RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 AKAP3O75969 853 aa13.49□□□□□ -0.25
TPM1-209ENST00000558072 GHRP10912 638 aa13.49□□□□□ -0.25
TPM1-209ENST00000558072 GRM5P41594 1212 aa13.49□□□□□ -0.25
TPM1-209ENST00000558072 MCCD1P59942 119 aaPredicted RBP13.49□□□□□ -0.25
TPM1-209ENST00000558072 BFSP1Q12934 665 aa13.49□□□□□ -0.25
TPM1-209ENST00000558072 GPNMBQ14956 572 aa13.49□□□□□ -0.25
TPM1-209ENST00000558072 TWF2Q6IBS0 349 aaKnown RBP13.49□□□□□ -0.25
TPM1-209ENST00000558072 SLC39A4Q6P5W5 647 aa13.49□□□□□ -0.25
TPM1-209ENST00000558072 FAM228AQ86W67 206 aa13.49□□□□□ -0.25
TPM1-209ENST00000558072 TRIM59Q8IWR1 403 aa13.49□□□□□ -0.25
TPM1-209ENST00000558072 RPUSD2Q8IZ73 545 aaKnown RBP13.49□□□□□ -0.25
TPM1-209ENST00000558072 MFSD14AQ96MC6 490 aa13.49□□□□□ -0.25
TPM1-209ENST00000558072 ACAP3Q96P50 834 aa13.49□□□□□ -0.25
TPM1-209ENST00000558072 FAM213AQ9BRX8 229 aa13.49□□□□□ -0.25
TPM1-209ENST00000558072 PCIF1Q9H4Z3 704 aa13.49□□□□□ -0.25
TPM1-209ENST00000558072 ASB7Q9H672 318 aa13.49□□□□□ -0.25
TPM1-209ENST00000558072 ERVK-5Q9HDB9 667 aa13.49□□□□□ -0.25
TPM1-209ENST00000558072 PADI3Q9ULW8 664 aa13.49□□□□□ -0.25
TPM1-209ENST00000558072 TISP43B9A030 160 aa13.48□□□□□ -0.25
TPM1-209ENST00000558072 PES1O00541 588 aaKnown RBP13.48□□□□□ -0.25
TPM1-209ENST00000558072 KIAA0355O15063 1070 aa13.48□□□□□ -0.25
TPM1-209ENST00000558072 PMM2O15305 246 aa13.48□□□□□ -0.25
TPM1-209ENST00000558072 B4GALT5O43286 388 aa13.48□□□□□ -0.25
TPM1-209ENST00000558072 XPOTO43592 962 aaKnown RBP13.48□□□□□ -0.25
TPM1-209ENST00000558072 IQCF3P0C7M6 154 aa13.48□□□□□ -0.25
TPM1-209ENST00000558072 HOXA11P31270 313 aaPredicted RBP13.48□□□□□ -0.25
TPM1-209ENST00000558072 VAMP7P51809 220 aa13.48□□□□□ -0.25
TPM1-209ENST00000558072 LPIN1Q14693 890 aa13.48□□□□□ -0.25
TPM1-209ENST00000558072 PSMD6Q15008 389 aa13.48□□□□□ -0.25
TPM1-209ENST00000558072 KRT31Q15323 416 aa13.48□□□□□ -0.25
TPM1-209ENST00000558072 VWA3BQ502W6 1294 aa13.48□□□□□ -0.25
TPM1-209ENST00000558072 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.48□□□□□ -0.25
TPM1-209ENST00000558072 ZBTB33Q86T24 672 aa13.48□□□□□ -0.25
TPM1-209ENST00000558072 CDR2LQ86X02 465 aaPredicted RBP13.48□□□□□ -0.25
TPM1-209ENST00000558072 BRSK2Q8IWQ3 736 aa13.48□□□□□ -0.25
TPM1-209ENST00000558072 TMEM199Q8N511 208 aa13.48□□□□□ -0.25
TPM1-209ENST00000558072 CACTINQ8WUQ7 758 aaKnown RBP13.48□□□□□ -0.25
TPM1-209ENST00000558072 MRFAP1L1Q96HT8 127 aa13.48□□□□□ -0.25
TPM1-209ENST00000558072 IFIH1Q9BYX4 1025 aaKnown RBP13.48□□□□□ -0.25
TPM1-209ENST00000558072 CDT1Q9H211 546 aa13.48□□□□□ -0.25
TPM1-209ENST00000558072 AGO3Q9H9G7 860 aaKnown RBP13.48□□□□□ -0.25
TPM1-209ENST00000558072 RBAKQ9NYW8 714 aaPredicted RBP13.48□□□□□ -0.25
TPM1-209ENST00000558072 DAAM1Q9Y4D1 1078 aa13.48□□□□□ -0.25
TPM1-209ENST00000558072 GTPBP10A4D1E9 387 aaKnown RBP13.47□□□□□ -0.25
TPM1-209ENST00000558072 NBNO60934 754 aa13.47□□□□□ -0.25
TPM1-209ENST00000558072 ZNF623O75123 536 aa13.47□□□□□ -0.25
TPM1-209ENST00000558072 EOMESO95936 686 aa13.47□□□□□ -0.25
TPM1-209ENST00000558072 TIMP1P01033 207 aa13.47□□□□□ -0.25
TPM1-209ENST00000558072 AFPP02771 609 aaKnown RBP13.47□□□□□ -0.25
TPM1-209ENST00000558072 TPM1P09493 284 aa13.47□□□□□ -0.25
TPM1-209ENST00000558072 IBSPP21815 317 aaPredicted RBP13.47□□□□□ -0.25
TPM1-209ENST00000558072 CD52P31358 61 aa13.47□□□□□ -0.25
TPM1-209ENST00000558072 COPB1P53618 953 aaKnown RBP13.47□□□□□ -0.25
TPM1-209ENST00000558072 CYP24A1Q07973 514 aa13.47□□□□□ -0.25
TPM1-209ENST00000558072 TCERG1LQ5VWI1 586 aa13.47□□□□□ -0.25
TPM1-209ENST00000558072 SMYD5Q6GMV2 418 aa13.47□□□□□ -0.25
TPM1-209ENST00000558072 DEFB128Q7Z7B8 93 aa13.47□□□□□ -0.25
TPM1-209ENST00000558072 IRF2BP1Q8IU81 584 aa13.47□□□□□ -0.25
TPM1-209ENST00000558072 DPF3Q92784 378 aa13.47□□□□□ -0.25
TPM1-209ENST00000558072 VWCEQ96DN2 955 aa13.47□□□□□ -0.25
TPM1-209ENST00000558072 CPB2Q96IY4 423 aa13.47□□□□□ -0.25
TPM1-209ENST00000558072 FAM81BQ96LP2 452 aa13.47□□□□□ -0.25
TPM1-209ENST00000558072 HSD3B7Q9H2F3 369 aa13.47□□□□□ -0.25
TPM1-209ENST00000558072 NDST4Q9H3R1 872 aa13.47□□□□□ -0.25
TPM1-209ENST00000558072 CPSF3Q9UKF6 684 aaKnown RBP13.47□□□□□ -0.25
TPM1-209ENST00000558072 DERAQ9Y315 318 aa13.47□□□□□ -0.25
TPM1-209ENST00000558072 R3HCC1Q9Y3T6 440 aaKnown RBP13.47□□□□□ -0.25
TPM1-209ENST00000558072 MKI67P46013 3256 aaKnown RBP13.46□□□□□ -0.25
TPM1-209ENST00000558072 A0A0U1RQF3 1178 aa13.46□□□□□ -0.25
TPM1-209ENST00000558072 A0A1B0GTH6 734 aa13.46□□□□□ -0.25
TPM1-209ENST00000558072 A0A1W2PQC6 194 aa13.46□□□□□ -0.25
TPM1-209ENST00000558072 LGALS16A8MUM7 142 aa13.46□□□□□ -0.25
TPM1-209ENST00000558072 ABLIM1O14639 778 aa13.46□□□□□ -0.25
TPM1-209ENST00000558072 HOXA2O43364 376 aa13.46□□□□□ -0.25
TPM1-209ENST00000558072 NPTXRO95502 500 aa13.46□□□□□ -0.25
TPM1-209ENST00000558072 CXCL10P02778 98 aa13.46□□□□□ -0.25
TPM1-209ENST00000558072 STAG3L1P0CL83 205 aa13.46□□□□□ -0.25
TPM1-209ENST00000558072 ACRP10323 421 aa13.46□□□□□ -0.25
TPM1-209ENST00000558072 HARSP12081 509 aaKnown RBP13.46□□□□□ -0.25
TPM1-209ENST00000558072 ACTN1P12814 892 aa13.46□□□□□ -0.25
TPM1-209ENST00000558072 RAG1P15918 1043 aa13.46□□□□□ -0.25
TPM1-209ENST00000558072 CDC25BP30305 580 aa13.46□□□□□ -0.25
TPM1-209ENST00000558072 CASP4P49662 377 aa13.46□□□□□ -0.25
TPM1-209ENST00000558072 PLEKHG4Q58EX7 1191 aa13.46□□□□□ -0.25
TPM1-209ENST00000558072 DCAF17Q5H9S7 520 aaPredicted RBP13.46□□□□□ -0.25
TPM1-209ENST00000558072 SLC24A5Q71RS6 500 aa13.46□□□□□ -0.25
TPM1-209ENST00000558072 WDR49Q8IV35 697 aa13.46□□□□□ -0.25
TPM1-209ENST00000558072 THNSL1Q8IYQ7 743 aa13.46□□□□□ -0.25
TPM1-209ENST00000558072 RDH13Q8NBN7 331 aa13.46□□□□□ -0.25
TPM1-209ENST00000558072 CCDC150Q8NCX0 1101 aa13.46□□□□□ -0.25
TPM1-209ENST00000558072 PARD3BQ8TEW8 1205 aa13.46□□□□□ -0.25
TPM1-209ENST00000558072 SAAL1Q96ER3 474 aa13.46□□□□□ -0.25
TPM1-209ENST00000558072 BORCS6Q96GS4 357 aa13.46□□□□□ -0.25
TPM1-209ENST00000558072 ZBTB45Q96K62 511 aaPredicted RBP13.46□□□□□ -0.25
TPM1-209ENST00000558072 NUP58Q9BVL2 599 aa13.46□□□□□ -0.25
TPM1-209ENST00000558072 RTN4Q9NQC3 1192 aaKnown RBP13.46□□□□□ -0.25
TPM1-209ENST00000558072 FAM105AQ9NUU6 356 aa13.46□□□□□ -0.25
TPM1-209ENST00000558072 IFNKQ9P0W0 207 aa13.46□□□□□ -0.25
TPM1-209ENST00000558072 GIT1Q9Y2X7 761 aa13.46□□□□□ -0.25
TPM1-209ENST00000558072 TET1Q8NFU7 2136 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms