RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 NCLP19338 710 aaKnown RBP8.52□□□□□ -1.05
HNRNPC-226ENST00000556628 MUTP22033 750 aa8.52□□□□□ -1.05
HNRNPC-226ENST00000556628 RPA1P27694 616 aa8.52□□□□□ -1.05
HNRNPC-226ENST00000556628 ARL2P36404 184 aa8.52□□□□□ -1.05
HNRNPC-226ENST00000556628 CAPSQ13938 189 aa8.52□□□□□ -1.05
HNRNPC-226ENST00000556628 CES5AQ6NT32 575 aa8.52□□□□□ -1.05
HNRNPC-226ENST00000556628 ANKRD54Q6NXT1 300 aa8.52□□□□□ -1.05
HNRNPC-226ENST00000556628 TMEM184AQ6ZMB5 413 aa8.52□□□□□ -1.05
HNRNPC-226ENST00000556628 RNF19BQ6ZMZ0 732 aa8.52□□□□□ -1.05
HNRNPC-226ENST00000556628 AGMOQ6ZNB7 445 aa8.52□□□□□ -1.05
HNRNPC-226ENST00000556628 MAEAQ7L5Y9 396 aa8.52□□□□□ -1.05
HNRNPC-226ENST00000556628 DDX53Q86TM3 631 aaKnown RBP8.52□□□□□ -1.05
HNRNPC-226ENST00000556628 CATSPER3Q86XQ3 398 aa8.52□□□□□ -1.05
HNRNPC-226ENST00000556628 VPS52Q8N1B4 723 aa8.52□□□□□ -1.05
HNRNPC-226ENST00000556628 MRPL43Q8N983 215 aaKnown RBP8.52□□□□□ -1.05
HNRNPC-226ENST00000556628 SNIP1Q8TAD8 396 aaKnown RBP8.52□□□□□ -1.05
HNRNPC-226ENST00000556628 IGSF21Q96ID5 467 aa8.52□□□□□ -1.05
HNRNPC-226ENST00000556628 CPB2Q96IY4 423 aa8.52□□□□□ -1.05
HNRNPC-226ENST00000556628 TMEM175Q9BSA9 504 aa8.52□□□□□ -1.05
HNRNPC-226ENST00000556628 NFKBIZQ9BYH8 718 aa8.52□□□□□ -1.05
HNRNPC-226ENST00000556628 CSRNP2Q9H175 543 aa8.52□□□□□ -1.05
HNRNPC-226ENST00000556628 PRMT7Q9NVM4 692 aaPredicted RBP8.52□□□□□ -1.05
HNRNPC-226ENST00000556628 DBR1Q9UK59 544 aaKnown RBP8.52□□□□□ -1.05
HNRNPC-226ENST00000556628 FAN1Q9Y2M0 1017 aa8.52□□□□□ -1.05
HNRNPC-226ENST00000556628 IPPQ9Y573 584 aa8.52□□□□□ -1.05
HNRNPC-226ENST00000556628 C2orf71A6NGG8 1288 aa8.51□□□□□ -1.05
HNRNPC-226ENST00000556628 MEIS3P2A8K0S8 358 aa8.51□□□□□ -1.05
HNRNPC-226ENST00000556628 MED24O75448 989 aa8.51□□□□□ -1.05
HNRNPC-226ENST00000556628 POMCP01189 267 aa8.51□□□□□ -1.05
HNRNPC-226ENST00000556628 SPATA31C1P0DKV0 1188 aa8.51□□□□□ -1.05
HNRNPC-226ENST00000556628 CTSAP10619 480 aa8.51□□□□□ -1.05
HNRNPC-226ENST00000556628 GLRA2P23416 452 aa8.51□□□□□ -1.05
HNRNPC-226ENST00000556628 HOXA11P31270 313 aaPredicted RBP8.51□□□□□ -1.05
HNRNPC-226ENST00000556628 ANP32AP39687 249 aaKnown RBP8.51□□□□□ -1.05
HNRNPC-226ENST00000556628 CCT6AP40227 531 aaKnown RBP8.51□□□□□ -1.05
HNRNPC-226ENST00000556628 OR1G1P47890 313 aa8.51□□□□□ -1.05
HNRNPC-226ENST00000556628 SLC11A1P49279 550 aa8.51□□□□□ -1.05
HNRNPC-226ENST00000556628 MBTD1Q05BQ5 628 aa8.51□□□□□ -1.05
HNRNPC-226ENST00000556628 PPP2R5AQ15172 486 aa8.51□□□□□ -1.05
HNRNPC-226ENST00000556628 UBXN11Q5T124 520 aa8.51□□□□□ -1.05
HNRNPC-226ENST00000556628 MCTP1Q6DN14 999 aa8.51□□□□□ -1.05
HNRNPC-226ENST00000556628 SLC27A1Q6PCB7 646 aa8.51□□□□□ -1.05
HNRNPC-226ENST00000556628 ZNF280BQ86YH2 543 aa8.51□□□□□ -1.05
HNRNPC-226ENST00000556628 ASAP3Q8TDY4 903 aa8.51□□□□□ -1.05
HNRNPC-226ENST00000556628 RPGRIP1Q96KN7 1286 aa8.51□□□□□ -1.05
HNRNPC-226ENST00000556628 IFT74Q96LB3 600 aa8.51□□□□□ -1.05
HNRNPC-226ENST00000556628 RPS6KC1Q96S38 1066 aa8.51□□□□□ -1.05
HNRNPC-226ENST00000556628 APOL6Q9BWW8 343 aa8.51□□□□□ -1.05
HNRNPC-226ENST00000556628 EMILIN2Q9BXX0 1053 aa8.51□□□□□ -1.05
HNRNPC-226ENST00000556628 EIF2AQ9BY44 585 aaKnown RBP8.51□□□□□ -1.05
HNRNPC-226ENST00000556628 ZBP1Q9H171 429 aa8.51□□□□□ -1.05
HNRNPC-226ENST00000556628 C2orf40Q9H1Z8 148 aa8.51□□□□□ -1.05
HNRNPC-226ENST00000556628 DZANK1Q9NVP4 752 aa8.51□□□□□ -1.05
HNRNPC-226ENST00000556628 DNAJB4Q9UDY4 337 aa8.51□□□□□ -1.05
HNRNPC-226ENST00000556628 LRWD1Q9UFC0 647 aa8.51□□□□□ -1.05
HNRNPC-226ENST00000556628 SSX2IPQ9Y2D8 614 aa8.51□□□□□ -1.05
HNRNPC-226ENST00000556628 GIT1Q9Y2X7 761 aa8.51□□□□□ -1.05
HNRNPC-226ENST00000556628 HCFC2Q9Y5Z7 792 aa8.51□□□□□ -1.05
HNRNPC-226ENST00000556628 A0A087WWV3 80 aa8.5□□□□□ -1.05
HNRNPC-226ENST00000556628 H3BQV1 296 aa8.5□□□□□ -1.05
HNRNPC-226ENST00000556628 LAD1O00515 517 aa8.5□□□□□ -1.05
HNRNPC-226ENST00000556628 NRP1O14786 923 aa8.5□□□□□ -1.05
HNRNPC-226ENST00000556628 N4BP3O15049 544 aa8.5□□□□□ -1.05
HNRNPC-226ENST00000556628 CLASP2O75122 1294 aaKnown RBP8.5□□□□□ -1.05
HNRNPC-226ENST00000556628 DDHD2O94830 711 aa8.5□□□□□ -1.05
HNRNPC-226ENST00000556628 NPTXRO95502 500 aa8.5□□□□□ -1.05
HNRNPC-226ENST00000556628 ARF4P18085 180 aaPredicted RBP8.5□□□□□ -1.05
HNRNPC-226ENST00000556628 U2AF2P26368 475 aaKnown RBP eCLIP8.5□□□□□ -1.056e-16■■■■■ 52.2
HNRNPC-226ENST00000556628 KLRC2P26717 231 aa8.5□□□□□ -1.05
HNRNPC-226ENST00000556628 MLH1P40692 756 aa8.5□□□□□ -1.05
HNRNPC-226ENST00000556628 NAMPTP43490 491 aa8.5□□□□□ -1.05
HNRNPC-226ENST00000556628 MCM2P49736 904 aa8.5□□□□□ -1.05
HNRNPC-226ENST00000556628 RBM10P98175 930 aaKnown RBP8.5□□□□□ -1.05
HNRNPC-226ENST00000556628 ITIH3Q06033 890 aa8.5□□□□□ -1.05
HNRNPC-226ENST00000556628 KCNC3Q14003 757 aa8.5□□□□□ -1.05
HNRNPC-226ENST00000556628 PDIA5Q14554 519 aa8.5□□□□□ -1.05
HNRNPC-226ENST00000556628 CBX2Q14781 532 aaPredicted RBP8.5□□□□□ -1.05
HNRNPC-226ENST00000556628 KRT79Q5XKE5 535 aa8.5□□□□□ -1.05
HNRNPC-226ENST00000556628 ELMSAN1Q6PJG2 1045 aa8.5□□□□□ -1.05
HNRNPC-226ENST00000556628 ZBTB33Q86T24 672 aa8.5□□□□□ -1.05
HNRNPC-226ENST00000556628 PPFIBP1Q86W92 1011 aa8.5□□□□□ -1.05
HNRNPC-226ENST00000556628 RNF135Q8IUD6 432 aa8.5□□□□□ -1.05
HNRNPC-226ENST00000556628 SMG8Q8ND04 991 aaKnown RBP8.5□□□□□ -1.05
HNRNPC-226ENST00000556628 VN1R2Q8NFZ6 395 aa8.5□□□□□ -1.05
HNRNPC-226ENST00000556628 DEPTORQ8TB45 409 aa8.5□□□□□ -1.05
HNRNPC-226ENST00000556628 SNX29Q8TEQ0 813 aa8.5□□□□□ -1.05
HNRNPC-226ENST00000556628 AUTS2Q8WXX7 1259 aa8.5□□□□□ -1.05
HNRNPC-226ENST00000556628 PRIMPOLQ96LW4 560 aa8.5□□□□□ -1.05
HNRNPC-226ENST00000556628 RIPOR3Q96MK2 946 aa8.5□□□□□ -1.05
HNRNPC-226ENST00000556628 NECTIN4Q96NY8 510 aa8.5□□□□□ -1.05
HNRNPC-226ENST00000556628 KIF2CQ99661 725 aa8.5□□□□□ -1.05
HNRNPC-226ENST00000556628 ADPGKQ9BRR6 497 aa8.5□□□□□ -1.05
HNRNPC-226ENST00000556628 COLEC11Q9BWP8 271 aa8.5□□□□□ -1.05
HNRNPC-226ENST00000556628 APOL5Q9BWW9 433 aa8.5□□□□□ -1.05
HNRNPC-226ENST00000556628 GPRC5CQ9NQ84 441 aa8.5□□□□□ -1.05
HNRNPC-226ENST00000556628 MRPL17Q9NRX2 175 aaKnown RBP8.5□□□□□ -1.05
HNRNPC-226ENST00000556628 PARP2Q9UGN5 583 aa8.5□□□□□ -1.05
HNRNPC-226ENST00000556628 NR2E1Q9Y466 385 aa8.5□□□□□ -1.05
HNRNPC-226ENST00000556628 IRAK3Q9Y616 596 aa8.5□□□□□ -1.05
HNRNPC-226ENST00000556628 TTC28Q96AY4 2481 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms