RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 MFSD5Q6N075 450 aa2.21□□□□□ -2.06
HIF1A-212ENST00000557538 TOGARAM2Q6ZUX3 1019 aa2.21□□□□□ -2.06
HIF1A-212ENST00000557538 TPH2Q8IWU9 490 aa2.21□□□□□ -2.06
HIF1A-212ENST00000557538 RTKN2Q8IZC4 609 aa2.21□□□□□ -2.06
HIF1A-212ENST00000557538 SELENOOQ9BVL4 669 aa2.21□□□□□ -2.06
HIF1A-212ENST00000557538 KCNK12Q9HB15 430 aa2.21□□□□□ -2.06
HIF1A-212ENST00000557538 MOCS1Q9NZB8 636 aa2.21□□□□□ -2.06
HIF1A-212ENST00000557538 PADI4Q9UM07 663 aa2.21□□□□□ -2.06
HIF1A-212ENST00000557538 B5MCH6 92 aa2.21□□□□□ -2.06
HIF1A-212ENST00000557538 XPOTO43592 962 aaKnown RBP2.21□□□□□ -2.06
HIF1A-212ENST00000557538 CHEK2O96017 543 aa2.21□□□□□ -2.06
HIF1A-212ENST00000557538 PLATP00750 562 aa2.21□□□□□ -2.06
HIF1A-212ENST00000557538 AMY1AP04745 511 aa2.21□□□□□ -2.06
HIF1A-212ENST00000557538 ATF3P18847 181 aa2.21□□□□□ -2.06
HIF1A-212ENST00000557538 KCNQ1P51787 676 aa2.21□□□□□ -2.06
HIF1A-212ENST00000557538 MGAT5Q09328 741 aa2.21□□□□□ -2.06
HIF1A-212ENST00000557538 TARDBPQ13148 414 aaKnown RBP eCLIP2.21□□□□□ -2.06
HIF1A-212ENST00000557538 POLD3Q15054 466 aaPredicted RBP2.21□□□□□ -2.06
HIF1A-212ENST00000557538 ACAP2Q15057 778 aa2.21□□□□□ -2.06
HIF1A-212ENST00000557538 C3orf36Q3SXR2 165 aa2.21□□□□□ -2.06
HIF1A-212ENST00000557538 MAP9Q49MG5 647 aa2.21□□□□□ -2.06
HIF1A-212ENST00000557538 IFIT1BQ5T764 474 aaKnown RBP2.21□□□□□ -2.06
HIF1A-212ENST00000557538 MAMDC4Q6UXC1 1216 aa2.21□□□□□ -2.06
HIF1A-212ENST00000557538 FAM124AQ86V42 546 aa2.21□□□□□ -2.06
HIF1A-212ENST00000557538 KBTBD2Q8IY47 623 aa2.21□□□□□ -2.06
HIF1A-212ENST00000557538 DRC7Q8IY82 874 aa2.21□□□□□ -2.06
HIF1A-212ENST00000557538 TGFBRAP1Q8WUH2 860 aa2.21□□□□□ -2.06
HIF1A-212ENST00000557538 BRI3BPQ8WY22 251 aa2.21□□□□□ -2.06
HIF1A-212ENST00000557538 IL17RAQ96F46 866 aa2.21□□□□□ -2.06
HIF1A-212ENST00000557538 NEIL1Q96FI4 390 aaPredicted RBP2.21□□□□□ -2.06
HIF1A-212ENST00000557538 CDK5RAP3Q96JB5 506 aa2.21□□□□□ -2.06
HIF1A-212ENST00000557538 UIMC1Q96RL1 719 aa2.21□□□□□ -2.06
HIF1A-212ENST00000557538 RBM15Q96T37 977 aaKnown RBP eCLIP2.21□□□□□ -2.06
HIF1A-212ENST00000557538 NUP62CLQ9H1M0 184 aa2.21□□□□□ -2.06
HIF1A-212ENST00000557538 KLHL11Q9NVR0 708 aa2.21□□□□□ -2.06
HIF1A-212ENST00000557538 EDARQ9UNE0 448 aa2.21□□□□□ -2.06
HIF1A-212ENST00000557538 KLRG2A4D1S0 409 aaPredicted RBP2.2□□□□□ -2.06
HIF1A-212ENST00000557538 HOXA3O43365 443 aaPredicted RBP2.2□□□□□ -2.06
HIF1A-212ENST00000557538 CTNND1O60716 968 aaKnown RBP2.2□□□□□ -2.06
HIF1A-212ENST00000557538 KRT18P05783 430 aaKnown RBP2.2□□□□□ -2.06
HIF1A-212ENST00000557538 C8AP07357 584 aa2.2□□□□□ -2.06
HIF1A-212ENST00000557538 MYF5P13349 255 aa2.2□□□□□ -2.06
HIF1A-212ENST00000557538 GSPT1P15170 499 aaKnown RBP2.2□□□□□ -2.06
HIF1A-212ENST00000557538 CFPP27918 469 aa2.2□□□□□ -2.06
HIF1A-212ENST00000557538 HTR1BP28222 390 aa2.2□□□□□ -2.06
HIF1A-212ENST00000557538 KCNC1P48547 511 aa2.2□□□□□ -2.06
HIF1A-212ENST00000557538 GZMKP49863 264 aa2.2□□□□□ -2.06
HIF1A-212ENST00000557538 PTH1RQ03431 593 aa2.2□□□□□ -2.06
HIF1A-212ENST00000557538 FGL2Q14314 439 aa2.2□□□□□ -2.06
HIF1A-212ENST00000557538 TBR1Q16650 682 aa2.2□□□□□ -2.06
HIF1A-212ENST00000557538 PABPC1LQ4VXU2 614 aaKnown RBP2.2□□□□□ -2.06
HIF1A-212ENST00000557538 MAEAQ7L5Y9 396 aa2.2□□□□□ -2.06
HIF1A-212ENST00000557538 OTOP2Q7RTS6 562 aa2.2□□□□□ -2.06
HIF1A-212ENST00000557538 DPP9Q86TI2 863 aa2.2□□□□□ -2.06
HIF1A-212ENST00000557538 GPR135Q8IZ08 494 aa2.2□□□□□ -2.06
HIF1A-212ENST00000557538 NLGN4YQ8NFZ3 816 aaPredicted RBP2.2□□□□□ -2.06
HIF1A-212ENST00000557538 ZSCAN18Q8TBC5 510 aaPredicted RBP2.2□□□□□ -2.06
HIF1A-212ENST00000557538 ZNF384Q8TF68 577 aa2.2□□□□□ -2.06
HIF1A-212ENST00000557538 EDAQ92838 391 aa2.2□□□□□ -2.06
HIF1A-212ENST00000557538 DDX17Q92841 729 aaKnown RBP2.2□□□□□ -2.06
HIF1A-212ENST00000557538 GJA10Q969M2 543 aa2.2□□□□□ -2.06
HIF1A-212ENST00000557538 RGMAQ96B86 450 aa2.2□□□□□ -2.06
HIF1A-212ENST00000557538 C7orf25Q9BPX7 421 aa2.2□□□□□ -2.06
HIF1A-212ENST00000557538 XYLT2Q9H1B5 865 aa2.2□□□□□ -2.06
HIF1A-212ENST00000557538 CAPN11Q9UMQ6 739 aa2.2□□□□□ -2.06
HIF1A-212ENST00000557538 UTP18Q9Y5J1 556 aaKnown RBP eCLIP2.2□□□□□ -2.06
HIF1A-212ENST00000557538 APOL3O95236 402 aa2.2□□□□□ -2.06
HIF1A-212ENST00000557538 AMHP03971 560 aa2.2□□□□□ -2.06
HIF1A-212ENST00000557538 ITGB3P05106 788 aa2.2□□□□□ -2.06
HIF1A-212ENST00000557538 ZNF888P0CJ79 500 aaPredicted RBP2.2□□□□□ -2.06
HIF1A-212ENST00000557538 MTHFD1P11586 935 aaKnown RBP2.2□□□□□ -2.06
HIF1A-212ENST00000557538 CACNB3P54284 484 aa2.2□□□□□ -2.06
HIF1A-212ENST00000557538 WNT3P56703 355 aa2.2□□□□□ -2.06
HIF1A-212ENST00000557538 DUSP2Q05923 314 aa2.2□□□□□ -2.06
HIF1A-212ENST00000557538 ADAM15Q13444 863 aa2.2□□□□□ -2.06
HIF1A-212ENST00000557538 METRNLQ641Q3 311 aa2.2□□□□□ -2.06
HIF1A-212ENST00000557538 Q6ZSN1 163 aa2.2□□□□□ -2.06
HIF1A-212ENST00000557538 OR52N2Q8NGI0 321 aa2.2□□□□□ -2.06
HIF1A-212ENST00000557538 MRGPRX1Q96LB2 322 aa2.2□□□□□ -2.06
HIF1A-212ENST00000557538 CGRRF1Q99675 332 aa2.2□□□□□ -2.06
HIF1A-212ENST00000557538 SMAD5Q99717 465 aaKnown RBP2.2□□□□□ -2.06
HIF1A-212ENST00000557538 JKAMPQ9P055 326 aa2.2□□□□□ -2.06
HIF1A-212ENST00000557538 DNAI1Q9UI46 699 aa2.2□□□□□ -2.06
HIF1A-212ENST00000557538 JAG2Q9Y219 1238 aa2.2□□□□□ -2.06
HIF1A-212ENST00000557538 MED16Q9Y2X0 877 aa2.2□□□□□ -2.06
HIF1A-212ENST00000557538 VSTM5A8MXK1 200 aa2.19□□□□□ -2.06
HIF1A-212ENST00000557538 DIRC3C9JPN6 131 aa2.19□□□□□ -2.06
HIF1A-212ENST00000557538 TPP1O14773 563 aa2.19□□□□□ -2.06
HIF1A-212ENST00000557538 AP1G1O43747 822 aa2.19□□□□□ -2.06
HIF1A-212ENST00000557538 TOX4O94842 621 aa2.19□□□□□ -2.06
HIF1A-212ENST00000557538 SLC5A1P13866 664 aa2.19□□□□□ -2.06
HIF1A-212ENST00000557538 EN2P19622 333 aaPredicted RBP2.19□□□□□ -2.06
HIF1A-212ENST00000557538 MALP21145 153 aa2.19□□□□□ -2.06
HIF1A-212ENST00000557538 MAP2K6P52564 334 aa2.19□□□□□ -2.06
HIF1A-212ENST00000557538 SNAPC2Q13487 334 aa2.19□□□□□ -2.06
HIF1A-212ENST00000557538 GRM3Q14832 879 aa2.19□□□□□ -2.06
HIF1A-212ENST00000557538 PKN1Q16512 942 aa2.19□□□□□ -2.06
HIF1A-212ENST00000557538 POLNQ7Z5Q5 900 aa2.19□□□□□ -2.06
HIF1A-212ENST00000557538 KLHDC4Q8TBB5 520 aa2.19□□□□□ -2.06
HIF1A-212ENST00000557538 PHKBQ93100 1093 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms