RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 NMT1P30419 496 aaKnown RBP13.67□□□□□ -0.22
SLIRP-209ENST00000557342 ANP32AP39687 249 aaKnown RBP13.67□□□□□ -0.22
SLIRP-209ENST00000557342 SLC11A1P49279 550 aa13.67□□□□□ -0.22
SLIRP-209ENST00000557342 DSC1Q08554 894 aa13.67□□□□□ -0.22
SLIRP-209ENST00000557342 ALCAMQ13740 583 aa13.67□□□□□ -0.22
SLIRP-209ENST00000557342 NOLC1Q14978 699 aaKnown RBP eCLIP13.67□□□□□ -0.22
SLIRP-209ENST00000557342 KYAT1Q16773 422 aa13.67□□□□□ -0.22
SLIRP-209ENST00000557342 AAK1Q2M2I8 961 aa13.67□□□□□ -0.22
SLIRP-209ENST00000557342 HERC4Q5GLZ8 1057 aaPredicted RBP13.67□□□□□ -0.22
SLIRP-209ENST00000557342 ZNF720Q7Z2F6 126 aa13.67□□□□□ -0.22
SLIRP-209ENST00000557342 ZBTB33Q86T24 672 aa13.67□□□□□ -0.22
SLIRP-209ENST00000557342 COLGALT2Q8IYK4 626 aa13.67□□□□□ -0.22
SLIRP-209ENST00000557342 CEP57L1Q8IYX8 460 aa13.67□□□□□ -0.22
SLIRP-209ENST00000557342 GSTCDQ8NEC7 633 aa13.67□□□□□ -0.22
SLIRP-209ENST00000557342 ATXN2LQ8WWM7 1075 aaKnown RBP13.67□□□□□ -0.22
SLIRP-209ENST00000557342 HLA-CQ95604 372 aa13.67□□□□□ -0.22
SLIRP-209ENST00000557342 ACAP3Q96P50 834 aa13.67□□□□□ -0.22
SLIRP-209ENST00000557342 FIZ1Q96SL8 496 aa13.67□□□□□ -0.22
SLIRP-209ENST00000557342 COLEC11Q9BWP8 271 aa13.67□□□□□ -0.22
SLIRP-209ENST00000557342 ENTPD7Q9NQZ7 604 aa13.67□□□□□ -0.22
SLIRP-209ENST00000557342 OLFML3Q9NRN5 406 aa13.67□□□□□ -0.22
SLIRP-209ENST00000557342 ANKFY1Q9P2R3 1169 aa13.67□□□□□ -0.22
SLIRP-209ENST00000557342 USP25Q9UHP3 1055 aa13.67□□□□□ -0.22
SLIRP-209ENST00000557342 ABLIM1O14639 778 aa13.66□□□□□ -0.22
SLIRP-209ENST00000557342 NRP1O14786 923 aa13.66□□□□□ -0.22
SLIRP-209ENST00000557342 FSCN2O14926 492 aa13.66□□□□□ -0.22
SLIRP-209ENST00000557342 CSPG5O95196 566 aa13.66□□□□□ -0.22
SLIRP-209ENST00000557342 IRS1P35568 1242 aa13.66□□□□□ -0.22
SLIRP-209ENST00000557342 OR1G1P47890 313 aa13.66□□□□□ -0.22
SLIRP-209ENST00000557342 MCL1Q07820 350 aa13.66□□□□□ -0.22
SLIRP-209ENST00000557342 TUSC3Q13454 348 aa13.66□□□□□ -0.22
SLIRP-209ENST00000557342 SMC1AQ14683 1233 aaKnown RBP13.66□□□□□ -0.22
SLIRP-209ENST00000557342 CNNM4Q6P4Q7 775 aa13.66□□□□□ -0.22
SLIRP-209ENST00000557342 STXBP4Q6ZWJ1 553 aa13.66□□□□□ -0.22
SLIRP-209ENST00000557342 TMC7Q7Z402 723 aa13.66□□□□□ -0.22
SLIRP-209ENST00000557342 DDX53Q86TM3 631 aaKnown RBP13.66□□□□□ -0.22
SLIRP-209ENST00000557342 MAP4K3Q8IVH8 894 aa13.66□□□□□ -0.22
SLIRP-209ENST00000557342 STAMQ92783 540 aa13.66□□□□□ -0.22
SLIRP-209ENST00000557342 ZBTB45Q96K62 511 aaPredicted RBP13.66□□□□□ -0.22
SLIRP-209ENST00000557342 C7orf25Q9BPX7 421 aa13.66□□□□□ -0.22
SLIRP-209ENST00000557342 TCF25Q9BQ70 676 aa13.66□□□□□ -0.22
SLIRP-209ENST00000557342 TRIM9Q9C026 710 aa13.66□□□□□ -0.22
SLIRP-209ENST00000557342 CIZ1Q9ULV3 898 aaPredicted RBP13.66□□□□□ -0.22
SLIRP-209ENST00000557342 EXOC7Q9UPT5 735 aa13.66□□□□□ -0.22
SLIRP-209ENST00000557342 PCDHB13Q9Y5F0 798 aa13.66□□□□□ -0.22
SLIRP-209ENST00000557342 COL6A3P12111 3177 aa13.65□□□□□ -0.22
SLIRP-209ENST00000557342 A0A1W2PQ27 194 aa13.65□□□□□ -0.22
SLIRP-209ENST00000557342 A0A1W2PQ64 194 aa13.65□□□□□ -0.22
SLIRP-209ENST00000557342 A0A1W2PQD8 194 aa13.65□□□□□ -0.22
SLIRP-209ENST00000557342 B4GALT3O60512 393 aa13.65□□□□□ -0.22
SLIRP-209ENST00000557342 GCNT3O95395 438 aa13.65□□□□□ -0.22
SLIRP-209ENST00000557342 HARSP12081 509 aaKnown RBP13.65□□□□□ -0.22
SLIRP-209ENST00000557342 PFKFB1P16118 471 aa13.65□□□□□ -0.22
SLIRP-209ENST00000557342 ERVFC1P60507 584 aa13.65□□□□□ -0.22
SLIRP-209ENST00000557342 OSTNP61366 133 aa13.65□□□□□ -0.22
SLIRP-209ENST00000557342 ASIC1P78348 528 aa13.65□□□□□ -0.22
SLIRP-209ENST00000557342 MRPS5P82675 430 aaKnown RBP13.65□□□□□ -0.22
SLIRP-209ENST00000557342 ZC2HC1CQ53FD0 456 aaPredicted RBP13.65□□□□□ -0.22
SLIRP-209ENST00000557342 PLPP4Q5VZY2 271 aa13.65□□□□□ -0.22
SLIRP-209ENST00000557342 SLFN12LQ6IEE8 588 aa13.65□□□□□ -0.22
SLIRP-209ENST00000557342 TMEM173Q86WV6 379 aaPredicted RBP13.65□□□□□ -0.22
SLIRP-209ENST00000557342 VPS52Q8N1B4 723 aa13.65□□□□□ -0.22
SLIRP-209ENST00000557342 CEP120Q8N960 986 aa13.65□□□□□ -0.22
SLIRP-209ENST00000557342 PABPC5Q96DU9 382 aaKnown RBP13.65□□□□□ -0.22
SLIRP-209ENST00000557342 CHAMP1Q96JM3 812 aa13.65□□□□□ -0.22
SLIRP-209ENST00000557342 ACCSQ96QU6 501 aa13.65□□□□□ -0.22
SLIRP-209ENST00000557342 CDCA3Q99618 268 aaPredicted RBP13.65□□□□□ -0.22
SLIRP-209ENST00000557342 TLE6Q9H808 572 aa13.65□□□□□ -0.22
SLIRP-209ENST00000557342 PRDM6Q9NQX0 595 aa13.65□□□□□ -0.22
SLIRP-209ENST00000557342 MYO7AQ13402 2215 aa13.65□□□□□ -0.22
SLIRP-209ENST00000557342 ANK1P16157 1881 aa13.65□□□□□ -0.22
SLIRP-209ENST00000557342 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.64□□□□□ -0.23
SLIRP-209ENST00000557342 FAM237AA0A1B0GTK4 181 aa13.64□□□□□ -0.23
SLIRP-209ENST00000557342 A0A1B0GVL5 298 aa13.64□□□□□ -0.23
SLIRP-209ENST00000557342 PTGESO14684 152 aa13.64□□□□□ -0.23
SLIRP-209ENST00000557342 PPP1R37O75864 691 aa13.64□□□□□ -0.23
SLIRP-209ENST00000557342 SLFN14P0C7P3 912 aa13.64□□□□□ -0.23
SLIRP-209ENST00000557342 SYKP43405 635 aa13.64□□□□□ -0.23
SLIRP-209ENST00000557342 HYAL1Q12794 435 aa13.64□□□□□ -0.23
SLIRP-209ENST00000557342 COASYQ13057 564 aa13.64□□□□□ -0.23
SLIRP-209ENST00000557342 XKR4Q5GH76 650 aa13.64□□□□□ -0.23
SLIRP-209ENST00000557342 L1TD1Q5T7N2 865 aaKnown RBP13.64□□□□□ -0.23
SLIRP-209ENST00000557342 ALKAL1Q6UXT8 129 aa13.64□□□□□ -0.23
SLIRP-209ENST00000557342 UNC13DQ70J99 1090 aa13.64□□□□□ -0.23
SLIRP-209ENST00000557342 ADGRD2Q7Z7M1 963 aa13.64□□□□□ -0.23
SLIRP-209ENST00000557342 STRA6Q9BX79 667 aa13.64□□□□□ -0.23
SLIRP-209ENST00000557342 ZBP1Q9H171 429 aa13.64□□□□□ -0.23
SLIRP-209ENST00000557342 IGFLR1Q9H665 355 aa13.64□□□□□ -0.23
SLIRP-209ENST00000557342 UBE2ZQ9H832 354 aaPredicted RBP13.64□□□□□ -0.23
SLIRP-209ENST00000557342 PLEKHA5Q9HAU0 1116 aa13.64□□□□□ -0.23
SLIRP-209ENST00000557342 SLC38A7Q9NVC3 462 aa13.64□□□□□ -0.23
SLIRP-209ENST00000557342 TBC1D7Q9P0N9 293 aa13.64□□□□□ -0.23
SLIRP-209ENST00000557342 SERTAD1Q9UHV2 236 aa13.64□□□□□ -0.23
SLIRP-209ENST00000557342 HPSEQ9Y251 543 aa13.64□□□□□ -0.23
SLIRP-209ENST00000557342 SSX2IPQ9Y2D8 614 aa13.64□□□□□ -0.23
SLIRP-209ENST00000557342 PRG3Q9Y2Y8 225 aaPredicted RBP13.64□□□□□ -0.23
SLIRP-209ENST00000557342 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.64□□□□□ -0.23
SLIRP-209ENST00000557342 PVALEFA0A1B0GWK0 134 aa13.63□□□□□ -0.23
SLIRP-209ENST00000557342 GOLGA6L4A6NEF3 574 aa13.63□□□□□ -0.23
SLIRP-209ENST00000557342 OGTO15294 1046 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms