□□ -0.66
SPG11-212ENST00000558790 TDRD15B5MCY1 1934 aaKnown RBP10.94□□□□□ -0.66
SPG11-212ENST00000558790 IGLV3-22A0A075B6J6 115 aa10.94□□□□□ -0.66
SPG11-212ENST00000558790 HIDE1A8MVS5 230 aa10.94□□□□□ -0.66
SPG11-212ENST00000558790 FAM86B1E9PN63 330 aa10.94□□□□□ -0.66
SPG11-212ENST00000558790 GPR182O15218 404 aa10.94□□□□□ -0.66
SPG11-212ENST00000558790 FOSP01100 380 aaPredicted RBP10.94□□□□□ -0.66
SPG11-212ENST00000558790 PDGFAP04085 211 aa10.94□□□□□ -0.66
SPG11-212ENST00000558790 FAM86B2P0C5J1 330 aa10.94□□□□□ -0.66
SPG11-212ENST00000558790 SRGAP2BP0DMP2 458 aa10.94□□□□□ -0.66
SPG11-212ENST00000558790 VSIG8P0DPA2 414 aa10.94□□□□□ -0.66
SPG11-212ENST00000558790 TECP42680 631 aa10.94□□□□□ -0.66
SPG11-212ENST00000558790 CTBSQ01459 385 aa10.94□□□□□ -0.66
SPG11-212ENST00000558790 AP3B2Q13367 1082 aa10.94□□□□□ -0.66
SPG11-212ENST00000558790 TRIP4Q15650 581 aaPredicted RBP10.94□□□□□ -0.66
SPG11-212ENST00000558790 ANKRD54Q6NXT1 300 aa10.94□□□□□ -0.66
SPG11-212ENST00000558790 SYCE2Q6PIF2 218 aa10.94□□□□□ -0.66
SPG11-212ENST00000558790 TMEM184AQ6ZMB5 413 aa10.94□□□□□ -0.66
SPG11-212ENST00000558790 LRRC55Q6ZSA7 311 aa10.94□□□□□ -0.66
SPG11-212ENST00000558790 TMEM105Q8N8V8 129 aa10.94□□□□□ -0.66
SPG11-212ENST00000558790 MRPS27Q92552 414 aaKnown RBP10.94□□□□□ -0.66
SPG11-212ENST00000558790 NKD2Q969F2 451 aaPredicted RBP10.94□□□□□ -0.66
SPG11-212ENST00000558790 IRF2BPLQ9H1B7 796 aa10.94□□□□□ -0.66
SPG11-212ENST00000558790 S1PR5Q9H228 398 aa10.94□□□□□ -0.66
SPG11-212ENST00000558790 ATP6V0A4Q9HBG4 840 aa10.94□□□□□ -0.66
SPG11-212ENST00000558790 TMEM161AQ9NX61 479 aa10.94□□□□□ -0.66
SPG11-212ENST00000558790 MARK1Q9P0L2 795 aa10.94□□□□□ -0.66
SPG11-212ENST00000558790 LZTS1Q9Y250 596 aa10.94□□□□□ -0.66
SPG11-212ENST00000558790 GPR179Q6PRD1 2367 aa10.93□□□□□ -0.66
SPG11-212ENST00000558790 DHX15O43143 795 aaKnown RBP10.93□□□□□ -0.66
SPG11-212ENST00000558790 GPR32O75388 356 aa10.93□□□□□ -0.66
SPG11-212ENST00000558790 CLCN3P51790 818 aa10.93□□□□□ -0.66
SPG11-212ENST00000558790 CRYBB1P53674 252 aaPredicted RBP10.93□□□□□ -0.66
SPG11-212ENST00000558790 PLCB3Q01970 1234 aa10.93□□□□□ -0.66
SPG11-212ENST00000558790 DSC3Q14574 896 aa10.93□□□□□ -0.66
SPG11-212ENST00000558790 NECTIN1Q15223 517 aa10.93□□□□□ -0.66
SPG11-212ENST00000558790 ZNF484Q5JVG2 852 aa10.93□□□□□ -0.66
SPG11-212ENST00000558790 RNFT1Q5M7Z0 435 aa10.93□□□□□ -0.66
SPG11-212ENST00000558790 ODR4Q5SWX8 454 aa10.93□□□□□ -0.66
SPG11-212ENST00000558790 PDE12Q6L8Q7 609 aaKnown RBP10.93□□□□□ -0.66
SPG11-212ENST00000558790 MIS18BP1Q6P0N0 1132 aa10.93□□□□□ -0.66
SPG11-212ENST00000558790 NIPA1Q7RTP0 329 aa10.93□□□□□ -0.66
SPG11-212ENST00000558790 RAB44Q7Z6P3 723 aaPredicted RBP10.93□□□□□ -0.66
SPG11-212ENST00000558790 PLA2G4DQ86XP0 818 aa10.93□□□□□ -0.66
SPG11-212ENST00000558790 TEX2Q8IWB9 1127 aa10.93□□□□□ -0.66
SPG11-212ENST00000558790 LRRC43Q8N309 656 aa10.93□□□□□ -0.66
SPG11-212ENST00000558790 METTL13Q8N6R0 699 aa10.93□□□□□ -0.66
SPG11-212ENST00000558790 RASGRP4Q8TDF6 673 aa10.93□□□□□ -0.66
SPG11-212ENST00000558790 TCEANC2Q96MN5 208 aa10.93□□□□□ -0.66
SPG11-212ENST00000558790 CASD1Q96PB1 797 aa10.93□□□□□ -0.66
SPG11-212ENST00000558790 ELAC1Q9H777 363 aaKnown RBP10.93□□□□□ -0.66
SPG11-212ENST00000558790 RBM28Q9NW13 759 aaKnown RBP10.93□□□□□ -0.66
SPG11-212ENST00000558790 BARHL2Q9NY43 387 aa10.93□□□□□ -0.66
SPG11-212ENST00000558790 KCNMB2Q9Y691 235 aa10.93□□□□□ -0.66
SPG11-212ENST00000558790 MTCL1Q9Y4B5 1905 aaKnown RBP10.92□□□□□ -0.66
SPG11-212ENST00000558790 SMCO2A6NFE2 343 aa10.92□□□□□ -0.66
SPG11-212ENST00000558790 A6NHS1 94 aa10.92□□□□□ -0.66
SPG11-212ENST00000558790 hCG_1984214I3L0E3 225 aa10.92□□□□□ -0.66
SPG11-212ENST00000558790 IPO5O00410 1097 aaKnown RBP10.92□□□□□ -0.66
SPG11-212ENST00000558790 ADAMTS3O15072 1205 aa10.92□□□□□ -0.66
SPG11-212ENST00000558790 EPB42P16452 691 aa10.92□□□□□ -0.66
SPG11-212ENST00000558790 MZF1P28698 734 aaPredicted RBP10.92□□□□□ -0.66
SPG11-212ENST00000558790 PPM1AP35813 382 aa10.92□□□□□ -0.66
SPG11-212ENST00000558790 ZNF76P36508 570 aa10.92□□□□□ -0.66
SPG11-212ENST00000558790 FAM189BP81408 668 aa10.92□□□□□ -0.66
SPG11-212ENST00000558790 ST3GAL2Q16842 350 aa10.92□□□□□ -0.66
SPG11-212ENST00000558790 CLLU1OSQ5K130 101 aa10.92□□□□□ -0.66
SPG11-212ENST00000558790 JAKMIP3Q5VZ66 844 aa10.92□□□□□ -0.66
SPG11-212ENST00000558790 SWSAP1Q6NVH7 229 aa10.92□□□□□ -0.66
SPG11-212ENST00000558790 KCNT2Q6UVM3 1135 aa10.92□□□□□ -0.66
SPG11-212ENST00000558790 FAM43BQ6ZT52 329 aaPredicted RBP10.92□□□□□ -0.66
SPG11-212ENST00000558790 TRMT1LQ7Z2T5 733 aaKnown RBP10.92□□□□□ -0.66
SPG11-212ENST00000558790 CKAP2LQ8IYA6 745 aa10.92□□□□□ -0.66
SPG11-212ENST00000558790 KIAA2013Q8IYS2 634 aa10.92□□□□□ -0.66
SPG11-212ENST00000558790 ZNF713Q8N859 430 aaPredicted RBP10.92□□□□□ -0.66
SPG11-212ENST00000558790 CRYGNQ8WXF5 182 aa10.92□□□□□ -0.66
SPG11-212ENST00000558790 PIK3R5Q8WYR1 880 aa10.92□□□□□ -0.66
SPG11-212ENST00000558790 IRF7Q92985 503 aa10.92□□□□□ -0.66
SPG11-212ENST00000558790 SLC30A3Q99726 388 aa10.92□□□□□ -0.66
SPG11-212ENST00000558790 TMEM117Q9H0C3 514 aa10.92□□□□□ -0.66
SPG11-212ENST00000558790 BRPF3Q9ULD4 1205 aa10.92□□□□□ -0.66
SPG11-212ENST00000558790 FANCMQ8IYD8 2048 aa10.91□□□□□ -0.66
SPG11-212ENST00000558790 GOLGA8AA7E2F4 631 aa10.91□□□□□ -0.66
SPG11-212ENST00000558790 GOLGA8BA8MQT2 603 aa10.91□□□□□ -0.66
SPG11-212ENST00000558790 ZBTB43O43298 467 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms