RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 CALUO43852 315 aaPredicted RBP16.66■□□□□ 0.26
NEDD1-213ENST00000557644 EOMESO95936 686 aa16.66■□□□□ 0.26
NEDD1-213ENST00000557644 PAK1Q13153 545 aa16.66■□□□□ 0.26
NEDD1-213ENST00000557644 APBB1IPQ7Z5R6 666 aaPredicted RBP16.66■□□□□ 0.26
NEDD1-213ENST00000557644 RDH13Q8NBN7 331 aa16.66■□□□□ 0.26
NEDD1-213ENST00000557644 GOLGA5Q8TBA6 731 aa16.66■□□□□ 0.26
NEDD1-213ENST00000557644 ZFP42Q96MM3 310 aa16.66■□□□□ 0.26
NEDD1-213ENST00000557644 FUCA2Q9BTY2 467 aa16.66■□□□□ 0.26
NEDD1-213ENST00000557644 PTPRSQ13332 1948 aa16.66■□□□□ 0.26
NEDD1-213ENST00000557644 LETM1O95202 739 aaPredicted RBP16.66■□□□□ 0.26
NEDD1-213ENST00000557644 CXCL8P10145 99 aa16.66■□□□□ 0.26
NEDD1-213ENST00000557644 SNRPFP62306 86 aaKnown RBP16.66■□□□□ 0.26
NEDD1-213ENST00000557644 STX1AQ16623 288 aa16.66■□□□□ 0.26
NEDD1-213ENST00000557644 TTI2Q6NXR4 508 aa16.66■□□□□ 0.26
NEDD1-213ENST00000557644 TDHQ8IZJ6 230 aa16.66■□□□□ 0.26
NEDD1-213ENST00000557644 HELQQ8TDG4 1101 aa16.66■□□□□ 0.26
NEDD1-213ENST00000557644 DNAJC25Q9H1X3 360 aa16.66■□□□□ 0.26
NEDD1-213ENST00000557644 DMAC2Q9NW81 257 aa16.66■□□□□ 0.26
NEDD1-213ENST00000557644 CPSF3Q9UKF6 684 aaKnown RBP16.66■□□□□ 0.26
NEDD1-213ENST00000557644 CDH23Q9H251 3354 aa16.66■□□□□ 0.26
NEDD1-213ENST00000557644 GJB5O95377 273 aa16.65■□□□□ 0.26
NEDD1-213ENST00000557644 NR2F2P24468 414 aa16.65■□□□□ 0.26
NEDD1-213ENST00000557644 MLH1P40692 756 aa16.65■□□□□ 0.26
NEDD1-213ENST00000557644 PPP1R2P41236 205 aa16.65■□□□□ 0.26
NEDD1-213ENST00000557644 CASP4P49662 377 aa16.65■□□□□ 0.26
NEDD1-213ENST00000557644 CBWD2Q8IUF1 395 aa16.65■□□□□ 0.26
NEDD1-213ENST00000557644 HERC6Q8IVU3 1022 aa16.65■□□□□ 0.26
NEDD1-213ENST00000557644 C12orf56Q8IXR9 622 aa16.65■□□□□ 0.26
NEDD1-213ENST00000557644 PGBD4Q96DM1 585 aa16.65■□□□□ 0.26
NEDD1-213ENST00000557644 ACAP3Q96P50 834 aa16.65■□□□□ 0.26
NEDD1-213ENST00000557644 SLC9A7Q96T83 725 aa16.65■□□□□ 0.26
NEDD1-213ENST00000557644 GAD1Q99259 594 aa16.65■□□□□ 0.26
NEDD1-213ENST00000557644 DUSP9Q99956 384 aaKnown RBP16.65■□□□□ 0.26
NEDD1-213ENST00000557644 CCDC94Q9BW85 323 aaPredicted RBP16.65■□□□□ 0.26
NEDD1-213ENST00000557644 RSAD1Q9HA92 442 aa16.65■□□□□ 0.26
NEDD1-213ENST00000557644 ANO10Q9NW15 660 aa16.65■□□□□ 0.26
NEDD1-213ENST00000557644 CGNQ9P2M7 1197 aaKnown RBP16.65■□□□□ 0.26
NEDD1-213ENST00000557644 INPP5FQ9Y2H2 1132 aa16.65■□□□□ 0.26
NEDD1-213ENST00000557644 TULP1O00294 542 aaPredicted RBP16.65■□□□□ 0.26
NEDD1-213ENST00000557644 DGKIO75912 1065 aa16.65■□□□□ 0.26
NEDD1-213ENST00000557644 RABGGTBP53611 331 aa16.65■□□□□ 0.26
NEDD1-213ENST00000557644 ENOX2Q16206 610 aaKnown RBP16.65■□□□□ 0.26
NEDD1-213ENST00000557644 SLC10A6Q3KNW5 377 aa16.65■□□□□ 0.26
NEDD1-213ENST00000557644 GPD1LQ8N335 351 aa16.65■□□□□ 0.26
NEDD1-213ENST00000557644 ARL5CA6NH57 179 aa16.64■□□□□ 0.25
NEDD1-213ENST00000557644 EXTL3O43909 919 aa16.64■□□□□ 0.25
NEDD1-213ENST00000557644 EXOC3O60645 756 aa16.64■□□□□ 0.25
NEDD1-213ENST00000557644 OFD1O75665 1012 aa16.64■□□□□ 0.25
NEDD1-213ENST00000557644 CLTAP09496 248 aa16.64■□□□□ 0.25
NEDD1-213ENST00000557644 WNT7BP56706 349 aa16.64■□□□□ 0.25
NEDD1-213ENST00000557644 LRRC63Q05C16 580 aa16.64■□□□□ 0.25
NEDD1-213ENST00000557644 ADAM9Q13443 819 aa16.64■□□□□ 0.25
NEDD1-213ENST00000557644 EDRF1Q3B7T1 1238 aa16.64■□□□□ 0.25
NEDD1-213ENST00000557644 PAN2Q504Q3 1202 aaKnown RBP16.64■□□□□ 0.25
NEDD1-213ENST00000557644 SLC9A9Q8IVB4 645 aa16.64■□□□□ 0.25
NEDD1-213ENST00000557644 HACE1Q8IYU2 909 aa16.64■□□□□ 0.25
NEDD1-213ENST00000557644 XXYLT1Q8NBI6 393 aa16.64■□□□□ 0.25
NEDD1-213ENST00000557644 TSG101Q99816 390 aa16.64■□□□□ 0.25
NEDD1-213ENST00000557644 MIOSQ9NXC5 875 aa16.64■□□□□ 0.25
NEDD1-213ENST00000557644 COLQQ9Y215 455 aaPredicted RBP16.64■□□□□ 0.25
NEDD1-213ENST00000557644 CCDC192P0DO97 292 aa16.64■□□□□ 0.25
NEDD1-213ENST00000557644 ANO6Q4KMQ2 910 aa16.64■□□□□ 0.25
NEDD1-213ENST00000557644 CEP135Q66GS9 1140 aa16.64■□□□□ 0.25
NEDD1-213ENST00000557644 GSTCDQ8NEC7 633 aa16.64■□□□□ 0.25
NEDD1-213ENST00000557644 PHOSPHO2Q8TCD6 241 aa16.64■□□□□ 0.25
NEDD1-213ENST00000557644 FAM212AQ96EL1 285 aa16.64■□□□□ 0.25
NEDD1-213ENST00000557644 FBXL18Q96ME1 805 aa16.64■□□□□ 0.25
NEDD1-213ENST00000557644 CASD1Q96PB1 797 aa16.64■□□□□ 0.25
NEDD1-213ENST00000557644 ZBED2Q9BTP6 218 aa16.64■□□□□ 0.25
NEDD1-213ENST00000557644 HCSTQ9UBK5 93 aa16.64■□□□□ 0.25
NEDD1-213ENST00000557644 RWDD2AQ9UIY3 292 aa16.64■□□□□ 0.25
NEDD1-213ENST00000557644 PLAGL2Q9UPG8 496 aa16.64■□□□□ 0.25
NEDD1-213ENST00000557644 GIT1Q9Y2X7 761 aa16.64■□□□□ 0.25
NEDD1-213ENST00000557644 AKAP3O75969 853 aa16.63■□□□□ 0.25
NEDD1-213ENST00000557644 ADRB2P07550 413 aa16.63■□□□□ 0.25
NEDD1-213ENST00000557644 SPAG1Q07617 926 aa16.63■□□□□ 0.25
NEDD1-213ENST00000557644 SNRNP35Q16560 246 aaKnown RBP16.63■□□□□ 0.25
NEDD1-213ENST00000557644 NFIL3Q16649 462 aa16.63■□□□□ 0.25
NEDD1-213ENST00000557644 GLRA4Q5JXX5 417 aa16.63■□□□□ 0.25
NEDD1-213ENST00000557644 LRRC55Q6ZSA7 311 aa16.63■□□□□ 0.25
NEDD1-213ENST00000557644 SNX27Q96L92 541 aa16.63■□□□□ 0.25
NEDD1-213ENST00000557644 YME1L1Q96TA2 773 aa16.63■□□□□ 0.25
NEDD1-213ENST00000557644 RPF1Q9H9Y2 349 aaKnown RBP16.63■□□□□ 0.25
NEDD1-213ENST00000557644 RC3H2Q9HBD1 1191 aaKnown RBP16.63■□□□□ 0.25
NEDD1-213ENST00000557644 DACH1Q9UI36 760 aa16.63■□□□□ 0.25
NEDD1-213ENST00000557644 CHD9Q3L8U1 2897 aa16.63■□□□□ 0.25
NEDD1-213ENST00000557644 CHD7Q9P2D1 2997 aa16.63■□□□□ 0.25
NEDD1-213ENST00000557644 BICDL2A1A5D9 508 aa16.63■□□□□ 0.25
NEDD1-213ENST00000557644 TBKBP1A7MCY6 615 aa16.63■□□□□ 0.25
NEDD1-213ENST00000557644 LDHAP00338 332 aaKnown RBP16.63■□□□□ 0.25
NEDD1-213ENST00000557644 POMCP01189 267 aa16.63■□□□□ 0.25
NEDD1-213ENST00000557644 MYOGP15173 224 aa16.63■□□□□ 0.25
NEDD1-213ENST00000557644 SCNN1GP51170 649 aa16.63■□□□□ 0.25
NEDD1-213ENST00000557644 YARSP54577 528 aaKnown RBP16.63■□□□□ 0.25
NEDD1-213ENST00000557644 GLB1LQ6UWU2 654 aa16.63■□□□□ 0.25
NEDD1-213ENST00000557644 ALKAL1Q6UXT8 129 aa16.63■□□□□ 0.25
NEDD1-213ENST00000557644 ABI1Q8IZP0 508 aa16.63■□□□□ 0.25
NEDD1-213ENST00000557644 TMEM174Q8WUU8 243 aa16.63■□□□□ 0.25
NEDD1-213ENST00000557644 ZNF689Q96CS4 500 aaPredicted RBP16.63■□□□□ 0.25
NEDD1-213ENST00000557644 ZMAT2Q96NC0 199 aaKnown RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms