RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 LIG4P49917 911 aa16.64■□□□□ 0.25
ACTN1-217ENST00000556203 NOLC1Q14978 699 aaKnown RBP eCLIP16.64■□□□□ 0.25
ACTN1-217ENST00000556203 TMC7Q7Z402 723 aa16.64■□□□□ 0.25
ACTN1-217ENST00000556203 DDX53Q86TM3 631 aaKnown RBP16.64■□□□□ 0.25
ACTN1-217ENST00000556203 RBM23Q86U06 439 aaKnown RBP16.64■□□□□ 0.25
ACTN1-217ENST00000556203 VPS52Q8N1B4 723 aa16.64■□□□□ 0.25
ACTN1-217ENST00000556203 PABPC5Q96DU9 382 aaKnown RBP16.64■□□□□ 0.25
ACTN1-217ENST00000556203 ASB2Q96Q27 587 aa16.64■□□□□ 0.25
ACTN1-217ENST00000556203 NGRNQ9NPE2 291 aaKnown RBP16.64■□□□□ 0.25
ACTN1-217ENST00000556203 KBTBD4Q9NVX7 518 aa16.64■□□□□ 0.25
ACTN1-217ENST00000556203 MARCH5Q9NX47 278 aa16.64■□□□□ 0.25
ACTN1-217ENST00000556203 CLDND1Q9NY35 253 aa16.64■□□□□ 0.25
ACTN1-217ENST00000556203 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.63■□□□□ 0.25
ACTN1-217ENST00000556203 PTGESO14684 152 aa16.63■□□□□ 0.25
ACTN1-217ENST00000556203 HNRNPDLO14979 420 aaKnown RBP16.63■□□□□ 0.25
ACTN1-217ENST00000556203 PER2O15055 1255 aa16.63■□□□□ 0.25
ACTN1-217ENST00000556203 NCK2O43639 380 aa16.63■□□□□ 0.25
ACTN1-217ENST00000556203 NR1I2O75469 434 aa16.63■□□□□ 0.25
ACTN1-217ENST00000556203 KCNA5P22460 613 aa16.63■□□□□ 0.25
ACTN1-217ENST00000556203 ABCD1P33897 745 aa16.63■□□□□ 0.25
ACTN1-217ENST00000556203 MATR3P43243 847 aaKnown RBP eCLIP16.63■□□□□ 0.25
ACTN1-217ENST00000556203 NRIP1P48552 1158 aa16.63■□□□□ 0.25
ACTN1-217ENST00000556203 YARSP54577 528 aaKnown RBP16.63■□□□□ 0.25
ACTN1-217ENST00000556203 NUCB2P80303 420 aa16.63■□□□□ 0.25
ACTN1-217ENST00000556203 GTF2BQ00403 316 aa16.63■□□□□ 0.25
ACTN1-217ENST00000556203 COL19A1Q14993 1142 aa16.63■□□□□ 0.25
ACTN1-217ENST00000556203 AAK1Q2M2I8 961 aa16.63■□□□□ 0.25
ACTN1-217ENST00000556203 ZC2HC1CQ53FD0 456 aaPredicted RBP16.63■□□□□ 0.25
ACTN1-217ENST00000556203 HERC4Q5GLZ8 1057 aaPredicted RBP16.63■□□□□ 0.25
ACTN1-217ENST00000556203 ZNF720Q7Z2F6 126 aa16.63■□□□□ 0.25
ACTN1-217ENST00000556203 LRRC27Q9C0I9 530 aa16.63■□□□□ 0.25
ACTN1-217ENST00000556203 SCAND2PQ9GZW5 306 aaPredicted RBP16.63■□□□□ 0.25
ACTN1-217ENST00000556203 ST6GALNAC4Q9H4F1 302 aa16.63■□□□□ 0.25
ACTN1-217ENST00000556203 TLE6Q9H808 572 aa16.63■□□□□ 0.25
ACTN1-217ENST00000556203 MRPL44Q9H9J2 332 aaKnown RBP16.63■□□□□ 0.25
ACTN1-217ENST00000556203 PANK4Q9NVE7 773 aa16.63■□□□□ 0.25
ACTN1-217ENST00000556203 TBC1D7Q9P0N9 293 aa16.63■□□□□ 0.25
ACTN1-217ENST00000556203 SEL1LQ9UBV2 794 aa16.63■□□□□ 0.25
ACTN1-217ENST00000556203 KCNH3Q9ULD8 1083 aa16.63■□□□□ 0.25
ACTN1-217ENST00000556203 FRMD3A2A2Y4 597 aa16.62■□□□□ 0.25
ACTN1-217ENST00000556203 HIDE1A8MVS5 230 aa16.62■□□□□ 0.25
ACTN1-217ENST00000556203 F8W810 466 aa16.62■□□□□ 0.25
ACTN1-217ENST00000556203 CLDN3O15551 220 aa16.62■□□□□ 0.25
ACTN1-217ENST00000556203 PIGRP01833 764 aa16.62■□□□□ 0.25
ACTN1-217ENST00000556203 THP07101 528 aa16.62■□□□□ 0.25
ACTN1-217ENST00000556203 CA8P35219 290 aa16.62■□□□□ 0.25
ACTN1-217ENST00000556203 AMPD3Q01432 767 aa16.62■□□□□ 0.25
ACTN1-217ENST00000556203 MCL1Q07820 350 aa16.62■□□□□ 0.25
ACTN1-217ENST00000556203 TUSC3Q13454 348 aa16.62■□□□□ 0.25
ACTN1-217ENST00000556203 SMC1AQ14683 1233 aaKnown RBP16.62■□□□□ 0.25
ACTN1-217ENST00000556203 BMS1Q14692 1282 aaKnown RBP16.62■□□□□ 0.25
ACTN1-217ENST00000556203 TJAP1Q5JTD0 557 aa16.62■□□□□ 0.25
ACTN1-217ENST00000556203 GLRA4Q5JXX5 417 aa16.62■□□□□ 0.25
ACTN1-217ENST00000556203 ADALQ6DHV7 355 aa16.62■□□□□ 0.25
ACTN1-217ENST00000556203 MAP4K3Q8IVH8 894 aa16.62■□□□□ 0.25
ACTN1-217ENST00000556203 RABGGTAQ92696 567 aa16.62■□□□□ 0.25
ACTN1-217ENST00000556203 ACAP3Q96P50 834 aa16.62■□□□□ 0.25
ACTN1-217ENST00000556203 COLEC11Q9BWP8 271 aa16.62■□□□□ 0.25
ACTN1-217ENST00000556203 VN1R3Q9BXE9 311 aa16.62■□□□□ 0.25
ACTN1-217ENST00000556203 HAPLN2Q9GZV7 340 aa16.62■□□□□ 0.25
ACTN1-217ENST00000556203 ZBP1Q9H171 429 aa16.62■□□□□ 0.25
ACTN1-217ENST00000556203 MAGEF1Q9HAY2 307 aa16.62■□□□□ 0.25
ACTN1-217ENST00000556203 TOPORSQ9NS56 1045 aaPredicted RBP16.62■□□□□ 0.25
ACTN1-217ENST00000556203 CACNG4Q9UBN1 327 aa16.62■□□□□ 0.25
ACTN1-217ENST00000556203 PLXNA4Q9HCM2 1894 aa16.61■□□□□ 0.25
ACTN1-217ENST00000556203 PRUNE2Q8WUY3 3088 aa16.61■□□□□ 0.25
ACTN1-217ENST00000556203 C2orf71A6NGG8 1288 aa16.61■□□□□ 0.25
ACTN1-217ENST00000556203 CASTOR2A6NHX0 329 aa16.61■□□□□ 0.25
ACTN1-217ENST00000556203 H3BQ06 376 aaPredicted RBP16.61■□□□□ 0.25
ACTN1-217ENST00000556203 LINC01565O15544 149 aa16.61■□□□□ 0.25
ACTN1-217ENST00000556203 CTSAP10619 480 aa16.61■□□□□ 0.25
ACTN1-217ENST00000556203 CMA1P23946 247 aa16.61■□□□□ 0.25
ACTN1-217ENST00000556203 KCNQ1P51787 676 aa16.61■□□□□ 0.25
ACTN1-217ENST00000556203 DUSP6Q16828 381 aa16.61■□□□□ 0.25
ACTN1-217ENST00000556203 CTC1Q2NKJ3 1217 aa16.61■□□□□ 0.25
ACTN1-217ENST00000556203 SEZ6Q53EL9 994 aa16.61■□□□□ 0.25
ACTN1-217ENST00000556203 CCDC65Q8IXS2 484 aa16.61■□□□□ 0.25
ACTN1-217ENST00000556203 EFHBQ8N7U6 833 aa16.61■□□□□ 0.25
ACTN1-217ENST00000556203 MRPL43Q8N983 215 aaKnown RBP16.61■□□□□ 0.25
ACTN1-217ENST00000556203 AUTS2Q8WXX7 1259 aa16.61■□□□□ 0.25
ACTN1-217ENST00000556203 SNX27Q96L92 541 aa16.61■□□□□ 0.25
ACTN1-217ENST00000556203 CDCA3Q99618 268 aaPredicted RBP16.61■□□□□ 0.25
ACTN1-217ENST00000556203 PYM1Q9BRP8 204 aaKnown RBP16.61■□□□□ 0.25
ACTN1-217ENST00000556203 TRIM9Q9C026 710 aa16.61■□□□□ 0.25
ACTN1-217ENST00000556203 STK39Q9UEW8 545 aa16.61■□□□□ 0.25
ACTN1-217ENST00000556203 SMIM28A0A1B0GU29 152 aa16.6■□□□□ 0.25
ACTN1-217ENST00000556203 A0A1B0GVL5 298 aa16.6■□□□□ 0.25
ACTN1-217ENST00000556203 PPP1R37O75864 691 aa16.6■□□□□ 0.25
ACTN1-217ENST00000556203 GCNT3O95395 438 aa16.6■□□□□ 0.25
ACTN1-217ENST00000556203 CXCL14O95715 111 aa16.6■□□□□ 0.25
ACTN1-217ENST00000556203 MYBP10242 640 aa16.6■□□□□ 0.25
ACTN1-217ENST00000556203 PFKFB1P16118 471 aa16.6■□□□□ 0.25
ACTN1-217ENST00000556203 CASP5P51878 434 aa16.6■□□□□ 0.25
ACTN1-217ENST00000556203 ASIC1P78348 528 aa16.6■□□□□ 0.25
ACTN1-217ENST00000556203 COASYQ13057 564 aa16.6■□□□□ 0.25
ACTN1-217ENST00000556203 ADAM15Q13444 863 aa16.6■□□□□ 0.25
ACTN1-217ENST00000556203 NAB2Q15742 525 aa16.6■□□□□ 0.25
ACTN1-217ENST00000556203 LEXMQ3ZCV2 418 aa16.6■□□□□ 0.25
ACTN1-217ENST00000556203 TPRNQ4KMQ1 711 aa16.6■□□□□ 0.25
ACTN1-217ENST00000556203 XKR4Q5GH76 650 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms