RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 GLRA4Q5JXX5 417 aa9.82□□□□□ -0.84
SPG11-207ENST00000558138 L1TD1Q5T7N2 865 aaKnown RBP9.82□□□□□ -0.84
SPG11-207ENST00000558138 ZPBP2Q6X784 338 aa9.82□□□□□ -0.84
SPG11-207ENST00000558138 TAS1R3Q7RTX0 852 aa9.82□□□□□ -0.84
SPG11-207ENST00000558138 ZNF280BQ86YH2 543 aa9.82□□□□□ -0.84
SPG11-207ENST00000558138 SLC39A11Q8N1S5 342 aa9.82□□□□□ -0.84
SPG11-207ENST00000558138 SPPL3Q8TCT6 385 aa9.82□□□□□ -0.84
SPG11-207ENST00000558138 ZBTB45Q96K62 511 aaPredicted RBP9.82□□□□□ -0.84
SPG11-207ENST00000558138 ACCSQ96QU6 501 aa9.82□□□□□ -0.84
SPG11-207ENST00000558138 TMEM175Q9BSA9 504 aa9.82□□□□□ -0.84
SPG11-207ENST00000558138 MSTO1Q9BUK6 570 aa9.82□□□□□ -0.84
SPG11-207ENST00000558138 COLEC11Q9BWP8 271 aa9.82□□□□□ -0.84
SPG11-207ENST00000558138 TRIM9Q9C026 710 aa9.82□□□□□ -0.84
SPG11-207ENST00000558138 EXOC1Q9NV70 894 aa9.82□□□□□ -0.84
SPG11-207ENST00000558138 CHMP5Q9NZZ3 219 aa9.82□□□□□ -0.84
SPG11-207ENST00000558138 THEGQ9P2T0 379 aa9.82□□□□□ -0.84
SPG11-207ENST00000558138 DNAJB4Q9UDY4 337 aa9.82□□□□□ -0.84
SPG11-207ENST00000558138 USP25Q9UHP3 1055 aa9.82□□□□□ -0.84
SPG11-207ENST00000558138 PCDHB13Q9Y5F0 798 aa9.82□□□□□ -0.84
SPG11-207ENST00000558138 TDRD15B5MCY1 1934 aaKnown RBP9.82□□□□□ -0.84
SPG11-207ENST00000558138 TCHHQ07283 1943 aa9.82□□□□□ -0.84
SPG11-207ENST00000558138 DDHD2O94830 711 aa9.81□□□□□ -0.84
SPG11-207ENST00000558138 GALTP07902 379 aa9.81□□□□□ -0.84
SPG11-207ENST00000558138 LINC00271P0C7V0 271 aa9.81□□□□□ -0.84
SPG11-207ENST00000558138 SRGAP2BP0DMP2 458 aa9.81□□□□□ -0.84
SPG11-207ENST00000558138 MYBP10242 640 aa9.81□□□□□ -0.84
SPG11-207ENST00000558138 CASP1P29466 404 aa9.81□□□□□ -0.84
SPG11-207ENST00000558138 GRM5P41594 1212 aa9.81□□□□□ -0.84
SPG11-207ENST00000558138 AFF1P51825 1210 aaKnown RBP9.81□□□□□ -0.84
SPG11-207ENST00000558138 NDUFA8P51970 172 aa9.81□□□□□ -0.84
SPG11-207ENST00000558138 PLCB3Q01970 1234 aa9.81□□□□□ -0.84
SPG11-207ENST00000558138 PPP2R3AQ06190 1150 aa9.81□□□□□ -0.84
SPG11-207ENST00000558138 SMC1AQ14683 1233 aaKnown RBP9.81□□□□□ -0.84
SPG11-207ENST00000558138 KYAT1Q16773 422 aa9.81□□□□□ -0.84
SPG11-207ENST00000558138 SEZ6Q53EL9 994 aa9.81□□□□□ -0.84
SPG11-207ENST00000558138 SLFN12LQ6IEE8 588 aa9.81□□□□□ -0.84
SPG11-207ENST00000558138 KIAA1841Q6NSI8 718 aa9.81□□□□□ -0.84
SPG11-207ENST00000558138 ZNF720Q7Z2F6 126 aa9.81□□□□□ -0.84
SPG11-207ENST00000558138 RBM23Q86U06 439 aaKnown RBP9.81□□□□□ -0.84
SPG11-207ENST00000558138 GRAMD1CQ8IYS0 662 aa9.81□□□□□ -0.84
SPG11-207ENST00000558138 CEP120Q8N960 986 aa9.81□□□□□ -0.84
SPG11-207ENST00000558138 HASPINQ8TF76 798 aa9.81□□□□□ -0.84
SPG11-207ENST00000558138 POMGNT1Q8WZA1 660 aa9.81□□□□□ -0.84
SPG11-207ENST00000558138 HVCN1Q96D96 273 aa9.81□□□□□ -0.84
SPG11-207ENST00000558138 DNAJC19Q96DA6 116 aa9.81□□□□□ -0.84
SPG11-207ENST00000558138 TLE6Q9H808 572 aa9.81□□□□□ -0.84
SPG11-207ENST00000558138 KBTBD4Q9NVX7 518 aa9.81□□□□□ -0.84
SPG11-207ENST00000558138 CLDND1Q9NY35 253 aa9.81□□□□□ -0.84
SPG11-207ENST00000558138 PLXNA4Q9HCM2 1894 aa9.81□□□□□ -0.84
SPG11-207ENST00000558138 ZMYM2Q9UBW7 1377 aa9.8□□□□□ -0.84
SPG11-207ENST00000558138 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.8□□□□□ -0.84
SPG11-207ENST00000558138 A0A1W2PQ27 194 aa9.8□□□□□ -0.84
SPG11-207ENST00000558138 A0A1W2PQ64 194 aa9.8□□□□□ -0.84
SPG11-207ENST00000558138 A0A1W2PQD8 194 aa9.8□□□□□ -0.84
SPG11-207ENST00000558138 C2CD2LO14523 706 aa9.8□□□□□ -0.84
SPG11-207ENST00000558138 NRP1O14786 923 aa9.8□□□□□ -0.84
SPG11-207ENST00000558138 TADA2AO75478 443 aa9.8□□□□□ -0.84
SPG11-207ENST00000558138 PRPF6O94906 941 aaKnown RBP9.8□□□□□ -0.84
SPG11-207ENST00000558138 URODP06132 367 aa9.8□□□□□ -0.84
SPG11-207ENST00000558138 SLFN14P0C7P3 912 aa9.8□□□□□ -0.84
SPG11-207ENST00000558138 CXCL8P10145 99 aa9.8□□□□□ -0.84
SPG11-207ENST00000558138 POU3F3P20264 500 aaPredicted RBP9.8□□□□□ -0.84
SPG11-207ENST00000558138 DNAJB1P25685 340 aa9.8□□□□□ -0.84
SPG11-207ENST00000558138 IRS1P35568 1242 aa9.8□□□□□ -0.84
SPG11-207ENST00000558138 NRIP1P48552 1158 aa9.8□□□□□ -0.84
SPG11-207ENST00000558138 NDUFV1P49821 464 aa9.8□□□□□ -0.84
SPG11-207ENST00000558138 GTF2BQ00403 316 aa9.8□□□□□ -0.84
SPG11-207ENST00000558138 MCL1Q07820 350 aa9.8□□□□□ -0.84
SPG11-207ENST00000558138 TUSC3Q13454 348 aa9.8□□□□□ -0.84
SPG11-207ENST00000558138 CUL4BQ13620 913 aa9.8□□□□□ -0.84
SPG11-207ENST00000558138 AAK1Q2M2I8 961 aa9.8□□□□□ -0.84
SPG11-207ENST00000558138 FAM26FQ5R3K3 315 aa9.8□□□□□ -0.84
SPG11-207ENST00000558138 PDE12Q6L8Q7 609 aaKnown RBP9.8□□□□□ -0.84
SPG11-207ENST00000558138 UNC13DQ70J99 1090 aa9.8□□□□□ -0.84
SPG11-207ENST00000558138 MAP4K3Q8IVH8 894 aa9.8□□□□□ -0.84
SPG11-207ENST00000558138 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.8□□□□□ -0.84
SPG11-207ENST00000558138 COLGALT2Q8IYK4 626 aa9.8□□□□□ -0.84
SPG11-207ENST00000558138 VPS52Q8N1B4 723 aa9.8□□□□□ -0.84
SPG11-207ENST00000558138 RABGGTAQ92696 567 aa9.8□□□□□ -0.84
SPG11-207ENST00000558138 HLA-CQ95604 372 aa9.8□□□□□ -0.84
SPG11-207ENST00000558138 IGSF21Q96ID5 467 aa9.8□□□□□ -0.84
SPG11-207ENST00000558138 C7orf25Q9BPX7 421 aa9.8□□□□□ -0.84
SPG11-207ENST00000558138 TMEM206Q9H813 350 aa9.8□□□□□ -0.84
SPG11-207ENST00000558138 RPF1Q9H9Y2 349 aaKnown RBP9.8□□□□□ -0.84
SPG11-207ENST00000558138 NGRNQ9NPE2 291 aaKnown RBP9.8□□□□□ -0.84
SPG11-207ENST00000558138 PRDM6Q9NQX0 595 aa9.8□□□□□ -0.84
SPG11-207ENST00000558138 OLFML3Q9NRN5 406 aa9.8□□□□□ -0.84
SPG11-207ENST00000558138 SLC38A7Q9NVC3 462 aa9.8□□□□□ -0.84
SPG11-207ENST00000558138 MIOSQ9NXC5 875 aa9.8□□□□□ -0.84
SPG11-207ENST00000558138 STK39Q9UEW8 545 aa9.8□□□□□ -0.84
SPG11-207ENST00000558138 HOOK1Q9UJC3 728 aaKnown RBP9.8□□□□□ -0.84
SPG11-207ENST00000558138 LZTS1Q9Y250 596 aa9.8□□□□□ -0.84
SPG11-207ENST00000558138 PCDHGC5Q9Y5F6 944 aa9.8□□□□□ -0.84
SPG11-207ENST00000558138 PER2O15055 1255 aa9.79□□□□□ -0.84
SPG11-207ENST00000558138 OGTO15294 1046 aa9.79□□□□□ -0.84
SPG11-207ENST00000558138 XPOTO43592 962 aaKnown RBP9.79□□□□□ -0.84
SPG11-207ENST00000558138 NCK2O43639 380 aa9.79□□□□□ -0.84
SPG11-207ENST00000558138 CXCL14O95715 111 aa9.79□□□□□ -0.84
SPG11-207ENST00000558138 CLTAP09496 248 aa9.79□□□□□ -0.84
SPG11-207ENST00000558138 PROZP22891 400 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms