RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 GALR2O43603 387 aaPredicted RBP8.59□□□□□ -1.03
PTCSC3-201ENST00000556013 SEC24BO95487 1268 aa8.59□□□□□ -1.03
PTCSC3-201ENST00000556013 NPTXRO95502 500 aa8.59□□□□□ -1.03
PTCSC3-201ENST00000556013 BRD1O95696 1058 aa8.59□□□□□ -1.03
PTCSC3-201ENST00000556013 POU2F2P09086 479 aa8.59□□□□□ -1.03
PTCSC3-201ENST00000556013 AKAP5P24588 427 aa8.59□□□□□ -1.03
PTCSC3-201ENST00000556013 HOXA9P31269 272 aa8.59□□□□□ -1.03
PTCSC3-201ENST00000556013 HSP90AA2PQ14568 343 aaPredicted RBP8.59□□□□□ -1.03
PTCSC3-201ENST00000556013 TTC38Q5R3I4 469 aa8.59□□□□□ -1.03
PTCSC3-201ENST00000556013 CCDC83Q8IWF9 413 aa8.59□□□□□ -1.03
PTCSC3-201ENST00000556013 DEPTORQ8TB45 409 aa8.59□□□□□ -1.03
PTCSC3-201ENST00000556013 PIK3R5Q8WYR1 880 aa8.59□□□□□ -1.03
PTCSC3-201ENST00000556013 RTP3Q9BQQ7 232 aa8.59□□□□□ -1.03
PTCSC3-201ENST00000556013 NTPCRQ9BSD7 190 aaKnown RBP8.59□□□□□ -1.03
PTCSC3-201ENST00000556013 TIPINQ9BVW5 301 aa8.59□□□□□ -1.03
PTCSC3-201ENST00000556013 GPR62Q9BZJ7 368 aa8.59□□□□□ -1.03
PTCSC3-201ENST00000556013 PRKD2Q9BZL6 878 aa8.59□□□□□ -1.03
PTCSC3-201ENST00000556013 CCDC113Q9H0I3 377 aa8.59□□□□□ -1.03
PTCSC3-201ENST00000556013 NT5C3AQ9H0P0 336 aa8.59□□□□□ -1.03
PTCSC3-201ENST00000556013 NXF3Q9H4D5 531 aaKnown RBP8.59□□□□□ -1.03
PTCSC3-201ENST00000556013 KCNK12Q9HB15 430 aa8.59□□□□□ -1.03
PTCSC3-201ENST00000556013 GPRC5CQ9NQ84 441 aa8.59□□□□□ -1.03
PTCSC3-201ENST00000556013 MAN1C1Q9NR34 630 aa8.59□□□□□ -1.03
PTCSC3-201ENST00000556013 EPS15L1Q9UBC2 864 aa8.59□□□□□ -1.03
PTCSC3-201ENST00000556013 LRWD1Q9UFC0 647 aa8.59□□□□□ -1.03
PTCSC3-201ENST00000556013 DUSP12Q9UNI6 340 aa8.59□□□□□ -1.03
PTCSC3-201ENST00000556013 DNM3Q9UQ16 869 aa8.59□□□□□ -1.03
PTCSC3-201ENST00000556013 K7ERI5 159 aa8.58□□□□□ -1.04
PTCSC3-201ENST00000556013 SLC26A4O43511 780 aa8.58□□□□□ -1.04
PTCSC3-201ENST00000556013 TGM5O43548 720 aa8.58□□□□□ -1.04
PTCSC3-201ENST00000556013 TRAPPC3O43617 180 aa8.58□□□□□ -1.04
PTCSC3-201ENST00000556013 DTNBO60941 627 aa8.58□□□□□ -1.04
PTCSC3-201ENST00000556013 ZMYND10O75800 440 aa8.58□□□□□ -1.04
PTCSC3-201ENST00000556013 SSBP05455 408 aaKnown RBP eCLIP8.58□□□□□ -1.04
PTCSC3-201ENST00000556013 PRKCBP05771 671 aa8.58□□□□□ -1.04
PTCSC3-201ENST00000556013 HNRNPA1P09651 372 aaKnown RBP eCLIP8.58□□□□□ -1.04
PTCSC3-201ENST00000556013 CCT6AP40227 531 aaKnown RBP8.58□□□□□ -1.04
PTCSC3-201ENST00000556013 GNL2Q13823 731 aaKnown RBP8.58□□□□□ -1.04
PTCSC3-201ENST00000556013 NAB2Q15742 525 aa8.58□□□□□ -1.04
PTCSC3-201ENST00000556013 RILPL1Q5EBL4 403 aa8.58□□□□□ -1.04
PTCSC3-201ENST00000556013 XKR4Q5GH76 650 aa8.58□□□□□ -1.04
PTCSC3-201ENST00000556013 KRT79Q5XKE5 535 aa8.58□□□□□ -1.04
PTCSC3-201ENST00000556013 ASTLQ6HA08 431 aaPredicted RBP8.58□□□□□ -1.04
PTCSC3-201ENST00000556013 KANK3Q6NY19 840 aa8.58□□□□□ -1.04
PTCSC3-201ENST00000556013 DCLRE1AQ6PJP8 1040 aa8.58□□□□□ -1.04
PTCSC3-201ENST00000556013 MAEAQ7L5Y9 396 aa8.58□□□□□ -1.04
PTCSC3-201ENST00000556013 LNX1Q8TBB1 728 aaPredicted RBP8.58□□□□□ -1.04
PTCSC3-201ENST00000556013 KCNN1Q92952 543 aa8.58□□□□□ -1.04
PTCSC3-201ENST00000556013 DDX27Q96GQ7 796 aaKnown RBP8.58□□□□□ -1.04
PTCSC3-201ENST00000556013 UROC1Q96N76 676 aa8.58□□□□□ -1.04
PTCSC3-201ENST00000556013 KIF2CQ99661 725 aa8.58□□□□□ -1.04
PTCSC3-201ENST00000556013 TTPALQ9BTX7 342 aa8.58□□□□□ -1.04
PTCSC3-201ENST00000556013 BHMT2Q9H2M3 363 aa8.58□□□□□ -1.04
PTCSC3-201ENST00000556013 PDZD7Q9H5P4 517 aa8.58□□□□□ -1.04
PTCSC3-201ENST00000556013 SNTG2Q9NY99 539 aa8.58□□□□□ -1.04
PTCSC3-201ENST00000556013 CDH22Q9UJ99 828 aa8.58□□□□□ -1.04
PTCSC3-201ENST00000556013 KIAA1024Q9UPX6 916 aa8.58□□□□□ -1.04
PTCSC3-201ENST00000556013 TNFSF13BQ9Y275 285 aa8.58□□□□□ -1.04
PTCSC3-201ENST00000556013 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.58□□□□□ -1.04
PTCSC3-201ENST00000556013 WDFY4Q6ZS81 3184 aa8.58□□□□□ -1.04
PTCSC3-201ENST00000556013 A0A087WWV3 80 aa8.57□□□□□ -1.04
PTCSC3-201ENST00000556013 C2CD2LO14523 706 aa8.57□□□□□ -1.04
PTCSC3-201ENST00000556013 PTGESO14684 152 aa8.57□□□□□ -1.04
PTCSC3-201ENST00000556013 ST18O60284 1047 aa8.57□□□□□ -1.04
PTCSC3-201ENST00000556013 ASGR2P07307 311 aa8.57□□□□□ -1.04
PTCSC3-201ENST00000556013 WEE2P0C1S8 567 aa8.57□□□□□ -1.04
PTCSC3-201ENST00000556013 LAMP2P13473 410 aa8.57□□□□□ -1.04
PTCSC3-201ENST00000556013 SCP2P22307 547 aa8.57□□□□□ -1.04
PTCSC3-201ENST00000556013 TOB1P50616 345 aaPredicted RBP8.57□□□□□ -1.04
PTCSC3-201ENST00000556013 VCPP55072 806 aaKnown RBP8.57□□□□□ -1.04
PTCSC3-201ENST00000556013 GUCY1B3Q02153 619 aa8.57□□□□□ -1.04
PTCSC3-201ENST00000556013 PTGDRQ13258 359 aa8.57□□□□□ -1.04
PTCSC3-201ENST00000556013 RAB33AQ14088 237 aa8.57□□□□□ -1.04
PTCSC3-201ENST00000556013 HYIQ5T013 277 aa8.57□□□□□ -1.04
PTCSC3-201ENST00000556013 ATF7IP2Q5U623 682 aa8.57□□□□□ -1.04
PTCSC3-201ENST00000556013 POTEGQ6S5H5 508 aa8.57□□□□□ -1.04
PTCSC3-201ENST00000556013 ALKAL1Q6UXT8 129 aa8.57□□□□□ -1.04
PTCSC3-201ENST00000556013 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.57□□□□□ -1.04
PTCSC3-201ENST00000556013 DTHD1Q6ZMT9 781 aa8.57□□□□□ -1.04
PTCSC3-201ENST00000556013 RIN2Q8WYP3 895 aaPredicted RBP8.57□□□□□ -1.04
PTCSC3-201ENST00000556013 BSNDQ8WZ55 320 aa8.57□□□□□ -1.04
PTCSC3-201ENST00000556013 SMG7Q92540 1137 aaKnown RBP8.57□□□□□ -1.04
PTCSC3-201ENST00000556013 ZNF707Q96C28 371 aaPredicted RBP8.57□□□□□ -1.04
PTCSC3-201ENST00000556013 BORCS6Q96GS4 357 aa8.57□□□□□ -1.04
PTCSC3-201ENST00000556013 APOL6Q9BWW8 343 aa8.57□□□□□ -1.04
PTCSC3-201ENST00000556013 PIDD1Q9HB75 910 aa8.57□□□□□ -1.04
PTCSC3-201ENST00000556013 PTPRHQ9HD43 1115 aa8.57□□□□□ -1.04
PTCSC3-201ENST00000556013 TOPORSQ9NS56 1045 aaPredicted RBP8.57□□□□□ -1.04
PTCSC3-201ENST00000556013 SLC38A7Q9NVC3 462 aa8.57□□□□□ -1.04
PTCSC3-201ENST00000556013 KCND2Q9NZV8 630 aa8.57□□□□□ -1.04
PTCSC3-201ENST00000556013 KLK14Q9P0G3 267 aa8.57□□□□□ -1.04
PTCSC3-201ENST00000556013 BACE2Q9Y5Z0 518 aa8.57□□□□□ -1.04
PTCSC3-201ENST00000556013 PTPRZ1P23471 2315 aaPredicted RBP8.57□□□□□ -1.04
PTCSC3-201ENST00000556013 CLUHO75153 1309 aa8.56□□□□□ -1.04
PTCSC3-201ENST00000556013 RECQL4O94761 1208 aa8.56□□□□□ -1.04
PTCSC3-201ENST00000556013 SRFP11831 508 aa8.56□□□□□ -1.04
PTCSC3-201ENST00000556013 AOC1P19801 751 aa8.56□□□□□ -1.04
PTCSC3-201ENST00000556013 FGFR3P22607 806 aa8.56□□□□□ -1.04
PTCSC3-201ENST00000556013 SP100P23497 879 aaPredicted RBP8.56□□□□□ -1.04
PTCSC3-201ENST00000556013 GUCY2CP25092 1073 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms