RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 LIG1P18858 919 aa13.88□□□□□ -0.19
SHMT2-230ENST00000557427 SHC2P98077 582 aa13.88□□□□□ -0.19
SHMT2-230ENST00000557427 DMWDQ09019 674 aa13.88□□□□□ -0.19
SHMT2-230ENST00000557427 NR5A1Q13285 461 aa13.88□□□□□ -0.19
SHMT2-230ENST00000557427 FZD5Q13467 585 aa13.88□□□□□ -0.19
SHMT2-230ENST00000557427 TRIM29Q14134 588 aa13.88□□□□□ -0.19
SHMT2-230ENST00000557427 UBXN2BQ14CS0 331 aa13.88□□□□□ -0.19
SHMT2-230ENST00000557427 EARS2Q5JPH6 523 aaKnown RBP13.88□□□□□ -0.19
SHMT2-230ENST00000557427 N4BP2L1Q5TBK1 243 aaPredicted RBP13.88□□□□□ -0.19
SHMT2-230ENST00000557427 PARM1Q6UWI2 310 aa13.88□□□□□ -0.19
SHMT2-230ENST00000557427 CYP26C1Q6V0L0 522 aa13.88□□□□□ -0.19
SHMT2-230ENST00000557427 MIER3Q7Z3K6 550 aa13.88□□□□□ -0.19
SHMT2-230ENST00000557427 SMG7Q92540 1137 aaKnown RBP13.88□□□□□ -0.19
SHMT2-230ENST00000557427 FUCA2Q9BTY2 467 aa13.88□□□□□ -0.19
SHMT2-230ENST00000557427 OSBPL6Q9BZF3 934 aa13.88□□□□□ -0.19
SHMT2-230ENST00000557427 NUP62CLQ9H1M0 184 aa13.88□□□□□ -0.19
SHMT2-230ENST00000557427 NRBP2Q9NSY0 501 aa13.88□□□□□ -0.19
SHMT2-230ENST00000557427 GMEB2Q9UKD1 530 aa13.88□□□□□ -0.19
SHMT2-230ENST00000557427 DOCK6Q96HP0 2047 aa13.87□□□□□ -0.19
SHMT2-230ENST00000557427 FAM205CA6NFA0 338 aa13.87□□□□□ -0.19
SHMT2-230ENST00000557427 TEX28O15482 410 aa13.87□□□□□ -0.19
SHMT2-230ENST00000557427 SLC37A4O43826 429 aa13.87□□□□□ -0.19
SHMT2-230ENST00000557427 CSDE1O75534 798 aaKnown RBP13.87□□□□□ -0.19
SHMT2-230ENST00000557427 OFD1O75665 1012 aa13.87□□□□□ -0.19
SHMT2-230ENST00000557427 PSMD10O75832 226 aa13.87□□□□□ -0.19
SHMT2-230ENST00000557427 DDHD2O94830 711 aa13.87□□□□□ -0.19
SHMT2-230ENST00000557427 SPATA31D3P0C874 917 aa13.87□□□□□ -0.19
SHMT2-230ENST00000557427 TDGF1P13385 188 aa13.87□□□□□ -0.19
SHMT2-230ENST00000557427 DARSP14868 501 aaKnown RBP13.87□□□□□ -0.19
SHMT2-230ENST00000557427 KRT2P35908 639 aa13.87□□□□□ -0.19
SHMT2-230ENST00000557427 MLF2Q15773 248 aaPredicted RBP13.87□□□□□ -0.19
SHMT2-230ENST00000557427 UVSSAQ2YD98 709 aa13.87□□□□□ -0.19
SHMT2-230ENST00000557427 SLC44A4Q53GD3 710 aa13.87□□□□□ -0.19
SHMT2-230ENST00000557427 RBM43Q6ZSC3 357 aaKnown RBP13.87□□□□□ -0.19
SHMT2-230ENST00000557427 SPATA31D4Q6ZUB0 917 aa13.87□□□□□ -0.19
SHMT2-230ENST00000557427 GET4Q7L5D6 327 aaPredicted RBP13.87□□□□□ -0.19
SHMT2-230ENST00000557427 TAS1R1Q7RTX1 841 aa13.87□□□□□ -0.19
SHMT2-230ENST00000557427 NEK8Q86SG6 692 aa13.87□□□□□ -0.19
SHMT2-230ENST00000557427 CLDN23Q96B33 292 aa13.87□□□□□ -0.19
SHMT2-230ENST00000557427 BRMS1Q9HCU9 246 aa13.87□□□□□ -0.19
SHMT2-230ENST00000557427 LTB4R2Q9NPC1 389 aa13.87□□□□□ -0.19
SHMT2-230ENST00000557427 PRMT8Q9NR22 394 aaPredicted RBP13.87□□□□□ -0.19
SHMT2-230ENST00000557427 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.87□□□□□ -0.19
SHMT2-230ENST00000557427 CEP295Q9C0D2 2601 aa13.87□□□□□ -0.19
SHMT2-230ENST00000557427 SHISA7A6NL88 538 aa13.86□□□□□ -0.19
SHMT2-230ENST00000557427 BTBD18B2RXH4 712 aa13.86□□□□□ -0.19
SHMT2-230ENST00000557427 C2CD2LO14523 706 aa13.86□□□□□ -0.19
SHMT2-230ENST00000557427 PROS1P07225 676 aa13.86□□□□□ -0.19
SHMT2-230ENST00000557427 U2AF2P26368 475 aaKnown RBP eCLIP13.86□□□□□ -0.19
SHMT2-230ENST00000557427 PHKA2P46019 1235 aa13.86□□□□□ -0.19
SHMT2-230ENST00000557427 AFF1P51825 1210 aaKnown RBP13.86□□□□□ -0.19
SHMT2-230ENST00000557427 JAK3P52333 1124 aa13.86□□□□□ -0.19
SHMT2-230ENST00000557427 UGCGQ16739 394 aa13.86□□□□□ -0.19
SHMT2-230ENST00000557427 NOMO2Q5JPE7 1267 aa13.86□□□□□ -0.19
SHMT2-230ENST00000557427 EFCAB12Q6NXP0 572 aa13.86□□□□□ -0.19
SHMT2-230ENST00000557427 LRRC71Q8N4P6 559 aa13.86□□□□□ -0.19
SHMT2-230ENST00000557427 ETNPPLQ8TBG4 499 aa13.86□□□□□ -0.19
SHMT2-230ENST00000557427 MBOAT7Q96N66 472 aa13.86□□□□□ -0.19
SHMT2-230ENST00000557427 NT5C3AQ9H0P0 336 aa13.86□□□□□ -0.19
SHMT2-230ENST00000557427 GBP3Q9H0R5 595 aa13.86□□□□□ -0.19
SHMT2-230ENST00000557427 CLSTN2Q9H4D0 955 aa13.86□□□□□ -0.19
SHMT2-230ENST00000557427 MRPL17Q9NRX2 175 aaKnown RBP13.86□□□□□ -0.19
SHMT2-230ENST00000557427 AKT3Q9Y243 479 aa13.86□□□□□ -0.19
SHMT2-230ENST00000557427 INPP5FQ9Y2H2 1132 aa13.86□□□□□ -0.19
SHMT2-230ENST00000557427 A0A1W2PQ27 194 aa13.85□□□□□ -0.19
SHMT2-230ENST00000557427 A0A1W2PQ64 194 aa13.85□□□□□ -0.19
SHMT2-230ENST00000557427 A0A1W2PQD8 194 aa13.85□□□□□ -0.19
SHMT2-230ENST00000557427 ZNF862O60290 1169 aa13.85□□□□□ -0.19
SHMT2-230ENST00000557427 ATP2B1P20020 1258 aa13.85□□□□□ -0.19
SHMT2-230ENST00000557427 KCNA4P22459 653 aa13.85□□□□□ -0.19
SHMT2-230ENST00000557427 TARSP26639 723 aaKnown RBP13.85□□□□□ -0.19
SHMT2-230ENST00000557427 SFNP31947 248 aa13.85□□□□□ -0.19
SHMT2-230ENST00000557427 GPC3P51654 580 aa13.85□□□□□ -0.19
SHMT2-230ENST00000557427 PRKCQQ04759 706 aa13.85□□□□□ -0.19
SHMT2-230ENST00000557427 PPP4R3AQ6IN85 833 aa13.85□□□□□ -0.19
SHMT2-230ENST00000557427 MOXD1Q6UVY6 613 aa13.85□□□□□ -0.19
SHMT2-230ENST00000557427 LINC00301Q8NCQ3 95 aa13.85□□□□□ -0.19
SHMT2-230ENST00000557427 RPS6KC1Q96S38 1066 aa13.85□□□□□ -0.19
SHMT2-230ENST00000557427 SEMA4GQ9NTN9 838 aa13.85□□□□□ -0.19
SHMT2-230ENST00000557427 DACT1Q9NYF0 836 aa13.85□□□□□ -0.19
SHMT2-230ENST00000557427 EML1O00423 815 aa13.84□□□□□ -0.19
SHMT2-230ENST00000557427 TM4SF5O14894 197 aa13.84□□□□□ -0.19
SHMT2-230ENST00000557427 EFEMP2O95967 443 aa13.84□□□□□ -0.19
SHMT2-230ENST00000557427 GLUD1P00367 558 aa13.84□□□□□ -0.19
SHMT2-230ENST00000557427 OATP04181 439 aa13.84□□□□□ -0.19
SHMT2-230ENST00000557427 CCDC192P0DO97 292 aa13.84□□□□□ -0.19
SHMT2-230ENST00000557427 PRKCEQ02156 737 aa13.84□□□□□ -0.19
SHMT2-230ENST00000557427 CEBPZQ03701 1054 aaKnown RBP13.84□□□□□ -0.19
SHMT2-230ENST00000557427 RNASELQ05823 741 aaKnown RBP13.84□□□□□ -0.19
SHMT2-230ENST00000557427 MTAPQ13126 283 aa13.84□□□□□ -0.19
SHMT2-230ENST00000557427 STK38Q15208 465 aa13.84□□□□□ -0.19
SHMT2-230ENST00000557427 ZBTB41Q5SVQ8 909 aa13.84□□□□□ -0.19
SHMT2-230ENST00000557427 ADALQ6DHV7 355 aa13.84□□□□□ -0.19
SHMT2-230ENST00000557427 LAIR1Q6GTX8 287 aa13.84□□□□□ -0.19
SHMT2-230ENST00000557427 PRR23CQ6ZRP0 262 aa13.84□□□□□ -0.19
SHMT2-230ENST00000557427 DIS3L2Q8IYB7 885 aaKnown RBP13.84□□□□□ -0.19
SHMT2-230ENST00000557427 FAM167AQ96KS9 214 aa13.84□□□□□ -0.19
SHMT2-230ENST00000557427 SH2D3AQ9BRG2 576 aa13.84□□□□□ -0.19
SHMT2-230ENST00000557427 TRAIPQ9BWF2 469 aa13.84□□□□□ -0.19
SHMT2-230ENST00000557427 TNMDQ9H2S6 317 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms