RNA–Protein interactions for RNA: ENST00000555573.5

KTN1-223, Transcript of kinectin 1, human

TSL 2 BASIC

Gene KTN1, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-223	ENST00000555573	COL23A1	Q86Y22	540 aa	Predicted RBP	5.93	□□□□□ -1.46
KTN1-223	ENST00000555573	KIAA0319L	Q8IZA0	1049 aa		5.93	□□□□□ -1.46
KTN1-223	ENST00000555573	PJA1	Q8NG27	643 aa		5.93	□□□□□ -1.46
KTN1-223	ENST00000555573	PLBD2	Q8NHP8	589 aa		5.93	□□□□□ -1.46
KTN1-223	ENST00000555573	KLHDC4	Q8TBB5	520 aa		5.93	□□□□□ -1.46
KTN1-223	ENST00000555573	IFI44	Q8TCB0	444 aa		5.93	□□□□□ -1.46
KTN1-223	ENST00000555573	STON2	Q8WXE9	905 aa		5.93	□□□□□ -1.46
KTN1-223	ENST00000555573	CYFIP2	Q96F07	1278 aa		5.93	□□□□□ -1.46
KTN1-223	ENST00000555573	FMNL2	Q96PY5	1086 aa		5.93	□□□□□ -1.46
KTN1-223	ENST00000555573	VRK1	Q99986	396 aa	Predicted RBP	5.93	□□□□□ -1.46
KTN1-223	ENST00000555573	SENP6	Q9GZR1	1112 aa	Predicted RBP	5.93	□□□□□ -1.46
KTN1-223	ENST00000555573	NCDN	Q9UBB6	729 aa		5.93	□□□□□ -1.46
KTN1-223	ENST00000555573	SLC16A6	O15403	523 aa		5.92	□□□□□ -1.46
KTN1-223	ENST00000555573	FPR1	P21462	350 aa		5.92	□□□□□ -1.46
KTN1-223	ENST00000555573	PCSK1	P29120	753 aa		5.92	□□□□□ -1.46
KTN1-223	ENST00000555573	PTPN7	P35236	360 aa		5.92	□□□□□ -1.46
KTN1-223	ENST00000555573	KCNC1	P48547	511 aa		5.92	□□□□□ -1.46
KTN1-223	ENST00000555573	AGFG1	P52594	562 aa	Known RBP	5.92	□□□□□ -1.46
KTN1-223	ENST00000555573	HK3	P52790	923 aa		5.92	□□□□□ -1.46
KTN1-223	ENST00000555573	RHBDL3	P58872	404 aa		5.92	□□□□□ -1.46
KTN1-223	ENST00000555573	ATP8B2	P98198	1209 aa		5.92	□□□□□ -1.46
KTN1-223	ENST00000555573	KIAA2012	Q0VF49	1180 aa		5.92	□□□□□ -1.46
KTN1-223	ENST00000555573	KHDC1	Q4VXA5	237 aa	Known RBP	5.92	□□□□□ -1.46
KTN1-223	ENST00000555573	CCDC157	Q569K6	752 aa		5.92	□□□□□ -1.46
KTN1-223	ENST00000555573	CCDC149	Q6ZUS6	474 aa		5.92	□□□□□ -1.46
KTN1-223	ENST00000555573	FAM124A	Q86V42	546 aa		5.92	□□□□□ -1.46
KTN1-223	ENST00000555573	FAM43A	Q8N2R8	423 aa		5.92	□□□□□ -1.46
KTN1-223	ENST00000555573	C3orf20	Q8ND61	904 aa		5.92	□□□□□ -1.46
KTN1-223	ENST00000555573	OR5M3	Q8NGP4	307 aa		5.92	□□□□□ -1.46
KTN1-223	ENST00000555573	PCDHA3	Q9Y5H8	950 aa		5.92	□□□□□ -1.46
KTN1-223	ENST00000555573	ZMYM3	Q14202	1370 aa		5.91	□□□□□ -1.46
KTN1-223	ENST00000555573	NRP1	O14786	923 aa		5.91	□□□□□ -1.46
KTN1-223	ENST00000555573	SLC26A4	O43511	780 aa		5.91	□□□□□ -1.46
KTN1-223	ENST00000555573	GPR32	O75388	356 aa		5.91	□□□□□ -1.46
KTN1-223	ENST00000555573	CNOT4	O95628	575 aa	Known RBP	5.91	□□□□□ -1.46
KTN1-223	ENST00000555573	HRG	P04196	525 aa		5.91	□□□□□ -1.46
KTN1-223	ENST00000555573	DDC	P20711	480 aa		5.91	□□□□□ -1.46
KTN1-223	ENST00000555573	IL12RB1	P42701	662 aa		5.91	□□□□□ -1.46
KTN1-223	ENST00000555573	MTM1	Q13496	603 aa		5.91	□□□□□ -1.46
KTN1-223	ENST00000555573	SAFB	Q15424	915 aa	Known RBP eCLIP	5.91	□□□□□ -1.46
KTN1-223	ENST00000555573	ANO6	Q4KMQ2	910 aa		5.91	□□□□□ -1.46
KTN1-223	ENST00000555573	NT5DC1	Q5TFE4	455 aa		5.91	□□□□□ -1.46
KTN1-223	ENST00000555573	SWSAP1	Q6NVH7	229 aa		5.91	□□□□□ -1.46
KTN1-223	ENST00000555573	ADGRE4P	Q86SQ3	457 aa		5.91	□□□□□ -1.46
KTN1-223	ENST00000555573	DAAM2	Q86T65	1068 aa		5.91	□□□□□ -1.46
KTN1-223	ENST00000555573	CMTM4	Q8IZR5	234 aa		5.91	□□□□□ -1.46
KTN1-223	ENST00000555573	RABGGTA	Q92696	567 aa		5.91	□□□□□ -1.46
KTN1-223	ENST00000555573	CDC5L	Q99459	802 aa	Known RBP	5.91	□□□□□ -1.46
KTN1-223	ENST00000555573	ENKD1	Q9H0I2	346 aa		5.91	□□□□□ -1.46
KTN1-223	ENST00000555573	ARMT1	Q9H993	441 aa		5.91	□□□□□ -1.46
KTN1-223	ENST00000555573	PUF60	Q9UHX1	559 aa	Known RBP	5.91	□□□□□ -1.46
KTN1-223	ENST00000555573	L1RE1	Q9UN81	338 aa		5.91	□□□□□ -1.46
KTN1-223	ENST00000555573	POLH	Q9Y253	713 aa		5.91	□□□□□ -1.46
KTN1-223	ENST00000555573	SASH1	O94885	1247 aa		5.91	□□□□□ -1.46
KTN1-223	ENST00000555573	ZNF280A	P59817	542 aa	Predicted RBP	5.91	□□□□□ -1.46
KTN1-223	ENST00000555573	TLE1	Q04724	770 aa		5.91	□□□□□ -1.46
KTN1-223	ENST00000555573	RAB39A	Q14964	217 aa		5.91	□□□□□ -1.46
KTN1-223	ENST00000555573	KIAA0753	Q2KHM9	967 aa		5.91	□□□□□ -1.46
KTN1-223	ENST00000555573	IL31	Q6EBC2	164 aa		5.91	□□□□□ -1.46
KTN1-223	ENST00000555573	HEATR3	Q7Z4Q2	680 aa		5.91	□□□□□ -1.46
KTN1-223	ENST00000555573	SYT8	Q8NBV8	401 aa		5.91	□□□□□ -1.46
KTN1-223	ENST00000555573	CEP95	Q96GE4	821 aa		5.91	□□□□□ -1.46
KTN1-223	ENST00000555573	SLC39A13	Q96H72	371 aa		5.91	□□□□□ -1.46
KTN1-223	ENST00000555573	CDK5RAP3	Q96JB5	506 aa		5.91	□□□□□ -1.46
KTN1-223	ENST00000555573	NT5C1B	Q96P26	610 aa		5.91	□□□□□ -1.46
KTN1-223	ENST00000555573	DPYSL5	Q9BPU6	564 aa		5.91	□□□□□ -1.46
KTN1-223	ENST00000555573	AGO3	Q9H9G7	860 aa	Known RBP	5.91	□□□□□ -1.46
KTN1-223	ENST00000555573	IL23A	Q9NPF7	189 aa		5.91	□□□□□ -1.46
KTN1-223	ENST00000555573	TMEM140	Q9NV12	185 aa		5.91	□□□□□ -1.46
KTN1-223	ENST00000555573	ACTL7A	Q9Y615	435 aa		5.91	□□□□□ -1.46
KTN1-223	ENST00000555573	ATRNL1	Q5VV63	1379 aa		5.9	□□□□□ -1.46
KTN1-223	ENST00000555573	CAPN8	A6NHC0	703 aa		5.9	□□□□□ -1.47
KTN1-223	ENST00000555573	C8A	P07357	584 aa		5.9	□□□□□ -1.47
KTN1-223	ENST00000555573	NBPF7	P0C2Y1	421 aa	Predicted RBP	5.9	□□□□□ -1.47
KTN1-223	ENST00000555573	ALOX15	P16050	662 aa	Predicted RBP	5.9	□□□□□ -1.47
KTN1-223	ENST00000555573	MAL	P21145	153 aa		5.9	□□□□□ -1.47
KTN1-223	ENST00000555573	NEK3	P51956	506 aa		5.9	□□□□□ -1.47
KTN1-223	ENST00000555573	RAC3	P60763	192 aa		5.9	□□□□□ -1.47
KTN1-223	ENST00000555573	RAB1A	P62820	205 aa		5.9	□□□□□ -1.47
KTN1-223	ENST00000555573	SNAPC2	Q13487	334 aa		5.9	□□□□□ -1.47
KTN1-223	ENST00000555573	MFSD14B	Q5SR56	506 aa		5.9	□□□□□ -1.47
KTN1-223	ENST00000555573	BORA	Q6PGQ7	559 aa		5.9	□□□□□ -1.47
KTN1-223	ENST00000555573	GADL1	Q6ZQY3	521 aa		5.9	□□□□□ -1.47
KTN1-223	ENST00000555573	ZNF572	Q7Z3I7	529 aa	Predicted RBP	5.9	□□□□□ -1.47
KTN1-223	ENST00000555573	NEIL1	Q96FI4	390 aa	Predicted RBP	5.9	□□□□□ -1.47
KTN1-223	ENST00000555573	BHMT2	Q9H2M3	363 aa		5.9	□□□□□ -1.47
KTN1-223	ENST00000555573	LMBRD1	Q9NUN5	540 aa		5.9	□□□□□ -1.47
KTN1-223	ENST00000555573	CALCOCO1	Q9P1Z2	691 aa		5.9	□□□□□ -1.47
KTN1-223	ENST00000555573	ABCF2	Q9UG63	623 aa		5.9	□□□□□ -1.47
KTN1-223	ENST00000555573	USP25	Q9UHP3	1055 aa		5.9	□□□□□ -1.47
KTN1-223	ENST00000555573	RUVBL1	Q9Y265	456 aa	Known RBP	5.9	□□□□□ -1.47
KTN1-223	ENST00000555573	PCDHGB6	Q9Y5F9	930 aa		5.9	□□□□□ -1.47
KTN1-223	ENST00000555573	UBE2QL1	A1L167	161 aa		5.89	□□□□□ -1.47
KTN1-223	ENST00000555573	PMM2	O15305	246 aa		5.89	□□□□□ -1.47
KTN1-223	ENST00000555573	PHKG2	P15735	406 aa		5.89	□□□□□ -1.47
KTN1-223	ENST00000555573	CFP	P27918	469 aa		5.89	□□□□□ -1.47
KTN1-223	ENST00000555573	TXK	P42681	527 aa		5.89	□□□□□ -1.47
KTN1-223	ENST00000555573	ALDH1A3	P47895	512 aa		5.89	□□□□□ -1.47
KTN1-223	ENST00000555573	NPEPPS	P55786	919 aa		5.89	□□□□□ -1.47
KTN1-223	ENST00000555573	NKX6-1	P78426	367 aa	Predicted RBP	5.89	□□□□□ -1.47

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms