RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 GPR149Q86SP6 731 aa16.99■□□□□ 0.31
SNX6-205ENST00000555648 KREMEN2Q8NCW0 462 aa16.99■□□□□ 0.31
SNX6-205ENST00000555648 GSTCDQ8NEC7 633 aa16.99■□□□□ 0.31
SNX6-205ENST00000555648 RIN2Q8WYP3 895 aaPredicted RBP16.99■□□□□ 0.31
SNX6-205ENST00000555648 RABGGTAQ92696 567 aa16.99■□□□□ 0.31
SNX6-205ENST00000555648 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.99■□□□□ 0.31
SNX6-205ENST00000555648 SORCS3Q9UPU3 1222 aa16.99■□□□□ 0.31
SNX6-205ENST00000555648 USTQ9Y2C2 406 aa16.99■□□□□ 0.31
SNX6-205ENST00000555648 GDAQ9Y2T3 454 aa16.99■□□□□ 0.31
SNX6-205ENST00000555648 CASTOR2A6NHX0 329 aa16.98■□□□□ 0.31
SNX6-205ENST00000555648 PP2D1A8MPX8 630 aa16.98■□□□□ 0.31
SNX6-205ENST00000555648 E9PMD0 336 aa16.98■□□□□ 0.31
SNX6-205ENST00000555648 YARSP54577 528 aaKnown RBP16.98■□□□□ 0.31
SNX6-205ENST00000555648 PEX3P56589 373 aa16.98■□□□□ 0.31
SNX6-205ENST00000555648 KIAA0319Q5VV43 1072 aa16.98■□□□□ 0.31
SNX6-205ENST00000555648 C15orf39Q6ZRI6 1047 aa16.98■□□□□ 0.31
SNX6-205ENST00000555648 UBALD2Q8IYN6 164 aa16.98■□□□□ 0.31
SNX6-205ENST00000555648 ZDHHC14Q8IZN3 488 aa16.98■□□□□ 0.31
SNX6-205ENST00000555648 GPR62Q9BZJ7 368 aa16.98■□□□□ 0.31
SNX6-205ENST00000555648 CCDC113Q9H0I3 377 aa16.98■□□□□ 0.31
SNX6-205ENST00000555648 PIDD1Q9HB75 910 aa16.98■□□□□ 0.31
SNX6-205ENST00000555648 RXFP1Q9HBX9 757 aa16.98■□□□□ 0.31
SNX6-205ENST00000555648 KMT5AQ9NQR1 393 aa16.98■□□□□ 0.31
SNX6-205ENST00000555648 LIMD1Q9UGP4 676 aa16.98■□□□□ 0.31
SNX6-205ENST00000555648 KCNG1Q9UIX4 513 aa16.98■□□□□ 0.31
SNX6-205ENST00000555648 USP20Q9Y2K6 914 aa16.98■□□□□ 0.31
SNX6-205ENST00000555648 TTLL13PA6NNM8 815 aa16.97■□□□□ 0.31
SNX6-205ENST00000555648 F8W810 466 aa16.97■□□□□ 0.31
SNX6-205ENST00000555648 HIP1RO75146 1068 aa16.97■□□□□ 0.31
SNX6-205ENST00000555648 MYBP10242 640 aa16.97■□□□□ 0.31
SNX6-205ENST00000555648 CDC25AP30304 524 aa16.97■□□□□ 0.31
SNX6-205ENST00000555648 ELAVL2Q12926 359 aaKnown RBP16.97■□□□□ 0.31
SNX6-205ENST00000555648 CEP57Q86XR8 500 aa16.97■□□□□ 0.31
SNX6-205ENST00000555648 PALB2Q86YC2 1186 aa16.97■□□□□ 0.31
SNX6-205ENST00000555648 GLYCTKQ8IVS8 523 aa16.97■□□□□ 0.31
SNX6-205ENST00000555648 GPR65Q8IYL9 337 aa16.97■□□□□ 0.31
SNX6-205ENST00000555648 RNF168Q8IYW5 571 aaPredicted RBP16.97■□□□□ 0.31
SNX6-205ENST00000555648 FBXL6Q8N531 539 aa16.97■□□□□ 0.31
SNX6-205ENST00000555648 STAMQ92783 540 aa16.97■□□□□ 0.31
SNX6-205ENST00000555648 B3GALT6Q96L58 329 aa16.97■□□□□ 0.31
SNX6-205ENST00000555648 TCHPQ9BT92 498 aa16.97■□□□□ 0.31
SNX6-205ENST00000555648 TIPINQ9BVW5 301 aa16.97■□□□□ 0.31
SNX6-205ENST00000555648 CCDC94Q9BW85 323 aaPredicted RBP16.97■□□□□ 0.31
SNX6-205ENST00000555648 MRPL4Q9BYD3 311 aaKnown RBP16.97■□□□□ 0.31
SNX6-205ENST00000555648 NT5C3AQ9H0P0 336 aa16.97■□□□□ 0.31
SNX6-205ENST00000555648 CHST7Q9NS84 486 aa16.97■□□□□ 0.31
SNX6-205ENST00000555648 RBM19Q9Y4C8 960 aaKnown RBP16.97■□□□□ 0.31
SNX6-205ENST00000555648 ARID2Q68CP9 1835 aa16.96■□□□□ 0.31
SNX6-205ENST00000555648 CCDC195A0A1B0GUA6 201 aa16.96■□□□□ 0.31
SNX6-205ENST00000555648 VWA3AA6NCI4 1184 aa16.96■□□□□ 0.31
SNX6-205ENST00000555648 NPTX2P47972 431 aa16.96■□□□□ 0.31
SNX6-205ENST00000555648 ATP2C1P98194 919 aaPredicted RBP16.96■□□□□ 0.31
SNX6-205ENST00000555648 ZNF568Q3ZCX4 644 aa16.96■□□□□ 0.31
SNX6-205ENST00000555648 EEF1DP3Q658K8 133 aa16.96■□□□□ 0.31
SNX6-205ENST00000555648 LARP1BQ659C4 914 aaKnown RBP16.96■□□□□ 0.31
SNX6-205ENST00000555648 CYP26C1Q6V0L0 522 aa16.96■□□□□ 0.31
SNX6-205ENST00000555648 CMASQ8NFW8 434 aaPredicted RBP16.96■□□□□ 0.31
SNX6-205ENST00000555648 HASPINQ8TF76 798 aa16.96■□□□□ 0.31
SNX6-205ENST00000555648 PRRX2Q99811 253 aa16.96■□□□□ 0.31
SNX6-205ENST00000555648 TTPALQ9BTX7 342 aa16.96■□□□□ 0.31
SNX6-205ENST00000555648 PLEKHA4Q9H4M7 779 aa16.96■□□□□ 0.31
SNX6-205ENST00000555648 C17orf75Q9HAS0 396 aa16.96■□□□□ 0.31
SNX6-205ENST00000555648 TOPORSQ9NS56 1045 aaPredicted RBP16.96■□□□□ 0.31
SNX6-205ENST00000555648 FNIP2Q9P278 1114 aa16.96■□□□□ 0.31
SNX6-205ENST00000555648 TNFSF13BQ9Y275 285 aa16.96■□□□□ 0.31
SNX6-205ENST00000555648 SPATA31D3P0C874 917 aa16.95■□□□□ 0.3
SNX6-205ENST00000555648 SMTNP53814 917 aa16.95■□□□□ 0.3
SNX6-205ENST00000555648 STRN3Q13033 797 aa16.95■□□□□ 0.3
SNX6-205ENST00000555648 IL17AQ16552 155 aa16.95■□□□□ 0.3
SNX6-205ENST00000555648 NT5DC1Q5TFE4 455 aa16.95■□□□□ 0.3
SNX6-205ENST00000555648 FAM171A1Q5VUB5 890 aa16.95■□□□□ 0.3
SNX6-205ENST00000555648 RINT1Q6NUQ1 792 aa16.95■□□□□ 0.3
SNX6-205ENST00000555648 PDXDC1Q6P996 788 aa16.95■□□□□ 0.3
SNX6-205ENST00000555648 SPATA31D4Q6ZUB0 917 aa16.95■□□□□ 0.3
SNX6-205ENST00000555648 KCTD17Q8N5Z5 321 aa16.95■□□□□ 0.3
SNX6-205ENST00000555648 RASSF8Q8NHQ8 419 aa16.95■□□□□ 0.3
SNX6-205ENST00000555648 HDAC7Q8WUI4 952 aa16.95■□□□□ 0.3
SNX6-205ENST00000555648 SMG7Q92540 1137 aaKnown RBP16.95■□□□□ 0.3
SNX6-205ENST00000555648 PLIN2Q99541 437 aa16.95■□□□□ 0.3
SNX6-205ENST00000555648 RUSC1Q9BVN2 902 aa16.95■□□□□ 0.3
SNX6-205ENST00000555648 TMEM134Q9H6X4 195 aa16.95■□□□□ 0.3
SNX6-205ENST00000555648 CACNG4Q9UBN1 327 aa16.95■□□□□ 0.3
SNX6-205ENST00000555648 PTGESO14684 152 aa16.94■□□□□ 0.3
SNX6-205ENST00000555648 B3GAT3O94766 335 aa16.94■□□□□ 0.3
SNX6-205ENST00000555648 KIF4AO95239 1232 aa16.94■□□□□ 0.3
SNX6-205ENST00000555648 C1RP00736 705 aa16.94■□□□□ 0.3
SNX6-205ENST00000555648 ASGR2P07307 311 aa16.94■□□□□ 0.3
SNX6-205ENST00000555648 GBP2P32456 591 aaPredicted RBP16.94■□□□□ 0.3
SNX6-205ENST00000555648 ARL6IP4Q66PJ3 421 aaKnown RBP16.94■□□□□ 0.3
SNX6-205ENST00000555648 PAAF1Q9BRP4 392 aa16.94■□□□□ 0.3
SNX6-205ENST00000555648 SLC16A4O15374 487 aa16.93■□□□□ 0.3
SNX6-205ENST00000555648 TGM5O43548 720 aa16.93■□□□□ 0.3
SNX6-205ENST00000555648 TRAPPC3O43617 180 aa16.93■□□□□ 0.3
SNX6-205ENST00000555648 CD2BP2O95400 341 aaKnown RBP16.93■□□□□ 0.3
SNX6-205ENST00000555648 EFEMP2O95967 443 aa16.93■□□□□ 0.3
SNX6-205ENST00000555648 BMP15O95972 392 aa16.93■□□□□ 0.3
SNX6-205ENST00000555648 EDN1P05305 212 aa16.93■□□□□ 0.3
SNX6-205ENST00000555648 RPL17P18621 184 aaKnown RBP16.93■□□□□ 0.3
SNX6-205ENST00000555648 GUCY2CP25092 1073 aa16.93■□□□□ 0.3
SNX6-205ENST00000555648 UBA7P41226 1012 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms