RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 PLBD2Q8NHP8 589 aa9.29□□□□□ -0.92
SYNE3-205ENST00000557275 ARL8AQ96BM9 186 aa9.29□□□□□ -0.92
SYNE3-205ENST00000557275 BLZF1Q9H2G9 400 aa9.29□□□□□ -0.92
SYNE3-205ENST00000557275 ADCY9O60503 1353 aa9.29□□□□□ -0.92
SYNE3-205ENST00000557275 WDR91A4D1P6 747 aa9.29□□□□□ -0.92
SYNE3-205ENST00000557275 MEI4A8MW99 385 aa9.29□□□□□ -0.92
SYNE3-205ENST00000557275 HIST1H2AGP0C0S8 130 aaPredicted RBP9.29□□□□□ -0.92
SYNE3-205ENST00000557275 HIST1H2ADP20671 130 aa9.29□□□□□ -0.92
SYNE3-205ENST00000557275 LIN54Q6MZP7 749 aa9.29□□□□□ -0.92
SYNE3-205ENST00000557275 DCUN1D1Q96GG9 259 aa9.29□□□□□ -0.92
SYNE3-205ENST00000557275 HIST1H2AHQ96KK5 128 aa9.29□□□□□ -0.92
SYNE3-205ENST00000557275 HIST1H2AJQ99878 128 aa9.29□□□□□ -0.92
SYNE3-205ENST00000557275 H2AFJQ9BTM1 129 aa9.29□□□□□ -0.92
SYNE3-205ENST00000557275 C20orf96Q9NUD7 363 aaPredicted RBP9.29□□□□□ -0.92
SYNE3-205ENST00000557275 RP1P56715 2156 aa9.29□□□□□ -0.92
SYNE3-205ENST00000557275 TYK2P29597 1187 aa9.29□□□□□ -0.92
SYNE3-205ENST00000557275 C2orf54Q08AI8 447 aa9.29□□□□□ -0.92
SYNE3-205ENST00000557275 SH3BP5LQ7L8J4 393 aa9.29□□□□□ -0.92
SYNE3-205ENST00000557275 CCDC60Q8IWA6 550 aaPredicted RBP9.29□□□□□ -0.92
SYNE3-205ENST00000557275 MRPL50Q8N5N7 158 aaKnown RBP9.29□□□□□ -0.92
SYNE3-205ENST00000557275 USP13Q92995 863 aaPredicted RBP9.29□□□□□ -0.92
SYNE3-205ENST00000557275 ZWILCHQ9H900 591 aa9.29□□□□□ -0.92
SYNE3-205ENST00000557275 CNOT3O75175 753 aaKnown RBP9.29□□□□□ -0.92
SYNE3-205ENST00000557275 SVOPQ8N4V2 548 aa9.29□□□□□ -0.92
SYNE3-205ENST00000557275 AMNQ9BXJ7 453 aa9.29□□□□□ -0.92
SYNE3-205ENST00000557275 CCDC87Q9NVE4 849 aa9.29□□□□□ -0.92
SYNE3-205ENST00000557275 GUCY1B2O75343 617 aa9.29□□□□□ -0.92
SYNE3-205ENST00000557275 GNAT1P11488 350 aa9.29□□□□□ -0.92
SYNE3-205ENST00000557275 KRT17Q04695 432 aa9.29□□□□□ -0.92
SYNE3-205ENST00000557275 SFSWAPQ12872 951 aaKnown RBP9.29□□□□□ -0.92
SYNE3-205ENST00000557275 MIGA2Q7L4E1 593 aa9.29□□□□□ -0.92
SYNE3-205ENST00000557275 KRT28Q7Z3Y7 464 aa9.29□□□□□ -0.92
SYNE3-205ENST00000557275 BEST2Q8NFU1 509 aa9.29□□□□□ -0.92
SYNE3-205ENST00000557275 EXOSC4Q9NPD3 245 aaKnown RBP9.29□□□□□ -0.92
SYNE3-205ENST00000557275 RGS18Q9NS28 235 aa9.29□□□□□ -0.92
SYNE3-205ENST00000557275 ATP6V1HQ9UI12 483 aa9.29□□□□□ -0.92
SYNE3-205ENST00000557275 ZNF644Q9H582 1327 aaPredicted RBP9.29□□□□□ -0.92
SYNE3-205ENST00000557275 PIPSLA2A3N6 862 aa9.29□□□□□ -0.92
SYNE3-205ENST00000557275 MAPK1P28482 360 aa9.29□□□□□ -0.92
SYNE3-205ENST00000557275 RUNDC3AQ59EK9 446 aa9.29□□□□□ -0.92
SYNE3-205ENST00000557275 SPATA21Q7Z572 469 aa9.29□□□□□ -0.92
SYNE3-205ENST00000557275 STKLD1Q8NE28 680 aa9.29□□□□□ -0.92
SYNE3-205ENST00000557275 RABGEF1Q9UJ41 708 aa9.29□□□□□ -0.92
SYNE3-205ENST00000557275 ATRXP46100 2492 aa9.29□□□□□ -0.92
SYNE3-205ENST00000557275 USP1O94782 785 aa9.29□□□□□ -0.92
SYNE3-205ENST00000557275 UFL1O94874 794 aa9.29□□□□□ -0.92
SYNE3-205ENST00000557275 GMFBP60983 142 aa9.29□□□□□ -0.92
SYNE3-205ENST00000557275 SPATA5Q8NB90 893 aa9.29□□□□□ -0.92
SYNE3-205ENST00000557275 SYMPKQ92797 1274 aaKnown RBP9.29□□□□□ -0.92
SYNE3-205ENST00000557275 ASIC4Q96FT7 647 aa9.29□□□□□ -0.92
SYNE3-205ENST00000557275 BPIFA3Q9BQP9 254 aa9.29□□□□□ -0.92
SYNE3-205ENST00000557275 RWDD4Q6NW29 188 aaKnown RBP9.28□□□□□ -0.92
SYNE3-205ENST00000557275 FBXO11Q86XK2 927 aa9.28□□□□□ -0.92
SYNE3-205ENST00000557275 KIAA0825Q8IV33 1275 aa9.28□□□□□ -0.92
SYNE3-205ENST00000557275 GANCQ8TET4 914 aa9.28□□□□□ -0.92
SYNE3-205ENST00000557275 SERPINB12Q96P63 405 aa9.28□□□□□ -0.92
SYNE3-205ENST00000557275 RRAGDQ9NQL2 400 aaPredicted RBP9.28□□□□□ -0.92
SYNE3-205ENST00000557275 AVENQ9NQS1 362 aaPredicted RBP9.28□□□□□ -0.92
SYNE3-205ENST00000557275 IP6K2Q9UHH9 426 aa9.28□□□□□ -0.92
SYNE3-205ENST00000557275 ANO4Q32M45 955 aa9.28□□□□□ -0.92
SYNE3-205ENST00000557275 ULK2Q8IYT8 1036 aa9.28□□□□□ -0.92
SYNE3-205ENST00000557275 CCNYL1Q8N7R7 359 aa9.28□□□□□ -0.92
SYNE3-205ENST00000557275 M0R2C6 588 aa9.28□□□□□ -0.92
SYNE3-205ENST00000557275 CDC40O60508 579 aaKnown RBP eCLIP9.28□□□□□ -0.92
SYNE3-205ENST00000557275 PDE8AO60658 829 aa9.28□□□□□ -0.92
SYNE3-205ENST00000557275 ROR1Q01973 937 aa9.28□□□□□ -0.92
SYNE3-205ENST00000557275 NAA35Q5VZE5 725 aa9.28□□□□□ -0.92
SYNE3-205ENST00000557275 TAF2Q6P1X5 1199 aa9.28□□□□□ -0.92
SYNE3-205ENST00000557275 EFHD2Q96C19 240 aaPredicted RBP9.28□□□□□ -0.92
SYNE3-205ENST00000557275 C8orf37Q96NL8 207 aa9.28□□□□□ -0.92
SYNE3-205ENST00000557275 TSEN34Q9BSV6 310 aaKnown RBP9.28□□□□□ -0.92
SYNE3-205ENST00000557275 SYNJ2BP-COX16A0A087WUM0 186 aa9.28□□□□□ -0.92
SYNE3-205ENST00000557275 SLC1A1P43005 524 aa9.28□□□□□ -0.92
SYNE3-205ENST00000557275 VSTM4Q8IW00 320 aa9.28□□□□□ -0.92
SYNE3-205ENST00000557275 CNDP1Q96KN2 507 aa9.28□□□□□ -0.92
SYNE3-205ENST00000557275 RPF1Q9H9Y2 349 aaKnown RBP9.28□□□□□ -0.92
SYNE3-205ENST00000557275 COX16Q9P0S2 106 aa9.28□□□□□ -0.92
SYNE3-205ENST00000557275 ZNF532Q9HCE3 1301 aa9.28□□□□□ -0.92
SYNE3-205ENST00000557275 MTSS1O43312 755 aa9.28□□□□□ -0.92
SYNE3-205ENST00000557275 CBFA2T3O75081 653 aa9.28□□□□□ -0.92
SYNE3-205ENST00000557275 TECP42680 631 aa9.28□□□□□ -0.92
SYNE3-205ENST00000557275 HSD17B4P51659 736 aa9.28□□□□□ -0.92
SYNE3-205ENST00000557275 RESTQ13127 1097 aa9.28□□□□□ -0.92
SYNE3-205ENST00000557275 PTGDRQ13258 359 aa9.28□□□□□ -0.92
SYNE3-205ENST00000557275 GTF2H3Q13889 308 aa9.28□□□□□ -0.92
SYNE3-205ENST00000557275 ZCWPW2Q504Y3 356 aa9.28□□□□□ -0.92
SYNE3-205ENST00000557275 FYNP06241 537 aa9.28□□□□□ -0.92
SYNE3-205ENST00000557275 HOXB6P17509 224 aaKnown RBP9.28□□□□□ -0.92
SYNE3-205ENST00000557275 FAM47CQ5HY64 1035 aa9.28□□□□□ -0.92
SYNE3-205ENST00000557275 LRIG3Q6UXM1 1119 aa9.28□□□□□ -0.92
SYNE3-205ENST00000557275 TMEM35BQ8NCS4 154 aa9.28□□□□□ -0.92
SYNE3-205ENST00000557275 PPP1R14AQ96A00 147 aa9.28□□□□□ -0.92
SYNE3-205ENST00000557275 VPS54Q9P1Q0 977 aa9.28□□□□□ -0.92
SYNE3-205ENST00000557275 SEPT9Q9UHD8 586 aaPredicted RBP9.28□□□□□ -0.92
SYNE3-205ENST00000557275 KLHL18O94889 574 aa9.28□□□□□ -0.92
SYNE3-205ENST00000557275 ATP5BP06576 529 aaKnown RBP9.28□□□□□ -0.92
SYNE3-205ENST00000557275 RCVRNP35243 200 aa9.28□□□□□ -0.92
SYNE3-205ENST00000557275 TFAMQ00059 246 aaKnown RBP9.28□□□□□ -0.92
SYNE3-205ENST00000557275 THEMIS2Q5TEJ8 643 aa9.28□□□□□ -0.92
SYNE3-205ENST00000557275 AKT3Q9Y243 479 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms