RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 FUT10Q6P4F1 479 aa15.02■□□□□ -0
SNRPA1-204ENST00000558020 PDXDC1Q6P996 788 aa15.02■□□□□ -0
SNRPA1-204ENST00000558020 PALB2Q86YC2 1186 aa15.02■□□□□ -0
SNRPA1-204ENST00000558020 GSTCDQ8NEC7 633 aa15.02■□□□□ -0
SNRPA1-204ENST00000558020 PRSS33Q8NF86 280 aa15.02■□□□□ -0
SNRPA1-204ENST00000558020 RIN2Q8WYP3 895 aaPredicted RBP15.02■□□□□ -0
SNRPA1-204ENST00000558020 IGSF9Q9P2J2 1179 aa15.02■□□□□ -0
SNRPA1-204ENST00000558020 TDRD15B5MCY1 1934 aaKnown RBP15.02□□□□□ -0.01
SNRPA1-204ENST00000558020 K7ERI5 159 aa15.01□□□□□ -0.01
SNRPA1-204ENST00000558020 LAD1O00515 517 aa15.01□□□□□ -0.01
SNRPA1-204ENST00000558020 PRKCBP05771 671 aa15.01□□□□□ -0.01
SNRPA1-204ENST00000558020 LIG1P18858 919 aa15.01□□□□□ -0.01
SNRPA1-204ENST00000558020 ST3GAL1Q11201 340 aa15.01□□□□□ -0.01
SNRPA1-204ENST00000558020 ELAVL2Q12926 359 aaKnown RBP15.01□□□□□ -0.01
SNRPA1-204ENST00000558020 SMG7Q92540 1137 aaKnown RBP15.01□□□□□ -0.01
SNRPA1-204ENST00000558020 NXPE3Q969Y0 559 aa15.01□□□□□ -0.01
SNRPA1-204ENST00000558020 GPR62Q9BZJ7 368 aa15.01□□□□□ -0.01
SNRPA1-204ENST00000558020 BHMT2Q9H2M3 363 aa15.01□□□□□ -0.01
SNRPA1-204ENST00000558020 PDZD7Q9H5P4 517 aa15.01□□□□□ -0.01
SNRPA1-204ENST00000558020 WDR6Q9NNW5 1121 aaKnown RBP15.01□□□□□ -0.01
SNRPA1-204ENST00000558020 ZDHHC7Q9NXF8 308 aa15.01□□□□□ -0.01
SNRPA1-204ENST00000558020 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.01□□□□□ -0.01
SNRPA1-204ENST00000558020 KIAA1024Q9UPX6 916 aa15.01□□□□□ -0.01
SNRPA1-204ENST00000558020 DNM3Q9UQ16 869 aa15.01□□□□□ -0.01
SNRPA1-204ENST00000558020 PHLPP2Q6ZVD8 1323 aa15□□□□□ -0.01
SNRPA1-204ENST00000558020 U2AF2P26368 475 aaKnown RBP eCLIP15□□□□□ -0.01
SNRPA1-204ENST00000558020 GBP2P32456 591 aaPredicted RBP15□□□□□ -0.01
SNRPA1-204ENST00000558020 CLCN5P51795 746 aa15□□□□□ -0.01
SNRPA1-204ENST00000558020 VCPP55072 806 aaKnown RBP15□□□□□ -0.01
SNRPA1-204ENST00000558020 DCAF4L1Q3SXM0 396 aa15□□□□□ -0.01
SNRPA1-204ENST00000558020 KRT79Q5XKE5 535 aa15□□□□□ -0.01
SNRPA1-204ENST00000558020 ASTLQ6HA08 431 aaPredicted RBP15□□□□□ -0.01
SNRPA1-204ENST00000558020 ATOH1Q92858 354 aaPredicted RBP15□□□□□ -0.01
SNRPA1-204ENST00000558020 TTPALQ9BTX7 342 aa15□□□□□ -0.01
SNRPA1-204ENST00000558020 KCNK12Q9HB15 430 aa15□□□□□ -0.01
SNRPA1-204ENST00000558020 SNTG2Q9NY99 539 aa15□□□□□ -0.01
SNRPA1-204ENST00000558020 KCNG1Q9UIX4 513 aa15□□□□□ -0.01
SNRPA1-204ENST00000558020 TGM5O43548 720 aa14.99□□□□□ -0.01
SNRPA1-204ENST00000558020 CENPBP07199 599 aaPredicted RBP14.99□□□□□ -0.01
SNRPA1-204ENST00000558020 SPATA31D3P0C874 917 aa14.99□□□□□ -0.01
SNRPA1-204ENST00000558020 TCF15Q12870 199 aa14.99□□□□□ -0.01
SNRPA1-204ENST00000558020 PTGDRQ13258 359 aa14.99□□□□□ -0.01
SNRPA1-204ENST00000558020 FAM171A1Q5VUB5 890 aa14.99□□□□□ -0.01
SNRPA1-204ENST00000558020 DTHD1Q6ZMT9 781 aa14.99□□□□□ -0.01
SNRPA1-204ENST00000558020 SPATA31D4Q6ZUB0 917 aa14.99□□□□□ -0.01
SNRPA1-204ENST00000558020 CEP57Q86XR8 500 aa14.99□□□□□ -0.01
SNRPA1-204ENST00000558020 C4orf32Q8N8J7 132 aa14.99□□□□□ -0.01
SNRPA1-204ENST00000558020 B3GALT6Q96L58 329 aa14.99□□□□□ -0.01
SNRPA1-204ENST00000558020 NT5C3AQ9H0P0 336 aa14.99□□□□□ -0.01
SNRPA1-204ENST00000558020 DDX19AQ9NUU7 478 aaKnown RBP14.99□□□□□ -0.01
SNRPA1-204ENST00000558020 FBXL21Q9UKT6 434 aa14.99□□□□□ -0.01
SNRPA1-204ENST00000558020 RBM19Q9Y4C8 960 aaKnown RBP14.99□□□□□ -0.01
SNRPA1-204ENST00000558020 CASTOR2A6NHX0 329 aa14.98□□□□□ -0.01
SNRPA1-204ENST00000558020 CCDC169A6NNP5 214 aa14.98□□□□□ -0.01
SNRPA1-204ENST00000558020 F8W810 466 aa14.98□□□□□ -0.01
SNRPA1-204ENST00000558020 GALR2O43603 387 aaPredicted RBP14.98□□□□□ -0.01
SNRPA1-204ENST00000558020 TRAPPC3O43617 180 aa14.98□□□□□ -0.01
SNRPA1-204ENST00000558020 RECQL4O94761 1208 aa14.98□□□□□ -0.01
SNRPA1-204ENST00000558020 PDGFBP01127 241 aaPredicted RBP14.98□□□□□ -0.01
SNRPA1-204ENST00000558020 ATF7IP2Q5U623 682 aa14.98□□□□□ -0.01
SNRPA1-204ENST00000558020 LILRA6Q6PI73 481 aa14.98□□□□□ -0.01
SNRPA1-204ENST00000558020 IGSF22Q8N9C0 903 aa14.98□□□□□ -0.01
SNRPA1-204ENST00000558020 SNX29Q8TEQ0 813 aa14.98□□□□□ -0.01
SNRPA1-204ENST00000558020 BSNDQ8WZ55 320 aa14.98□□□□□ -0.01
SNRPA1-204ENST00000558020 RABGGTAQ92696 567 aa14.98□□□□□ -0.01
SNRPA1-204ENST00000558020 DRC1Q96MC2 740 aa14.98□□□□□ -0.01
SNRPA1-204ENST00000558020 PRKD2Q9BZL6 878 aa14.98□□□□□ -0.01
SNRPA1-204ENST00000558020 CCDC113Q9H0I3 377 aa14.98□□□□□ -0.01
SNRPA1-204ENST00000558020 TOPORSQ9NS56 1045 aaPredicted RBP14.98□□□□□ -0.01
SNRPA1-204ENST00000558020 GDAQ9Y2T3 454 aa14.98□□□□□ -0.01
SNRPA1-204ENST00000558020 ZFP37Q9Y6Q3 630 aaPredicted RBP14.98□□□□□ -0.01
SNRPA1-204ENST00000558020 CLUHO75153 1309 aa14.97□□□□□ -0.01
SNRPA1-204ENST00000558020 ST18O60284 1047 aa14.97□□□□□ -0.01
SNRPA1-204ENST00000558020 RFPL2O75678 378 aa14.97□□□□□ -0.01
SNRPA1-204ENST00000558020 PAPLNO95428 1278 aa14.97□□□□□ -0.01
SNRPA1-204ENST00000558020 MYBP10242 640 aa14.97□□□□□ -0.01
SNRPA1-204ENST00000558020 PRPHP41219 470 aa14.97□□□□□ -0.01
SNRPA1-204ENST00000558020 YARSP54577 528 aaKnown RBP14.97□□□□□ -0.01
SNRPA1-204ENST00000558020 DMP1Q13316 513 aaPredicted RBP14.97□□□□□ -0.01
SNRPA1-204ENST00000558020 LIN9Q5TKA1 542 aa14.97□□□□□ -0.01
SNRPA1-204ENST00000558020 DCLRE1AQ6PJP8 1040 aa14.97□□□□□ -0.01
SNRPA1-204ENST00000558020 GLYCTKQ8IVS8 523 aa14.97□□□□□ -0.01
SNRPA1-204ENST00000558020 KCTD17Q8N5Z5 321 aa14.97□□□□□ -0.01
SNRPA1-204ENST00000558020 PIK3R5Q8WYR1 880 aa14.97□□□□□ -0.01
SNRPA1-204ENST00000558020 UROC1Q96N76 676 aa14.97□□□□□ -0.01
SNRPA1-204ENST00000558020 C17orf75Q9HAS0 396 aa14.97□□□□□ -0.01
SNRPA1-204ENST00000558020 EPS15L1Q9UBC2 864 aa14.97□□□□□ -0.01
SNRPA1-204ENST00000558020 DUSP12Q9UNI6 340 aa14.97□□□□□ -0.01
SNRPA1-204ENST00000558020 TTLL13PA6NNM8 815 aa14.96□□□□□ -0.01
SNRPA1-204ENST00000558020 STK25O00506 426 aa14.96□□□□□ -0.01
SNRPA1-204ENST00000558020 PTGESO14684 152 aa14.96□□□□□ -0.01
SNRPA1-204ENST00000558020 ZMYND10O75800 440 aa14.96□□□□□ -0.01
SNRPA1-204ENST00000558020 B3GAT3O94766 335 aa14.96□□□□□ -0.01
SNRPA1-204ENST00000558020 HNRNPA1P09651 372 aaKnown RBP eCLIP14.96□□□□□ -0.01
SNRPA1-204ENST00000558020 RPL17P18621 184 aaKnown RBP14.96□□□□□ -0.01
SNRPA1-204ENST00000558020 PEX3P56589 373 aa14.96□□□□□ -0.01
SNRPA1-204ENST00000558020 RABEP1Q15276 862 aa14.96□□□□□ -0.01
SNRPA1-204ENST00000558020 PSMD5Q16401 504 aa14.96□□□□□ -0.01
SNRPA1-204ENST00000558020 RILPL1Q5EBL4 403 aa14.96□□□□□ -0.01
SNRPA1-204ENST00000558020 MCTP1Q6DN14 999 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms