RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 PRSS33Q8NF86 280 aa16.14■□□□□ 0.17
SHMT2-235ENST00000557740 FEZF2Q8TBJ5 459 aa16.14■□□□□ 0.17
SHMT2-235ENST00000557740 RIN2Q8WYP3 895 aaPredicted RBP16.14■□□□□ 0.17
SHMT2-235ENST00000557740 RABGGTAQ92696 567 aa16.14■□□□□ 0.17
SHMT2-235ENST00000557740 B3GALT6Q96L58 329 aa16.14■□□□□ 0.17
SHMT2-235ENST00000557740 KIFC3Q9BVG8 833 aa16.14■□□□□ 0.17
SHMT2-235ENST00000557740 GPR62Q9BZJ7 368 aa16.14■□□□□ 0.17
SHMT2-235ENST00000557740 DDX19AQ9NUU7 478 aaKnown RBP16.14■□□□□ 0.17
SHMT2-235ENST00000557740 SNTG2Q9NY99 539 aa16.14■□□□□ 0.17
SHMT2-235ENST00000557740 CASTOR2A6NHX0 329 aa16.13■□□□□ 0.17
SHMT2-235ENST00000557740 LAD1O00515 517 aa16.13■□□□□ 0.17
SHMT2-235ENST00000557740 VCPP55072 806 aaKnown RBP16.13■□□□□ 0.17
SHMT2-235ENST00000557740 PDIA5Q14554 519 aa16.13■□□□□ 0.17
SHMT2-235ENST00000557740 ECM1Q16610 540 aa16.13■□□□□ 0.17
SHMT2-235ENST00000557740 IER5LQ5T953 404 aa16.13■□□□□ 0.17
SHMT2-235ENST00000557740 KRT79Q5XKE5 535 aa16.13■□□□□ 0.17
SHMT2-235ENST00000557740 MCTP1Q6DN14 999 aa16.13■□□□□ 0.17
SHMT2-235ENST00000557740 GLYCTKQ8IVS8 523 aa16.13■□□□□ 0.17
SHMT2-235ENST00000557740 GPR65Q8IYL9 337 aa16.13■□□□□ 0.17
SHMT2-235ENST00000557740 IGSF22Q8N9C0 903 aa16.13■□□□□ 0.17
SHMT2-235ENST00000557740 STAMQ92783 540 aa16.13■□□□□ 0.17
SHMT2-235ENST00000557740 CHST7Q9NS84 486 aa16.13■□□□□ 0.17
SHMT2-235ENST00000557740 USP20Q9Y2K6 914 aa16.13■□□□□ 0.17
SHMT2-235ENST00000557740 PCDHB6Q9Y5E3 794 aa16.13■□□□□ 0.17
SHMT2-235ENST00000557740 CCDC195A0A1B0GUA6 201 aa16.12■□□□□ 0.17
SHMT2-235ENST00000557740 PDGFBP01127 241 aaPredicted RBP16.12■□□□□ 0.17
SHMT2-235ENST00000557740 THP07101 528 aa16.12■□□□□ 0.17
SHMT2-235ENST00000557740 MYBP10242 640 aa16.12■□□□□ 0.17
SHMT2-235ENST00000557740 MRE11P49959 708 aa16.12■□□□□ 0.17
SHMT2-235ENST00000557740 TOB1P50616 345 aaPredicted RBP16.12■□□□□ 0.17
SHMT2-235ENST00000557740 EEF1DP3Q658K8 133 aa16.12■□□□□ 0.17
SHMT2-235ENST00000557740 CYP26C1Q6V0L0 522 aa16.12■□□□□ 0.17
SHMT2-235ENST00000557740 PALB2Q86YC2 1186 aa16.12■□□□□ 0.17
SHMT2-235ENST00000557740 HASPINQ8TF76 798 aa16.12■□□□□ 0.17
SHMT2-235ENST00000557740 HDAC7Q8WUI4 952 aa16.12■□□□□ 0.17
SHMT2-235ENST00000557740 SMG7Q92540 1137 aaKnown RBP16.12■□□□□ 0.17
SHMT2-235ENST00000557740 SMOC2Q9H3U7 446 aa16.12■□□□□ 0.17
SHMT2-235ENST00000557740 PLEKHA4Q9H4M7 779 aa16.12■□□□□ 0.17
SHMT2-235ENST00000557740 POLD4Q9HCU8 107 aa16.12■□□□□ 0.17
SHMT2-235ENST00000557740 FNIP2Q9P278 1114 aa16.12■□□□□ 0.17
SHMT2-235ENST00000557740 CACNG4Q9UBN1 327 aa16.12■□□□□ 0.17
SHMT2-235ENST00000557740 DNM3Q9UQ16 869 aa16.12■□□□□ 0.17
SHMT2-235ENST00000557740 GDAQ9Y2T3 454 aa16.12■□□□□ 0.17
SHMT2-235ENST00000557740 CLUHO75153 1309 aa16.12■□□□□ 0.17
SHMT2-235ENST00000557740 PTGESO14684 152 aa16.11■□□□□ 0.17
SHMT2-235ENST00000557740 RFPL2O75678 378 aa16.11■□□□□ 0.17
SHMT2-235ENST00000557740 KIF4AO95239 1232 aa16.11■□□□□ 0.17
SHMT2-235ENST00000557740 EDN1P05305 212 aa16.11■□□□□ 0.17
SHMT2-235ENST00000557740 SPATA31D3P0C874 917 aa16.11■□□□□ 0.17
SHMT2-235ENST00000557740 AVPR2P30518 371 aa16.11■□□□□ 0.17
SHMT2-235ENST00000557740 GBP2P32456 591 aaPredicted RBP16.11■□□□□ 0.17
SHMT2-235ENST00000557740 PRPHP41219 470 aa16.11■□□□□ 0.17
SHMT2-235ENST00000557740 DMP1Q13316 513 aaPredicted RBP16.11■□□□□ 0.17
SHMT2-235ENST00000557740 ATF7IP2Q5U623 682 aa16.11■□□□□ 0.17
SHMT2-235ENST00000557740 SPATA31D4Q6ZUB0 917 aa16.11■□□□□ 0.17
SHMT2-235ENST00000557740 PAAF1Q9BRP4 392 aa16.11■□□□□ 0.17
SHMT2-235ENST00000557740 TTPALQ9BTX7 342 aa16.11■□□□□ 0.17
SHMT2-235ENST00000557740 MFSD1Q9H3U5 465 aa16.11■□□□□ 0.17
SHMT2-235ENST00000557740 UPF2Q9HAU5 1272 aaKnown RBP16.11■□□□□ 0.17
SHMT2-235ENST00000557740 PIDD1Q9HB75 910 aa16.11■□□□□ 0.17
SHMT2-235ENST00000557740 DAXXQ9UER7 740 aaPredicted RBP16.11■□□□□ 0.17
SHMT2-235ENST00000557740 PHLPP2Q6ZVD8 1323 aa16.11■□□□□ 0.17
SHMT2-235ENST00000557740 TDRD15B5MCY1 1934 aaKnown RBP16.1■□□□□ 0.17
SHMT2-235ENST00000557740 CCDC169A6NNP5 214 aa16.1■□□□□ 0.17
SHMT2-235ENST00000557740 PP2D1A8MPX8 630 aa16.1■□□□□ 0.17
SHMT2-235ENST00000557740 E9PMD0 336 aa16.1■□□□□ 0.17
SHMT2-235ENST00000557740 K7ERI5 159 aa16.1■□□□□ 0.17
SHMT2-235ENST00000557740 TGM5O43548 720 aa16.1■□□□□ 0.17
SHMT2-235ENST00000557740 C1RP00736 705 aa16.1■□□□□ 0.17
SHMT2-235ENST00000557740 RPL17P18621 184 aaKnown RBP16.1■□□□□ 0.17
SHMT2-235ENST00000557740 ELAVL2Q12926 359 aaKnown RBP16.1■□□□□ 0.17
SHMT2-235ENST00000557740 RTP2Q5QGT7 225 aa16.1■□□□□ 0.17
SHMT2-235ENST00000557740 FAM171A1Q5VUB5 890 aa16.1■□□□□ 0.17
SHMT2-235ENST00000557740 PRSS55Q6UWB4 352 aaPredicted RBP16.1■□□□□ 0.17
SHMT2-235ENST00000557740 DTHD1Q6ZMT9 781 aa16.1■□□□□ 0.17
SHMT2-235ENST00000557740 CEP57Q86XR8 500 aa16.1■□□□□ 0.17
SHMT2-235ENST00000557740 DRC1Q96MC2 740 aa16.1■□□□□ 0.17
SHMT2-235ENST00000557740 RHOBTB2Q9BYZ6 727 aa16.1■□□□□ 0.17
SHMT2-235ENST00000557740 WDR6Q9NNW5 1121 aaKnown RBP16.1■□□□□ 0.17
SHMT2-235ENST00000557740 ZDHHC7Q9NXF8 308 aa16.1■□□□□ 0.17
SHMT2-235ENST00000557740 CACNA1HO95180 2353 aa16.1■□□□□ 0.17
SHMT2-235ENST00000557740 H3BQV1 296 aa16.09■□□□□ 0.17
SHMT2-235ENST00000557740 HIP1RO75146 1068 aa16.09■□□□□ 0.17
SHMT2-235ENST00000557740 YARSP54577 528 aaKnown RBP16.09■□□□□ 0.17
SHMT2-235ENST00000557740 PEX3P56589 373 aa16.09■□□□□ 0.17
SHMT2-235ENST00000557740 TDGQ13569 410 aa16.09■□□□□ 0.17
SHMT2-235ENST00000557740 ZRSR1Q15695 479 aaKnown RBP16.09■□□□□ 0.17
SHMT2-235ENST00000557740 PSMD5Q16401 504 aa16.09■□□□□ 0.17
SHMT2-235ENST00000557740 RILPL1Q5EBL4 403 aa16.09■□□□□ 0.17
SHMT2-235ENST00000557740 GLRA4Q5JXX5 417 aa16.09■□□□□ 0.17
SHMT2-235ENST00000557740 NT5DC1Q5TFE4 455 aa16.09■□□□□ 0.17
SHMT2-235ENST00000557740 PDXDC1Q6P996 788 aa16.09■□□□□ 0.17
SHMT2-235ENST00000557740 PIK3R5Q8WYR1 880 aa16.09■□□□□ 0.17
SHMT2-235ENST00000557740 ZNF707Q96C28 371 aaPredicted RBP16.09■□□□□ 0.17
SHMT2-235ENST00000557740 RUSC1Q9BVN2 902 aa16.09■□□□□ 0.17
SHMT2-235ENST00000557740 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.09■□□□□ 0.17
SHMT2-235ENST00000557740 TNFSF13BQ9Y275 285 aa16.09■□□□□ 0.17
SHMT2-235ENST00000557740 DENND4AQ7Z401 1863 aa16.09■□□□□ 0.17
SHMT2-235ENST00000557740 CDC25AP30304 524 aa16.08■□□□□ 0.16
SHMT2-235ENST00000557740 NPTX2P47972 431 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms