RNA–Protein interactions for RNA: ENST00000557641.5

GABRB3-212, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 828 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-212ENST00000557641 GOLGA8JA6NMD2 632 aa11.13□□□□□ -0.63
GABRB3-212ENST00000557641 ABLIM1O14639 778 aa11.13□□□□□ -0.63
GABRB3-212ENST00000557641 HSPA8P11142 646 aaKnown RBP11.13□□□□□ -0.63
GABRB3-212ENST00000557641 TRIM21P19474 475 aaKnown RBP11.13□□□□□ -0.63
GABRB3-212ENST00000557641 FMO5P49326 533 aa11.13□□□□□ -0.63
GABRB3-212ENST00000557641 CTCFP49711 727 aaPredicted RBP11.13□□□□□ -0.63
GABRB3-212ENST00000557641 CLDN10P78369 228 aa11.13□□□□□ -0.63
GABRB3-212ENST00000557641 MRPS6P82932 125 aaKnown RBP11.13□□□□□ -0.63
GABRB3-212ENST00000557641 ZNF200P98182 395 aaPredicted RBP11.13□□□□□ -0.63
GABRB3-212ENST00000557641 PTGISQ16647 500 aa11.13□□□□□ -0.63
GABRB3-212ENST00000557641 EXOC3L4Q17RC7 722 aa11.13□□□□□ -0.63
GABRB3-212ENST00000557641 TSR1Q2NL82 804 aaKnown RBP11.13□□□□□ -0.63
GABRB3-212ENST00000557641 DCAF4L1Q3SXM0 396 aa11.13□□□□□ -0.63
GABRB3-212ENST00000557641 ZNF568Q3ZCX4 644 aa11.13□□□□□ -0.63
GABRB3-212ENST00000557641 CATSPER4Q7RTX7 472 aa11.13□□□□□ -0.63
GABRB3-212ENST00000557641 CBWD2Q8IUF1 395 aa11.13□□□□□ -0.63
GABRB3-212ENST00000557641 LRRC8AQ8IWT6 810 aa11.13□□□□□ -0.63
GABRB3-212ENST00000557641 NEK11Q8NG66 645 aa11.13□□□□□ -0.63
GABRB3-212ENST00000557641 PANX2Q96RD6 677 aa11.13□□□□□ -0.63
GABRB3-212ENST00000557641 NAA15Q9BXJ9 866 aaKnown RBP11.13□□□□□ -0.63
GABRB3-212ENST00000557641 NUCKS1Q9H1E3 243 aaKnown RBP11.13□□□□□ -0.63
GABRB3-212ENST00000557641 MMRN2Q9H8L6 949 aa11.13□□□□□ -0.63
GABRB3-212ENST00000557641 STARD7Q9NQZ5 370 aa11.13□□□□□ -0.63
GABRB3-212ENST00000557641 ANKFY1Q9P2R3 1169 aa11.13□□□□□ -0.63
GABRB3-212ENST00000557641 FBXL5Q9UKA1 691 aa11.13□□□□□ -0.63
GABRB3-212ENST00000557641 OGDHLQ9ULD0 1010 aa11.13□□□□□ -0.63
GABRB3-212ENST00000557641 CAPN11Q9UMQ6 739 aa11.13□□□□□ -0.63
GABRB3-212ENST00000557641 NOD1Q9Y239 953 aa11.13□□□□□ -0.63
GABRB3-212ENST00000557641 LUC7L2Q9Y383 392 aaKnown RBP11.13□□□□□ -0.63
GABRB3-212ENST00000557641 TRPV2Q9Y5S1 764 aa11.13□□□□□ -0.63
GABRB3-212ENST00000557641 GRIN2DO15399 1336 aa11.12□□□□□ -0.63
GABRB3-212ENST00000557641 A0A1W2PQ45 241 aaPredicted RBP11.12□□□□□ -0.63
GABRB3-212ENST00000557641 A0A1W2PQY0 241 aa11.12□□□□□ -0.63
GABRB3-212ENST00000557641 TSPAN1O60635 241 aa11.12□□□□□ -0.63
GABRB3-212ENST00000557641 MFAP3LO75121 409 aa11.12□□□□□ -0.63
GABRB3-212ENST00000557641 IL18RAPO95256 599 aa11.12□□□□□ -0.63
GABRB3-212ENST00000557641 GYPCP04921 128 aa11.12□□□□□ -0.63
GABRB3-212ENST00000557641 EDN1P05305 212 aa11.12□□□□□ -0.63
GABRB3-212ENST00000557641 CCL5P13501 91 aa11.12□□□□□ -0.63
GABRB3-212ENST00000557641 ARF4P18085 180 aaPredicted RBP11.12□□□□□ -0.63
GABRB3-212ENST00000557641 RFX1P22670 979 aa11.12□□□□□ -0.63
GABRB3-212ENST00000557641 ZBED6P86452 979 aa11.12□□□□□ -0.63
GABRB3-212ENST00000557641 RBL2Q08999 1139 aa11.12□□□□□ -0.63
GABRB3-212ENST00000557641 ARID5BQ14865 1188 aa11.12□□□□□ -0.63
GABRB3-212ENST00000557641 SNX17Q15036 470 aa11.12□□□□□ -0.63
GABRB3-212ENST00000557641 KRT39Q6A163 491 aa11.12□□□□□ -0.63
GABRB3-212ENST00000557641 SMYD5Q6GMV2 418 aa11.12□□□□□ -0.63
GABRB3-212ENST00000557641 NOTUMQ6P988 496 aa11.12□□□□□ -0.63
GABRB3-212ENST00000557641 FMNL3Q8IVF7 1028 aa11.12□□□□□ -0.63
GABRB3-212ENST00000557641 BRSK2Q8IWQ3 736 aa11.12□□□□□ -0.63
GABRB3-212ENST00000557641 ZNF668Q96K58 619 aaPredicted RBP11.12□□□□□ -0.63
GABRB3-212ENST00000557641 ZBTB45Q96K62 511 aaPredicted RBP11.12□□□□□ -0.63
GABRB3-212ENST00000557641 FNBP1Q96RU3 617 aa11.12□□□□□ -0.63
GABRB3-212ENST00000557641 OSMRQ99650 979 aa11.12□□□□□ -0.63
GABRB3-212ENST00000557641 RNF208Q9H0X6 261 aa11.12□□□□□ -0.63
GABRB3-212ENST00000557641 TMEM8AQ9HCN3 771 aa11.12□□□□□ -0.63
GABRB3-212ENST00000557641 RBAKQ9NYW8 714 aaPredicted RBP11.12□□□□□ -0.63
GABRB3-212ENST00000557641 CPSF3Q9UKF6 684 aaKnown RBP11.12□□□□□ -0.63
GABRB3-212ENST00000557641 USP20Q9Y2K6 914 aa11.12□□□□□ -0.63
GABRB3-212ENST00000557641 SQORQ9Y6N5 450 aa11.12□□□□□ -0.63
GABRB3-212ENST00000557641 SCN10AQ9Y5Y9 1956 aa11.12□□□□□ -0.63
GABRB3-212ENST00000557641 ARVCFO00192 962 aa11.11□□□□□ -0.63
GABRB3-212ENST00000557641 B4GALT5O43286 388 aa11.11□□□□□ -0.63
GABRB3-212ENST00000557641 FAM189A1O60320 539 aa11.11□□□□□ -0.63
GABRB3-212ENST00000557641 ADRB2P07550 413 aa11.11□□□□□ -0.63
GABRB3-212ENST00000557641 CLTAP09496 248 aa11.11□□□□□ -0.63
GABRB3-212ENST00000557641 IQCF3P0C7M6 154 aa11.11□□□□□ -0.63
GABRB3-212ENST00000557641 CASP14P31944 242 aa11.11□□□□□ -0.63
GABRB3-212ENST00000557641 MXI1P50539 228 aa11.11□□□□□ -0.63
GABRB3-212ENST00000557641 MYL7Q01449 175 aa11.11□□□□□ -0.63
GABRB3-212ENST00000557641 KCNMA1Q12791 1236 aa11.11□□□□□ -0.63
GABRB3-212ENST00000557641 FAM26DQ5JW98 314 aa11.11□□□□□ -0.63
GABRB3-212ENST00000557641 VARS2Q5ST30 1063 aaKnown RBP11.11□□□□□ -0.63
GABRB3-212ENST00000557641 SLC27A1Q6PCB7 646 aa11.11□□□□□ -0.63
GABRB3-212ENST00000557641 CRELD2Q6UXH1 353 aaPredicted RBP11.11□□□□□ -0.63
GABRB3-212ENST00000557641 ZBTB33Q86T24 672 aa11.11□□□□□ -0.63
GABRB3-212ENST00000557641 CD302Q8IX05 232 aa11.11□□□□□ -0.63
GABRB3-212ENST00000557641 CCDC155Q8N6L0 562 aa11.11□□□□□ -0.63
GABRB3-212ENST00000557641 TC2NQ8N9U0 490 aa11.11□□□□□ -0.63
GABRB3-212ENST00000557641 USP38Q8NB14 1042 aa11.11□□□□□ -0.63
GABRB3-212ENST00000557641 OR8K1Q8NGG5 319 aa11.11□□□□□ -0.63
GABRB3-212ENST00000557641 CACTINQ8WUQ7 758 aaKnown RBP11.11□□□□□ -0.63
GABRB3-212ENST00000557641 ARMC5Q96C12 935 aa11.11□□□□□ -0.63
GABRB3-212ENST00000557641 FAM81BQ96LP2 452 aa11.11□□□□□ -0.63
GABRB3-212ENST00000557641 DEFB118Q96PH6 123 aa11.11□□□□□ -0.63
GABRB3-212ENST00000557641 TSPAN18Q96SJ8 248 aa11.11□□□□□ -0.63
GABRB3-212ENST00000557641 PPP1R16BQ96T49 567 aa11.11□□□□□ -0.63
GABRB3-212ENST00000557641 TTYH3Q9C0H2 523 aa11.11□□□□□ -0.63
GABRB3-212ENST00000557641 HAPLN2Q9GZV7 340 aa11.11□□□□□ -0.63
GABRB3-212ENST00000557641 CDT1Q9H211 546 aa11.11□□□□□ -0.63
GABRB3-212ENST00000557641 PDZD7Q9H5P4 517 aa11.11□□□□□ -0.63
GABRB3-212ENST00000557641 CHST12Q9NRB3 414 aa11.11□□□□□ -0.63
GABRB3-212ENST00000557641 CEP72Q9P209 647 aa11.11□□□□□ -0.63
GABRB3-212ENST00000557641 MYO6Q9UM54 1294 aa11.11□□□□□ -0.63
GABRB3-212ENST00000557641 GINS2Q9Y248 185 aa11.11□□□□□ -0.63
GABRB3-212ENST00000557641 ZKSCAN5Q9Y2L8 839 aa11.11□□□□□ -0.63
GABRB3-212ENST00000557641 COQ4Q9Y3A0 265 aa11.11□□□□□ -0.63
GABRB3-212ENST00000557641 SIP14410 1827 aa11.11□□□□□ -0.63
GABRB3-212ENST00000557641 TTC26A0AVF1 554 aa11.1□□□□□ -0.63
GABRB3-212ENST00000557641 LRRIQ3A6PVS8 624 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms