RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 CCT8L2Q96SF2 557 aa14.74□□□□□ -0.05
SPG11-210ENST00000558319 TEX33O43247 280 aa14.74□□□□□ -0.05
SPG11-210ENST00000558319 GRAP2O75791 330 aa14.74□□□□□ -0.05
SPG11-210ENST00000558319 PRCPP42785 496 aa14.74□□□□□ -0.05
SPG11-210ENST00000558319 CENPAP49450 140 aa14.74□□□□□ -0.05
SPG11-210ENST00000558319 GPC5P78333 572 aa14.74□□□□□ -0.05
SPG11-210ENST00000558319 CEP95Q96GE4 821 aa14.74□□□□□ -0.05
SPG11-210ENST00000558319 BRD8Q9H0E9 1235 aa14.74□□□□□ -0.05
SPG11-210ENST00000558319 MRPL42Q9Y6G3 142 aaKnown RBP14.74□□□□□ -0.05
SPG11-210ENST00000558319 LZTS3O60299 673 aaPredicted RBP14.74□□□□□ -0.05
SPG11-210ENST00000558319 LVRNQ6Q4G3 990 aa14.74□□□□□ -0.05
SPG11-210ENST00000558319 CCDC103Q8IW40 242 aa14.74□□□□□ -0.05
SPG11-210ENST00000558319 YAF2Q8IY57 180 aa14.74□□□□□ -0.05
SPG11-210ENST00000558319 TEX9Q8N6V9 391 aa14.74□□□□□ -0.05
SPG11-210ENST00000558319 EPAS1Q99814 870 aa14.74□□□□□ -0.05
SPG11-210ENST00000558319 COPG1Q9Y678 874 aaKnown RBP14.74□□□□□ -0.05
SPG11-210ENST00000558319 V9GYQ6 96 aa14.74□□□□□ -0.05
SPG11-210ENST00000558319 HMGXB3Q12766 1538 aa14.74□□□□□ -0.05
SPG11-210ENST00000558319 TRIM49P0CI25 452 aa14.74□□□□□ -0.05
SPG11-210ENST00000558319 TRIM49CP0CI26 452 aa14.74□□□□□ -0.05
SPG11-210ENST00000558319 CYP2C19P33261 490 aa14.74□□□□□ -0.05
SPG11-210ENST00000558319 NR1H3Q13133 447 aa14.74□□□□□ -0.05
SPG11-210ENST00000558319 PADI6Q6TGC4 694 aa14.74□□□□□ -0.05
SPG11-210ENST00000558319 DHX40Q8IX18 779 aaKnown RBP14.74□□□□□ -0.05
SPG11-210ENST00000558319 MYOM2P54296 1465 aa14.74□□□□□ -0.05
SPG11-210ENST00000558319 WDR62O43379 1518 aa14.74□□□□□ -0.05
SPG11-210ENST00000558319 MYO1GB0I1T2 1018 aa14.74□□□□□ -0.05
SPG11-210ENST00000558319 NFIBO00712 420 aa14.74□□□□□ -0.05
SPG11-210ENST00000558319 CCDC22O60826 627 aa14.74□□□□□ -0.05
SPG11-210ENST00000558319 PDGFRBP09619 1106 aa14.74□□□□□ -0.05
SPG11-210ENST00000558319 PATL1Q86TB9 770 aaKnown RBP14.74□□□□□ -0.05
SPG11-210ENST00000558319 MTBPQ96DY7 904 aa14.74□□□□□ -0.05
SPG11-210ENST00000558319 SNF8Q96H20 258 aa14.74□□□□□ -0.05
SPG11-210ENST00000558319 ABHD8Q96I13 439 aa14.74□□□□□ -0.05
SPG11-210ENST00000558319 SEC16BQ96JE7 1060 aa14.74□□□□□ -0.05
SPG11-210ENST00000558319 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.74□□□□□ -0.051e-6■■■■□ 19.3
SPG11-210ENST00000558319 BRIP1Q9BX63 1249 aa14.74□□□□□ -0.05
SPG11-210ENST00000558319 CEP72Q9P209 647 aa14.74□□□□□ -0.05
SPG11-210ENST00000558319 ZNF772Q68DY9 489 aaPredicted RBP14.73□□□□□ -0.05
SPG11-210ENST00000558319 ZNF564Q8TBZ8 553 aaPredicted RBP14.73□□□□□ -0.05
SPG11-210ENST00000558319 COG1Q8WTW3 980 aa14.73□□□□□ -0.05
SPG11-210ENST00000558319 EME1Q96AY2 570 aa14.73□□□□□ -0.05
SPG11-210ENST00000558319 CYLC2Q14093 348 aaPredicted RBP14.73□□□□□ -0.05
SPG11-210ENST00000558319 DNAJC9Q8WXX5 260 aa14.73□□□□□ -0.05
SPG11-210ENST00000558319 CCT7Q99832 543 aa14.73□□□□□ -0.05
SPG11-210ENST00000558319 LRRC74AQ0VAA2 488 aa14.73□□□□□ -0.05
SPG11-210ENST00000558319 A8MXQ7 604 aa14.73□□□□□ -0.05
SPG11-210ENST00000558319 DLGAP3O95886 979 aa14.73□□□□□ -0.05
SPG11-210ENST00000558319 IL6STP40189 918 aaPredicted RBP14.73□□□□□ -0.05
SPG11-210ENST00000558319 PPP3CCP48454 512 aa14.73□□□□□ -0.05
SPG11-210ENST00000558319 PLOD1Q02809 727 aaPredicted RBP14.73□□□□□ -0.05
SPG11-210ENST00000558319 MAPK6Q16659 721 aa14.73□□□□□ -0.05
SPG11-210ENST00000558319 KIRREL3Q8IZU9 778 aa14.73□□□□□ -0.05
SPG11-210ENST00000558319 ATP11CQ8NB49 1132 aa14.73□□□□□ -0.05
SPG11-210ENST00000558319 SLC30A5Q8TAD4 765 aa14.73□□□□□ -0.05
SPG11-210ENST00000558319 GFM2Q969S9 779 aaKnown RBP14.73□□□□□ -0.05
SPG11-210ENST00000558319 ARL2BPQ9Y2Y0 163 aa14.73□□□□□ -0.05
SPG11-210ENST00000558319 POLRMTO00411 1230 aaKnown RBP14.73□□□□□ -0.05
SPG11-210ENST00000558319 DGKIO75912 1065 aa14.73□□□□□ -0.05
SPG11-210ENST00000558319 GRK2P25098 689 aa14.73□□□□□ -0.05
SPG11-210ENST00000558319 SMARCA1P28370 1054 aa14.73□□□□□ -0.05
SPG11-210ENST00000558319 LRRC63Q05C16 580 aa14.73□□□□□ -0.05
SPG11-210ENST00000558319 SARM1Q6SZW1 724 aa14.73□□□□□ -0.05
SPG11-210ENST00000558319 RAET1EQ8TD07 263 aa14.73□□□□□ -0.05
SPG11-210ENST00000558319 KIF24Q5T7B8 1368 aa14.72□□□□□ -0.05
SPG11-210ENST00000558319 RNF123Q5XPI4 1314 aa14.72□□□□□ -0.05
SPG11-210ENST00000558319 KCNQ2O43526 872 aa14.72□□□□□ -0.05
SPG11-210ENST00000558319 KCNA2P16389 499 aa14.72□□□□□ -0.05
SPG11-210ENST00000558319 HNRNPH1P31943 449 aaKnown RBP14.72□□□□□ -0.05
SPG11-210ENST00000558319 IZUMO3Q5VZ72 239 aa14.72□□□□□ -0.05
SPG11-210ENST00000558319 CELF1Q92879 486 aaKnown RBP14.72□□□□□ -0.05
SPG11-210ENST00000558319 MAST1Q9Y2H9 1570 aa14.72□□□□□ -0.05
SPG11-210ENST00000558319 BBOX1O75936 387 aa14.72□□□□□ -0.05
SPG11-210ENST00000558319 GNA15P30679 374 aa14.72□□□□□ -0.05
SPG11-210ENST00000558319 PRELPP51888 382 aa14.72□□□□□ -0.05
SPG11-210ENST00000558319 ADGRF4Q8IZF3 695 aa14.72□□□□□ -0.05
SPG11-210ENST00000558319 MASTLQ96GX5 879 aa14.72□□□□□ -0.05
SPG11-210ENST00000558319 IRX2Q9BZI1 471 aaPredicted RBP14.72□□□□□ -0.05
SPG11-210ENST00000558319 STMN3Q9NZ72 180 aa14.72□□□□□ -0.05
SPG11-210ENST00000558319 KDM5AP29375 1690 aaKnown RBP14.72□□□□□ -0.05
SPG11-210ENST00000558319 LGALS16A8MUM7 142 aa14.72□□□□□ -0.05
SPG11-210ENST00000558319 SERPINB1P30740 379 aa14.72□□□□□ -0.05
SPG11-210ENST00000558319 PTPN12Q05209 780 aaKnown RBP14.72□□□□□ -0.05
SPG11-210ENST00000558319 DMPKQ09013 629 aa14.72□□□□□ -0.05
SPG11-210ENST00000558319 FAM96AQ9H5X1 160 aa14.72□□□□□ -0.05
SPG11-210ENST00000558319 RPAP3Q9H6T3 665 aaPredicted RBP14.72□□□□□ -0.05
SPG11-210ENST00000558319 SLC40A1Q9NP59 571 aa14.72□□□□□ -0.05
SPG11-210ENST00000558319 RNF146Q9NTX7 359 aa14.72□□□□□ -0.05
SPG11-210ENST00000558319 CHORDC1Q9UHD1 332 aaPredicted RBP14.72□□□□□ -0.05
SPG11-210ENST00000558319 EIF3HO15372 352 aaKnown RBP eCLIP14.72□□□□□ -0.052e-6■■■■□ 21.2
SPG11-210ENST00000558319 PPP1R37O75864 691 aa14.72□□□□□ -0.05
SPG11-210ENST00000558319 ETFBP38117 255 aa14.72□□□□□ -0.05
SPG11-210ENST00000558319 PWP1Q13610 501 aa14.72□□□□□ -0.05
SPG11-210ENST00000558319 KIZQ2M2Z5 673 aa14.72□□□□□ -0.05
SPG11-210ENST00000558319 PIN4Q9Y237 131 aaKnown RBP14.72□□□□□ -0.05
SPG11-210ENST00000558319 FAM102AQ5T9C2 384 aaPredicted RBP14.72□□□□□ -0.05
SPG11-210ENST00000558319 RC3H1Q5TC82 1133 aaKnown RBP14.72□□□□□ -0.05
SPG11-210ENST00000558319 CCDC81Q6ZN84 652 aa14.72□□□□□ -0.05
SPG11-210ENST00000558319 HDDC2Q7Z4H3 204 aa14.72□□□□□ -0.05
SPG11-210ENST00000558319 SCG3Q8WXD2 468 aaKnown RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms