RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 USP41Q3LFD5 358 aa15.63■□□□□ 0.09
SLIRP-210ENST00000557431 GRASPQ7Z6J2 395 aaPredicted RBP15.63■□□□□ 0.09
SLIRP-210ENST00000557431 CEP57Q86XR8 500 aa15.63■□□□□ 0.09
SLIRP-210ENST00000557431 IFNLR1Q8IU57 520 aaPredicted RBP15.63■□□□□ 0.09
SLIRP-210ENST00000557431 STAMQ92783 540 aa15.63■□□□□ 0.09
SLIRP-210ENST00000557431 CCDC51Q96ER9 411 aa15.63■□□□□ 0.09
SLIRP-210ENST00000557431 FOXQ1Q9C009 403 aa15.63■□□□□ 0.09
SLIRP-210ENST00000557431 TMEM60Q9H2L4 133 aa15.63■□□□□ 0.09
SLIRP-210ENST00000557431 TTC12Q9H892 705 aaPredicted RBP15.63■□□□□ 0.09
SLIRP-210ENST00000557431 POLD4Q9HCU8 107 aa15.63■□□□□ 0.09
SLIRP-210ENST00000557431 EPS15L1Q9UBC2 864 aa15.63■□□□□ 0.09
SLIRP-210ENST00000557431 STK39Q9UEW8 545 aa15.63■□□□□ 0.09
SLIRP-210ENST00000557431 PCDHA12Q9UN75 941 aa15.63■□□□□ 0.09
SLIRP-210ENST00000557431 NUMBLQ9Y6R0 609 aa15.63■□□□□ 0.09
SLIRP-210ENST00000557431 BTBD18B2RXH4 712 aa15.62■□□□□ 0.09
SLIRP-210ENST00000557431 ADAM12O43184 909 aa15.62■□□□□ 0.09
SLIRP-210ENST00000557431 JAK2O60674 1132 aa15.62■□□□□ 0.09
SLIRP-210ENST00000557431 NR1I2O75469 434 aa15.62■□□□□ 0.09
SLIRP-210ENST00000557431 TADA2AO75478 443 aa15.62■□□□□ 0.09
SLIRP-210ENST00000557431 DGAT1O75907 488 aa15.62■□□□□ 0.09
SLIRP-210ENST00000557431 KIF4AO95239 1232 aa15.62■□□□□ 0.09
SLIRP-210ENST00000557431 SRFP11831 508 aa15.62■□□□□ 0.09
SLIRP-210ENST00000557431 LAMP2P13473 410 aa15.62■□□□□ 0.09
SLIRP-210ENST00000557431 ATP2B1P20020 1258 aa15.62■□□□□ 0.09
SLIRP-210ENST00000557431 HTR4Q13639 388 aa15.62■□□□□ 0.09
SLIRP-210ENST00000557431 SLC27A1Q6PCB7 646 aa15.62■□□□□ 0.09
SLIRP-210ENST00000557431 LILRA6Q6PI73 481 aa15.62■□□□□ 0.09
SLIRP-210ENST00000557431 FAM177A1Q8N128 213 aaPredicted RBP15.62■□□□□ 0.09
SLIRP-210ENST00000557431 KCNG4Q8TDN1 519 aa15.62■□□□□ 0.09
SLIRP-210ENST00000557431 BSNDQ8WZ55 320 aa15.62■□□□□ 0.09
SLIRP-210ENST00000557431 HSD17B14Q9BPX1 270 aa15.62■□□□□ 0.09
SLIRP-210ENST00000557431 PRKD2Q9BZL6 878 aa15.62■□□□□ 0.09
SLIRP-210ENST00000557431 SNTG2Q9NY99 539 aa15.62■□□□□ 0.09
SLIRP-210ENST00000557431 WNT16Q9UBV4 365 aa15.62■□□□□ 0.09
SLIRP-210ENST00000557431 RALGAPA1Q6GYQ0 2036 aa15.61■□□□□ 0.09
SLIRP-210ENST00000557431 KIF26AQ9ULI4 1882 aaPredicted RBP15.61■□□□□ 0.09
SLIRP-210ENST00000557431 PTGESO14684 152 aa15.61■□□□□ 0.09
SLIRP-210ENST00000557431 CCL16O15467 120 aa15.61■□□□□ 0.09
SLIRP-210ENST00000557431 ZMYND10O75800 440 aa15.61■□□□□ 0.09
SLIRP-210ENST00000557431 GLULP15104 373 aa15.61■□□□□ 0.09
SLIRP-210ENST00000557431 ID4P47928 161 aa15.61■□□□□ 0.09
SLIRP-210ENST00000557431 GUCY1B3Q02153 619 aa15.61■□□□□ 0.09
SLIRP-210ENST00000557431 NCBP1Q09161 790 aaKnown RBP15.61■□□□□ 0.09
SLIRP-210ENST00000557431 HSP90AA2PQ14568 343 aaPredicted RBP15.61■□□□□ 0.09
SLIRP-210ENST00000557431 FAM171A1Q5VUB5 890 aa15.61■□□□□ 0.09
SLIRP-210ENST00000557431 PARM1Q6UWI2 310 aa15.61■□□□□ 0.09
SLIRP-210ENST00000557431 FGF14Q92915 247 aa15.61■□□□□ 0.09
SLIRP-210ENST00000557431 NAP1L4Q99733 375 aaKnown RBP15.61■□□□□ 0.09
SLIRP-210ENST00000557431 CLSTN3Q9BQT9 956 aa15.61■□□□□ 0.09
SLIRP-210ENST00000557431 ARHGEF3Q9NR81 526 aa15.61■□□□□ 0.09
SLIRP-210ENST00000557431 ANKEF1Q9NU02 776 aa15.61■□□□□ 0.09
SLIRP-210ENST00000557431 POLIQ9UNA4 740 aa15.61■□□□□ 0.09
SLIRP-210ENST00000557431 OTOGLQ3ZCN5 2332 aa15.6■□□□□ 0.09
SLIRP-210ENST00000557431 A0A1B0GUA9 196 aa15.6■□□□□ 0.09
SLIRP-210ENST00000557431 NEMFO60524 1076 aa15.6■□□□□ 0.09
SLIRP-210ENST00000557431 MED24O75448 989 aa15.6■□□□□ 0.09
SLIRP-210ENST00000557431 RECQL4O94761 1208 aa15.6■□□□□ 0.09
SLIRP-210ENST00000557431 LYPLA2O95372 231 aa15.6■□□□□ 0.09
SLIRP-210ENST00000557431 SPATA31C1P0DKV0 1188 aa15.6■□□□□ 0.09
SLIRP-210ENST00000557431 PSMD5Q16401 504 aa15.6■□□□□ 0.09
SLIRP-210ENST00000557431 ME3Q16798 604 aa15.6■□□□□ 0.09
SLIRP-210ENST00000557431 GLRA4Q5JXX5 417 aa15.6■□□□□ 0.09
SLIRP-210ENST00000557431 EEF1DP3Q658K8 133 aa15.6■□□□□ 0.09
SLIRP-210ENST00000557431 ELMSAN1Q6PJG2 1045 aa15.6■□□□□ 0.09
SLIRP-210ENST00000557431 NOSTRINQ8IVI9 506 aa15.6■□□□□ 0.09
SLIRP-210ENST00000557431 DIS3L2Q8IYB7 885 aaKnown RBP15.6■□□□□ 0.09
SLIRP-210ENST00000557431 HACE1Q8IYU2 909 aa15.6■□□□□ 0.09
SLIRP-210ENST00000557431 KIFC3Q9BVG8 833 aa15.6■□□□□ 0.09
SLIRP-210ENST00000557431 PLEKHA4Q9H4M7 779 aa15.6■□□□□ 0.09
SLIRP-210ENST00000557431 PDZD7Q9H5P4 517 aa15.6■□□□□ 0.09
SLIRP-210ENST00000557431 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.6■□□□□ 0.094e-7■■□□□ 12.6
SLIRP-210ENST00000557431 HCFC1R1Q9NWW0 138 aa15.6■□□□□ 0.09
SLIRP-210ENST00000557431 FNIP2Q9P278 1114 aa15.6■□□□□ 0.09
SLIRP-210ENST00000557431 FBXW11Q9UKB1 542 aa15.6■□□□□ 0.09
SLIRP-210ENST00000557431 ANHXE9PGG2 379 aa15.59■□□□□ 0.09
SLIRP-210ENST00000557431 EPB41L2O43491 1005 aaKnown RBP15.59■□□□□ 0.09
SLIRP-210ENST00000557431 C8AP07357 584 aa15.59■□□□□ 0.09
SLIRP-210ENST00000557431 FSHRP23945 695 aa15.59■□□□□ 0.09
SLIRP-210ENST00000557431 POU5F1BQ06416 359 aa15.59■□□□□ 0.09
SLIRP-210ENST00000557431 TUSC3Q13454 348 aa15.59■□□□□ 0.09
SLIRP-210ENST00000557431 TMEM132AQ24JP5 1023 aa15.59■□□□□ 0.09
SLIRP-210ENST00000557431 DCLRE1AQ6PJP8 1040 aa15.59■□□□□ 0.09
SLIRP-210ENST00000557431 KIAA2013Q8IYS2 634 aa15.59■□□□□ 0.09
SLIRP-210ENST00000557431 NSUN7Q8NE18 718 aaKnown RBP15.59■□□□□ 0.09
SLIRP-210ENST00000557431 ITFG1Q8TB96 612 aa15.59■□□□□ 0.09
SLIRP-210ENST00000557431 LNX1Q8TBB1 728 aaPredicted RBP15.59■□□□□ 0.09
SLIRP-210ENST00000557431 HDAC7Q8WUI4 952 aa15.59■□□□□ 0.09
SLIRP-210ENST00000557431 ING5Q8WYH8 240 aa15.59■□□□□ 0.09
SLIRP-210ENST00000557431 RHOBTB2Q9BYZ6 727 aa15.59■□□□□ 0.09
SLIRP-210ENST00000557431 ZDHHC7Q9NXF8 308 aa15.59■□□□□ 0.09
SLIRP-210ENST00000557431 DLGAP2Q9P1A6 1054 aa15.59■□□□□ 0.09
SLIRP-210ENST00000557431 DPP7Q9UHL4 492 aa15.59■□□□□ 0.09
SLIRP-210ENST00000557431 GDAQ9Y2T3 454 aa15.59■□□□□ 0.09
SLIRP-210ENST00000557431 SF3B1O75533 1304 aaKnown RBP eCLIP15.59■□□□□ 0.09
SLIRP-210ENST00000557431 COL4A2P08572 1712 aa15.58■□□□□ 0.08
SLIRP-210ENST00000557431 I3L4J1 428 aa15.58■□□□□ 0.08
SLIRP-210ENST00000557431 MCM7P33993 719 aa15.58■□□□□ 0.08
SLIRP-210ENST00000557431 GPC5P78333 572 aa15.58■□□□□ 0.08
SLIRP-210ENST00000557431 ST3GAL1Q11201 340 aa15.58■□□□□ 0.08
SLIRP-210ENST00000557431 SNW1Q13573 536 aaKnown RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms